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42 protocols using phenazine methosulphate

1

Antioxidant Capacity Evaluation Protocol

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Metaphosphoric acid, 2,2-diphenyl-1-picrylhydrazyl (DPPH),NaOH, nitroblue tetrazolium, dichlorophenol-indophenol (DCPID),2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) di-ammoniumsalt (ABTS•+), 6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxyl acid(Trolox), phenazine methosulphate, ethanol, gallic acid, ethylenediaminetetraaceticacid (EDTA), ferrozine, 2,4,6-tris(2-piridil)-s-triazina(TPTZ) and iron sulphate heptahydrate were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Acetonitrile and acetic acid were HPLC-grade and were purchased from Merck (Darmstadt, Germany). All the phenolic standards were obtained from Extra Syntheses (Genay, France). Solvents and reagents for carotenoid detection were purchasedfrom Panreac (Barcelona, Spain). Other chemicals were of analyticalgrade purchased from Carlo Erba Reagents s.r.l. (Cornaredo, MI, Italy).
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2

Antioxidant Evaluation of Plant Extracts

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Ascorbic acid; aluminum chloride, ferric chloride (FeCl3); Folin-Ciocalteu; bovine serum albumin (BSA); potassium persulphate; 2,2-diphenyl-1-picrylhy-drazyl (DPPH); nitro blue tetrazolium (NBT); phenazine methosulphate (PMS); sulphosalicylic acid; thiobarbituric acid (TBA) and trichloroacetic acid (TCA) were purchased from Sigma chemicals (St. Louis, MO, USA). All other chemicals procured from Sysco Research Laboratory (Mumbai, India). Methanol (99.8%) used were of analytical grade and purchased from Merck Life Science Private Limited, Mumbai, India.
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3

Succinic Dehydrogenase Activity Assay

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Transverse EDL muscle sections were incubated for 3 min at room temperature in a sodium phosphate buffer containing 75 mM sodium succinate (Sigma), 1.1 mM Nitroblue Tetrazolium (Sigma) and 1.03 mM Phenazine Methosulphate (Sigma). Samples were then fixed in 10% formal-calcium and cleared in xylene prior to mounting with DPX mounting medium (Fisher). Densitometry of the samples was performed on a Zeiss Axioskop2 microscope mounted with an Axiocam HRc camera. Axiovision Rel. 4.8 software was used to capture the images.
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4

Hesperidin Modulates Oxidative Stress

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Hesperidin (98%) (HPD) was procured from Himedia Ltd, Mumbai, India. 7,12-dimethylbenz[a]anthracene (DMBA), 12-O-tetradecanoyl-13-phorbol acetate (TPA), 1-chloro-2,4-dinitrobenzene (CDNB), 5,5′-dithiobis-2-nitrobenzoic acid (DTNB), reduced glutathione (GSH), triton X-100, ethylenediaminetetraacetic acid (EDTA), bovine serum albumin (BSA), sodium pyruvate, thiobarbituric acid (TBA), pyruvic acid, phenazine methosulphate (PMS), nitro blue tetrazolium (NBT), and reduced nicotinamide adenine dinucleotide (NADH) were obtained from Sigma Aldrich Chemical Co. (Bangalore, India). Sodium carbonate, carboxymethylcellulose (CMC), trichloroacetic acid, potassium chloride, potassium sodium-tartrate, sodium hydroxide, sodium chloride, sulphuric acid, hydrochloric acid and Tris buffer were supplied by Merck India Limited (Mumbai, India). Antibodies against Rassf7, Nrf2, PARP, NF-κB and β actin were procured from Elabscience Biotechnology Co. Ltd. (New Delhi, India).
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5

