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83 protocols using dibutyl phthalate

1

Thujone and Alkane Reference Standards

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The pure α/β-thujone and methyl
2-octynoate reference standards, used as internal standards (ISs),
the n-alkanes (from n-C9 to n-C25), used for linear retention indice (ITs)
calibration, and the solvents (cyclohexane, toluene, and dibutyl phthalate—99%
of purity) used in the analyses were all obtained from Merck.
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2

Fabrication of Polymeric Ion-Selective Membranes

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In this experiment, for the fabrication of the membrane, tetrahydrofurane was used as the solvent, and polyvinyl chloride powder (high molecular weight, PVC) was used as the matrix; both were purchased from Flucka. Dioctylphthalate (DOP) and dibutylphthalate (DBP) were procured from Merck, while 2-Nitrophenyl octyl ether (oNPOE) and nitrobenzene (NB) were procured from Flucka, and benzyl acetate (BA) was purchased from Aldrich; all was utilized as sensor plasticizers. The following lipophilic anionic additives were also used: sodium tetraphenyl borate (NaTPB) purchased from Merck, while potassium tetrakis (4-chlorophenyl) borate (KTK), sodium tetrakis (4-fluorophenyl) borate (NaTFPB), and tetradodecylammonium tetrakis (4-chlorophenyl) borate (ETH 500) were purchased from the Flucka company. De-ionized water is used throughout the experiments.
A TiCl3 (Merck) Ethylenediaminetetraacetic acid disodium salt (EDTA) was used as a titrant (Sigma-Aldrich), while nitric acid (HNO3), hydrochloric acid (HCl), and sodium hydroxide (NaOH) (Merck) was used to adjust the pH of the solution. The cationics nitrate and chloride with the highest purity level were purchased from Merck, Fluka, Aldrich, BDH, and HmbG companies, and used after vacuum drying over P2O5.
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3

Synthesis and Characterization of Nanomaterials

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Bisphenol A (≥99%) was obtained from Sigma-Aldrich (Milwaukee, WI, USA). Diethyl phthalate (DEP), di-isobutyl phthalate (DIBP), dibutyl phthalate (DBP), benzyl butyl phthalate (BzBP) and bis-2-ethylhexyl phthalate (DEHP) were purchased from Merck (Darmstadt, Germany). The stock solution of these compounds was prepared in methanol (HPLC grade) and stored at 4 °C. Working solutions were prepared daily in double distilled water from the mixed stock solution. Pyrrole (>97% pure) was purchased from Merck (Darmstadt, Germany) and distilled under N2 pressure for more purification and stored in darkness before use. The silica nanoparticles (12–50 nm diameter) were bought from Degussa Company (Darmstadt, Germany). Sodium chloride (analytical grade) and sodium polyphosphate (analytical grade) were obtained from Fluka (Buchs, Switzerland).
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4

Quantitative Analysis of Phthalate Esters

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Tetrahydrofuran (THF) CAS No:109-99-9, n-Hexane CAS No: 110-54-3, Cyclohexane CAS No: 110-82-7, Diisononyl phthalate (DINP) CAS 28553-12-0, Di-n-octyl phthalate (DNOP) CAS 117-84-0, Di-2-ethylhexyl phthalate (DEHP) CAS: 117-81-7, Diisodecyl phthalate (DIDP) CAS: 26761-40-0, Benzyl butyl phthalate (BBP) CAS: 85-68-7, Dibutyl phthalate (DBP) CAS: 84-74-2, Benzyl Benzoate (BB) (Internal Standart) CAS: 120-51-4, Diisobutyl phthalate (DIBP) CAS: 84-69-5, Dipentyl phthalate (DPENP) CAS: 131-18-0, Dihexyl phthalate (DHEXP) CAS: 84-75-3, Dicyclohexyl phthalate (DCHP) CAS: 84-61-7, and Acetonitrile (ACN) CAS: 75-05-08 were purchased from Merck. The purity of all chemicals used is over 97%.
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5

Osteocyte Lacunae Quantification in Bone

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Femurs were stripped of soft tissue and fixed in 4% PFA for 48 hours before proceeding to dehydration and embedding steps as previously described Qing et al. (2012) (link). Briefly, femurs were dehydrated in graded ethanol and placed into acetone. Subsequently, the femurs were immersed in infiltration solution made of 85% destabilized methyl methacrylate (MMA, Sigma), 15% dibutyl phthalate (Sigma), 1% PEG400 (Sigma), and 0.7% benzoyl peroxide (Polysciences, Inc., Warrington, PA)/acetone until infiltration was complete. The femurs were then placed on pre-polymerized base layers, covered with freshly catalyzed MMA embedding solution (for 100 mL, 85mL MMA, 14mL dibutyl phthalate, 1mL PEG400, 0.33uL DMT, and 0.8g BPO), and incubated under vacuum until the MMA was polymerized. The polymerized blocks were trimmed, sequentially polished to a completely smooth surface, and coated with gold using a sputter coater (Desk V, Denton Vacuum, NJ, USA). Then BSEM (JEOL: JSM-7800F) was performed to image the osteocyte lacunae on the sectioned bone surface at 450X magnification starting 2 mm distal from the growth plate. Six fields from the endosteal and periosteal sides of the cortical bone were taken as described previously Qing and Bonewald (2009) . Using ImageJ (NIH), the images were thresholded for background removal, binarized, and the lacunar area from each sample quantitated.
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6

