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5 protocols using rupintrivir

1

EV71 VP1 Antibody Production and Reagent Procurement

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Mouse anti-Flag, mouse anti-HA, mouse anti-β-Actin antibodies and GW5074 were purchased from Sigma-Aldrich (St. Louis, MO). EV71 VP1 polyclonal antibody was prepared by immunizing rabbits with his-tagged VP1 protein. Coelenterazine was obtained from Promega. RIPA lysis buffer and the protease inhibitor phenylmethylsulfonyl fluoride (PMSF) were purchased from Beyotime (Jiangsu, China). Rupintrivir was purchased from Santa Cruz Biotechnology. Lipofectamine® 2000 was purchased from Thermo Fisher Scientific.
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2

Antiviral Efficacy of Rupintrivir and Oseltamivir

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Rupintrivir was purchased from Santa Cruz Biotechnology (Dallas, US). The neuraminidase inhibitor oseltamivir carboxylate (oseltamivir) was obtained from Carbosynth (Compton, UK). Drugs were diluted in DMSO, (final concentration was 0.25%) and used at 0.05 μM, 0.5 μM, 5μΜ and 0.01, 0.1, 1, 10 μM respectively. Antivirals were added concomitantly to viral inoculation in the basal media and renewed all along the infection. Culture media was changed every day.
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3

Apoptosis Induction and Signaling Inhibition

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Actinomycin D (ActoD) (Sigma-Aldrich) was used at a concentration of 5 µg/mL to induce apoptosis. The pan-caspase inhibitor z.vad.FMK (BD Pharmigen) was used at concentration of 20 µM. Caspase inhibitors were purchased from Calbiochem and used at 4 µM (caspase 8 inhibitor) or as indicated. DMSO only controls were used to account for any cellular or viral alterations induced by the drug vehicle. The HRV 3C protease inhibitor, Rupintrivir (Santa Cruz, SC-208317) was added to infected cells at 1 µM as indicated. Anti-RIPK1 (ThermoScientific, 1860909) or Anti-RIPK1 n-terminal (Cell signalling 3493) antibodies were used to detect full length RIPK1 and its cleavage products. Antibodies to caspase 3 (9662), Poly(A)-binding protein (PABP, 4992) and tubulin (2148) were purchased from Cell Signalling Technologies. Antibodies to poly-histidine tag (11922416001) Green Fluorescent protein (GFP, 11814460001) were purchased from Roche. Viral protein expression was detected with anti-VP2 antibody (QED Biosciences, 18758). Rabbit polyclonal antibody to eIF4G (sc11373) was purchased from Santa Cruz.
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4

Inhibition of Innate Immune Signaling

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Pepinh-MyD and Pepinh-TRIF (Invivogen) were used alongside the supplied control peptide at 50μM. 1μM 5Z-7-Oxozaeanol (Sigma), 2μg/ml panepoxydone (Enzo Life Sciences), 200nM IKK Inhibitor VII (Millipore), 1μM Bafilomycin A1 (Santa Cruz Biotechnology), 20nM CID1067700 (Millipore), Epoxomicin (Millipore) was added at 2μM, KU55933 (Millipore) was used at 10μM, Gö6976 (Millipore) at 5μM, DBeQ (BioVision) at 8μM and rupintrivir (Santa Cruz Biotechnology) was used at 2μM, were all added 1h prior to infection.
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5

Evaluation of Antiviral Compounds Against Enteroviruses

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Vero, HeLa, 293 T, LLC-MK2 Derivative, and H1HeLa cells were used as described previously [7 (link)]. EV71 (strain BrCr) (ATCC VR-1775), EV71 (strain H) (ATCC VR-1432) were purchased from ATCC, and EV71 (strain 1095) was kindly provided by Yorihiro Nishimura [22 (link)]. Those were expanded in LLC-MK2 Derivative cells. CVB3 and Human rhinoviruses were used as previously described [7 (link)]. FDA-approved drug library version 2 was purchased from Enzo life science for screen of antiviral compound. Micafungin (Selleckchem), and Rupintrivir (Santa Cruz) were purchased and dissolved in DMSO for further analysis.
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