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10 protocols using lysis buffer

1

Western Blot Analysis of Protein Expression

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The cells were lysed by lysis buffer (Boster, Wuhan, China) containing 1 mM protease inhibitor PMSF (Boster, Wuhan, China). To obtain total protein, the lysate was centrifuged at 13,000 rpm for 15 min at 4°C. The supernatant was the total protein. The total protein was denatured and then separated by SDS-PAGE (8–15%). The separated protein was transferred to a nitrocellulose membrane (Univ-bio, Shanghai, China). The membrane was blocked with a protein free quick blocking solution (Beyotime, Shanghai, China) for 15 min and incubated with specific primary antibodies for 3 h at room temperature. The membrane was washed for 3 times with Tris-buffered saline with 1% Tween 20 (TBST) (Beyotime, Shanghai, China) and incubated with secondary goat anti-rabbit IgG (1:5000, BA1056, Boster, Wuhan, China) for 1 h at room temperature. The membrane was washed again for 3 times with TBST, and the blot was detected by enhanced chemiluminescence solution (Meilune, Dalian, China) and analyzed by Image J (version 1.4.3.67) software. The primary antibodies used are as follows: β-actin (1:5000, bsm-33036M, Bioss, Beijing, China), GRP78 (1:1000, bs-1219R, Bioss, Beijing, China), CHOP (1:500, bs-20669R, Bioss, Beijing, China), STIM1 (1:500, A9764, Abclonal, Wuhan, China), ORAI1 (1:500, A7412, Abclonal, Wuhan, China).
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2

Protein Extraction and Western Blotting

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The lysis buffer (Boster Biological Technology) was added to the prepared tissue and cell samples and was lysed at 4°C for 30 min and nuclear and cytoplasmic protein extraction kits (Beyotime Biotechnology) were used to separate cytoplasmic and nuclear proteins. The lysate was collected and centrifuged at 13,902 g for 10 min. The supernatant protein concentration of the supernatant was determined by a BCA kit (Boster Biological Technology) to ensure the same quality of each sample. After being leveled, the supernatant was fully mixed with loading buffer and boiled for 10 min. Equal amounts of denatured supernatant were transferred to a nitrocellulose membrane after SDS‐PAGE, blocked with 5% skimmed milk powder, and incubated with the corresponding primary antibody and enzyme‐labeled secondary antibody. Protein expression was observed with an enhanced chemiluminescence detection reagent. The results were recorded by a ChemiDoc imaging system (Bio‐Rad) and analyzed quantitatively by ImageJ software.
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3

Western Blot Analysis of p21 in C-kit+ Cells

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C-kit+ cells were lysed in ice-cold lysis buffer (BOSTER, Wuhan, China) containing 1 mM phenylmethanesulfonyl fluoride (PMSF). Western blot analysis was performed with anti-p21 (1 : 1000) and anti-GAPDH (1 : 5000).
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4

Western Blot Protein Quantification

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Cells were homogenized using a lysis buffer (Boster, Wuhan, China) on ice. The total protein was estimated using the BCA protein detection reagent (Boster), and 20 µg of total protein was loaded. Membranes were blocked for 2 h with 5% bovine serum albumin (BSA). After incubation with primary and secondary antibodies (Jackson Immune Research Laboratory), the bands were visualized using enhanced chemiluminescence reagents, and the band intensity was quantified by mean gray value using ImageJ.
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5

Polysaccharide-Mediated Insulin Secretion

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MIN6 cells were seeded in 48-well plate at 5 × 104 cells for 24 h, followed by 0.1 mg/ml polysaccharides or 30 mM KCl for 24 h. Then cells were incubated in KRB balanced buffer (115 mM NaCl, 4.8 mM KCl, 2.5 mM CaCl2, 1.2 mM MgSO4, 1.2 mM KH2PO4, 20 mM NaHCO3, and 16 mM HEPES; pH 7.4) containing 0.2% BSA for 2 h. Medium was then replaced with KRB containing 5.5 mM glucose, 5.5 mM glucose plus 30 mM KCl or 5.5 mM glucose plus 1.0 mg/ml of different polysaccharides for 1 h, respectively. Supernatant was collected and insulin content was measured by ELISA (Innovation Beyond Limits, Germany). The cells were lyzed with lysis buffer (Boster, AR0102) for measurement of total protein content. The insulin secretion was defined as insulin content/protein content.
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6

Protein Extraction and Western Blot Analysis

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Total protein from cells and tissues were extracted using lysis buffer (AR0101/0103, Boster Biological Technology Co. Ltd, Pleasanton, CA). Proteins were separated using 10% SDS-PAGE and then transferred to polyvinylidene fluoride membranes. Before adding specific primary antibodies, membranes were blocked in Tris-buffered saline (pH 7.4, containing 0.05% Tween 20 and 5% non-fat milk) for 1.5 h at room temperature. Protein bands were then detected by incubating with horseradish peroxidase-conjugated secondary antibodies and enhanced chemiluminescence reagent (Bio-Rad). Band densities were quantified using Image J software (Version 1.38e, NIH, Bethesda, MD) and normalized to loading controls.
For co-immunoprecipitation assays, cell extracts prepared following treatments were incubated with indicated antibodies overnight at 4 °C, and immunoprecipitated with protein G-sepharose beads at 4 °C for 2 h. Immunoprecipitation samples were further subjected to immunoblotting for the detection of co-precipitated proteins. Total lysates were also performed for western blot analysis as an input control. Protein interactions were quantified using Image J (NIH).
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7

