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Mj research dna engine opticon 2 pcr cycler

Manufactured by Bio-Rad
Sourced in United States

The MJ Research DNA Engine Opticon 2 PCR cycler is a real-time PCR system designed for quantitative gene expression analysis. The device performs thermal cycling, fluorescence detection, and data analysis to enable researchers to accurately measure and quantify nucleic acid targets.

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2 protocols using mj research dna engine opticon 2 pcr cycler

1

Gene Expression Analysis of Immune Markers in AA

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Real-time PCR using the SYBR Green I method [42 (link), 43 (link)] was used to examine the CD3ζ, CD28, CTLA-4, and Cbl-b genes with cDNA obtained from the PBMCs of AA patients and healthy individuals. The CD3ζ and β2M primer sequences and PCR conditions were previously described [26 (link)]. The other primer sequences were as follows: CD28: 5′-GAAACACCTTTGTCCAA GTC-3′ and 5′-GGGGAGTCATGTTCATGTAG-3′, CTLA-4: 5′-GTCAGCCTGCCGAAGC ACT-3′ and 5′-GTCAGCCTGCCGAAGCACT-3′, and Cbl-b: 5′-CCCTGGAATTGACCATTGGG-3′ and 5′-ACTTGCCCAACTCAGTGAGAA-3′. The real-time PCR reactions were performed in a total volume of 25 μl containing approximately 1 μl cDNA, 0.5 μM of each primer pair, and 11.25 μl 2.5× RealMasterMix (Tiangen, Beijing). After an initial denaturation at 95 °C for 15 min, 40 cycles of the following procedure were performed using an MJ Research DNA Engine Opticon 2 PCR cycler (BIO-RAD, Hercules, CA, USA): 15 s at 95 °C and 30 s at 60 °C followed by 1 s at 80 °C for plate reading. The 2(–∆CT) method was used to analyze the genes of interest relative to an internal control gene.
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2

PTEN and A20 Gene Expression Profiling

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The qRT-PCR using the SYBR Green I method was used to examine the PTEN and A20 gene expression levels using cDNA obtained from PBMCs from AA patients and healthy individuals. The primer sequences used for A20 and PTEN gene amplification were listed in Table 2. The β2M which served as an internal control primer sequences and PCR conditions have been previously described.17 (link) The qRT-PCR reactions were performed in a total volume of 25 μl containing 1 μl of cDNA, 0.5 μM of each primer pair, and 11.25 μl of 2.5 × RealMasterMix (Tiangen, Beijing). After an initial denaturation at 95°C for 15 min, 40 cycles of the following procedure were performed using an MJ Research DNA Engine Opticon 2 PCR cycler (BIO-RAD, Hercules, CA, USA): 15 s at 95°C and 30 s at 60°C followed by 1 s at 80°C for plate reading. The 2−ΔCT × 100% method was used to represent the gene expression of interest relative to the internal control β2M. Each sample was tested twice.
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