FITC Skin Painting for Lymph Node Harvesting

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The abdomens of shaved mice were painted with 200 μL 0.5% FITC solution (Sigma-Aldrich, MO, USA) in a 1 : 1 ratio of acetone : dibutyl phthalate (Sigma-Aldrich, MO, USA). Twenty-four hours later, the inguinal, popliteal, axillary, and brachial lymph nodes were harvested. Single-cell suspensions were prepared as described above, and the cells were stained with anti-CD11c (APC, BD Biosciences, CA, USA) for flow cytometric analysis.
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7

Monitoring nitrogen utilization in P. putida

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Overnight cultures of P. putida mt‐2 in M9 medium (OD600nm ~0.8) were diluted 100 times in fresh medium and exposed to vapours of m‐xylene (Sigma‐Aldrich, St. Louis, MO, USA) stemming from a 1:5 dilution in dibutyl phthalate (Sigma‐Aldrich) in sealed flasks, basically as described in Velázquez et al. (2006). At OD600nm ~0.5, cells were washed twice in PBS before resuspending them in N‐free M9 medium supplemented with either 10 mM NO3 or NH4+ as nitrogen source and incubated in the presence of m‐xylene at 28°C with agitation at 150 r.p.m. The bottles were sealed and kept closed during the incubation. At 15 min, 30 min, 1, 3, 5 and 7 h after the shift in nitrogen sources, samples were withdrawn with a sterile syringe through a septum in the cap. Cells were pelleted by centrifugation at 4°C (10,000 g, 2 min), frozen in liquid N2 and immediately stored at −70°C until nucleic acid extraction.
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8

Phthalate Standards Preparation and Analysis

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All PEs standards including dimethyl phthalate (DMP), diethyl phthalate (DEP), dibutyl phthalate (DBP), benzyl butyl phthalate (BBP) and bis(2-ethylhexyl) phthalate (DEHP) were purchased from Sigma Aldrich, Germany. The purities of all PEs were >98%. A 1000 μg mL−1 stock standard solution of each standard was prepared in methanol and stored in glass vials at −20 °C. The standard working solution mixtures (0.001–1.00 μg mL−1) were prepared daily by diluting appropriate aliquots of the stock standard solutions to obtain the required concentrations and stored at 4 °C. HPLC grade methanol, acetonitrile and acetone were purchased from Sigma-Aldrich, Germany. Chloroform (CHCl3), dichloromethane (CH2Cl2), chlorobenzene (C6H5Cl), carbon tetrachloride (CCl4) and sodium chloride (NaCl) were from Merck (Darmstadt, Germany). Deionized water (18.2 mΩ cm) was prepared by Pure Lab Ultra water system (ELGA, High Wycombe, UK) and used in all procedures. Glass tight microsyringes (Hamilton, Nevada, USA) were used for measuring the extracted sediment volume and for the DLLME procedure. All glassware used were rinsed with deionized water then acetone before drying at 300 °C for at least 5 hours. Moreover blank runs were done for each set of samples.
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9

Acetone-Based Protein Extraction and Analysis

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Acetone was purchased from Merk (Darmstadt, Germany). Tetramethylrhodamine isothiocyanate (TRITC), tetraethylrhodamine (Rhodamine B), dibutyl phthalate, phosphate-buffered saline (PBS) tablets (without Mg2+ and Ca2+), trichloroacetic acid (TCA) (>99%), dithiothreitol (DTT) (>99%), ammonium bicarbonate (99%), iodoacetamide (IAA) (>99%) and Clarion mounting medium, were purchased from Sigma-Aldrich Chemie (Steinheim, Germany). [Methyl-3H] thymidine was purchased from Amersham Biosciences (Buckinghamshire, UK). Peptide PMFIVNTNVPR was obtained from Peptide 2.0 (Chantilly, VA). Trypsin was purchased from Roche Applies Science (Mannheim, Germany). Trypsin/Lys-C mix was obtained from Promega (Madison, WI).
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10

Tracking Dendritic Cell Migration

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In order to track the migration of dendritic cells (DCs) from the site of infection to the draining MLNs, uninfected or infected VEGF-Aflox/flox mice were anaesthetized, and their corneas were painted with 2 µl of a 1% FITC solution prepared in 1:1 volume of acetone and dibutyl phthalate (Sigma-Aldrich) at day 6 pi as previously described23 (link). Eighteen hours later, the mice were euthanized, MLN harvested, and processed for flow cytometric analysis of FITC+ DCs.
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