Immunohistochemistry stainings were performed on paraffin-embedded spleens and mLNs from mice. Following deparaffinization, antigen retrieval and blocking, the slides were incubated with the primary antibody diluted 1:200 in TBST with 2% BSA overnight at 4 °C (
CD4 Monoclonal Antibody (4SM95), eBioscience™ (Invitrogen) or
Recombinant Anti-CD8 alpha antibody (Abcam)) and with the secondary antibody diluted 1:1000 in TBS for 1 h at room temperature (
AffiniPure Goat Anti-Rabbit IgG (H + L) (Jackson ImmunoResearch) or
Biotin Goat Anti-Rat Ig Clone Polyclonal (RUO) (554014) (BD Biosciences)). A negative control was included by not adding first antibody on one tissue sample from each slide. Non-overlapping pictures (≥ 5 pictures per mLN (
n ≥ 2) and ≥ 7 pictures per spleen (
n = 3) per staining (CD4+ or CD8+)) of the whole organs were taken with the
Leica DMI4000 B inverted microscope and analysed with ImageJ software (Rasband, W.S., ImageJ, U. S. National Institutes of Health, Bethesda, Maryland, USA,
https://imagej.nih.gov/ij/, 1997–2018.). There, the two color channels were separately thresholded to generate a binary image, and the area fraction of the DAPI staining and the positive staining (CD4+ or CD8a+) were measured. Subsequently, the ratio between the CD4+ or CD8a + area relative to the area of DAPI staining was calculated.
Matthe D.M., Thoma O.M., Sperka T., Neurath M.F, & Waldner M.J. (2022). Telomerase deficiency reflects age-associated changes in CD4+ T cells. Immunity & Ageing : I & A, 19, 16.