Renal Enzyme Activity Assay

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The reaction mixture was prepared in such a way that phenazine methosulphate (Sigma Aldrich, USA) (186 μM) and sodium phosphate buffer (Sigma Aldrich, USA) (0.052 mM) were mixed in a volume of 50 μL and 600 μL respectively. The renal supernatant was prepared by centrifuging the homogenate at 1500 g for 10 min, and then further for 10,000 g for 15 min. This supernatant was added to the previously prepared reaction mixture followed by the addition of 100 μL NADH (780 μM). After 1 min, the reaction was stopped by the addition of 500 μL glacial acetic acid (Sigma Aldrich, USA). The optical density of chromogen was quantitatively estimated at 560 nm on a spectrophotometer, and enzyme activity was calculated such that the enzyme concentration required for inhibiting 50% chromogen in 1 min [29 ].
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6

Extraction and Analysis of Biomolecules

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Ethanol, methanol, ethyl acetate, n-hexane, polyvinylidene fluoride (PVDF) membrane, phosphate-buffered saline tablets, RNAwait solution, tissue protein extraction (T-PER) kit, protein assay dye, sample buffer (2X Laemmli), trizma base, acrylamide, bis-acrylamide, sodium dodecyl sulfate (SDS), ammonium persulfate (APS), tetramethylethylenediamine (TEMED), glycine, skim milk, KCl, NaCl, Tween 20 and H2O2, guaiacol, phenazine methosulphate, glacial acetic acid, sulfosalicylic acid, DTNB ascorbic acid, trichloroacetic acid, and thiobarbituric acid were purchased from Sigma-Aldrich Chemical Co. (St. Louis, MO, USA). All the chemicals and reagents were stored at the required temperature according to the material safety and data sheet for experimental purposes.
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7

Antioxidant Assays and Reagents

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2,2-Diphenyl-1-picrylhydrazyl (DPPH), 2,4,6-tripyridyl-s-triazine (TPTZ), Phenazine methosulphate (PMS), l-ascorbic acid, 2,2-azinobis (3-ethylbenzothiazoline-6- sulphonate) ABTS, 2-thiobarbituric acid (TBA), 1,1,3,3-tetramethoxypropane (TMP) were purchased from Sigma Chemicals Co. St. Louis, MO, USA. Other chemicals were procured from one of the following companies: SRL (New Delhi, India), BDH (Mumbai, India), Hi-media (Mumbai, sIndia) or Merck (Darmstadt, Germany).
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8

Inhibition of C. albicans Biofilms

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The inhibiting effects on C. albicans biofilms were assessed as described previously by71 (link). Briefly, 8 × 104C. albicans cells were added to the wells of a 96 well plate, together with the samples (supernatant, lactic acid, Msp1) or controls (MRS or H2O). After incubation for 24 h at 37 °C, the biofilms were washed twice and then 2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide (90 µl, 1 mg/ml) (Sigma Aldrich) and phenazine methosulphate (10 µl, 0.2 mg/ml) (Sigma Aldrich) were added to the wells. After a second incubation (37 °C, 30 minutes, in the dark), the absorbance at 492 nm was measured using a Synergy HTX multi-mode reader (Biotek, Drogenbos, Belgium).
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9

Glutathione-related Enzyme Assays

10

Nonylphenol and Aucubin Assay Protocol

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Nonylphenol (IUPAC name: 4-(2,4-dimethylheptan-3-yl) phenol; CAS no: 84852-15-3; Purity: 99%) and Aucubin (IUPAC name: 5-Hydroxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-1-yl β-D-glucopyranoside: CAS no: 479-98-1; Purity: ≥ 98.0%) were purchased from Sigma Ald (Germany). All other chemicals used in the study were of analytical grade, such as dimethyl sulfoxide (DMSO), sodium pyrophosphate buffer, Na3PO4 buffer, phenazine methosulphate, glacial acetic acid, NADH, NADPH, sodium acetate buffer, N, N-diethyl-para-phenylenediamine, Ellman’s reagent, 5,5-dithiobisnitrobenzoic acid (DTNB), ascorbic acid, trichloroacetic acid and trichlorobarbituric acid were bought from Sigma Aldrich, Germany. Phosphate buffer saline (PBS) and H2O2 were purchased from Thermo Fisher, Germany.
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