Western Blotting Analysis of Spinal Cord and HUVEC

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For western blotting, the 0.5 cm spinal cord tissue that obtained from the epicenter of lesion sites and human umbilical vein endothelial cells (HUVECs) were homogenated and lysed by lysis buffer (BOSTER, AR0101) with the presence of protease inhibitor (Beyotime, P1005). Bradford (Ab102535) was used to quantify the concentration of protein in lysates. Equivalent amounts of protein were separated on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (7.5-12.5% SDS-PAGE), and then transferred onto a polyvinylidenefluoride (PVDF) membrane (Bio-Rad, 1620177). Then, the membranes were blocked with 5% skimmed milk in TBST for 2 h at room temperature, and incubated with the following primary antibodies at 4℃ overnight: TRPM2 (1:1000, NB500-242), p-CaMKII (1:1000, sc-32289), CaMKII (1:1000, sc-5306), eNOS (1:1000, sc-376751), NOX2 (1:1000, ab129068), HIF-1α (1:1000, ZEN BIO, 340462), ANG1 (1:5000, ab183701), VEGF (1:1000, sc-7269), Cleaved(C)-caspase3 (1:1000, 9664S), β-catenin (1:1000, ab32572), ZO-1 (1:1000, AF5145), Claudin-5 (1:1000, AF5216), occluding (1:1000, DF7504), P120 (1:1000, AF4684). After washed with TBST, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies for 1h at room temperature. Lastly, the signals were visualized by ChemiDicTM XRS+ ImagingSystem (Bio-Rad, USA), and quantified by Image Lab.
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8

Western Blot Analysis of Cell Cycle Regulators

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For Western blot analysis, the HepG2 cells were transfected as previously described for 48 h. After transfection, the cell total protein was extracted with lysis buffer (Boster Biological Technology, Wuhan, People’s Republic of China). The protein was quantified by the bicinchoninic acid protein assay kit (CWBio, Beijing, People’s Republic of China). An equal amount of protein was separated on the sodium dodecyl sulfate polyacrylamide gel electrophoresis, and then transferred onto polyvinylidene difluoride membrane. The membrane was then blocked and incubated overnight with monoclonal antibodies against CCND2 (1:500), CCNE2 (1:500), and GAPDH (1:600). After washing, the membrane was incubated with horseradish peroxidase-conjugated secondary antibody (1:5,000) for 2 h at room temperature. The bands were visualized using the enhanced chemiluminescence kit (CWBio) and the expression of CCND2 and CCNE2 was normalized with GAPDH housekeeping gene expression.
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9

Protein Expression Analysis in Kidney

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HMCs and kidney tissues were homogenized in lysis buffer (Boster Biotechnology Co., Wuhan, China). Proteins were separated by 10% SDS-PAGE and transferred onto a PVDF membrane (EMD Millipore, Billerica, MA, USA). Primary antibodies against cyclin D1, cyclin E, CDK2, CDK4, p21 (Santa Cruz Biotechnology, Dallas, TX, USA), IL-1β (ab234437; Abcam, Cambridge, UK), and α-smooth A (ab5694; Abcam) and corresponding secondary antibodies (Boster Biotechnology Co., Wuhan, China) were used. Membranes were developed and visualized using the Quantity One analysis system (Bio-Rad, Hercules, CA, USA).
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10

Western Blot Analysis of PI3K/Akt/mTOR Pathway

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The harvested cells were washed with phosphate buffered saline and lysed with lysis buffer (Boster, Wuhan, China) to obtain total cellular protein. Protein concentration was determined by using BCA Protein Assay kit (Boster, Wuhan, China). The protein samples were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a polyvinylidene fluoride (PVDF; Millipore Corporation, MA, USA) membrane through a Bio-Rad II System (Bio-Rad Laboratories, Inc.). Then, the membranes were sealed with 5% skimmed milk powder at room temperature for 1 h and incubated with rabbit monoclonal antibody against PI3K, P-Akt, Akt, P-mTOR, mTOR, and β-actin (1:1000; Cell Signaling Technology, MA, USA) at 4 °C overnight and goat anti-rabbit IgG at room temperature for 1 h. β-actin was used as inner loading control. The epitope was visualized by an ECL detection reagent (Millipore Corporation, MA, USA) according to the manufacturer’s instructions. The gray value was analyzed by Image-ProPlus software (Media Cybernetics, Inc., MD, USA).
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