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9 protocols using cym5541

1

Sphingosine-1-Phosphate Signaling Assays

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Sphingosine-1-Phosphate (d18:1; Lipid Maps LMSP01050001) was purchased from Avanti Polar Lipids and Sigma; bovine fatty acid free albumin was from Sigma; W146, CAY10444 and ML-031 were from Cayman Chemical; SEW2871 and CYM5541 were from Tocris Bioscience; LY294002, U0126 and PD98059 were from R&D systems.
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2

Efficient Conversion of hESCs to TSCs

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To convert human ESCs into post-implantation-like TSCs we used an available protocol36 . Briefly, human ESCs were first plated with mTeSR in wells pre-coated with 5 µg mL−1 human recombinant vitronectin (VTN-N; A14700, STEMCELL Technologies) diluted in PBS for 1 h at room temperature. The following three days, cells were cultured in TeSR-E7 media (05914, STEMCELL Technologies) supplemented with 2 µM CYM5541 (4897, TOCRIS), 25 µM SB431542 (72232, STEMCELL Technologies), and 20 ng mL−1 BMP4 (120-05, PeproTech), with fresh media changes each day. Next, 50,000 cells were passaged to wells pre-coated with 1 µg Laminin-521 (LN521, Biolamina) and 3 µg mL−1 VTN-N diluted in PBS for 1 h at room temperature. Converted TSCs (cTSCs) were cultured in human TSC media as defined above. Cells were passaged 3–5 times in their respective media at a 1:4 ratio, with media change every two days, and then used for experimentation.
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3

Modulation of S1P Signaling Pathways

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We used the following reagents: S1P (SL-140; 100 nM, 1 μM; Enzo Life Biosciences), dihydro-S1P (SL-143; 100 nM, 1 μM; Enzo Life Biosciences), FTY-P (B-0721; 1 μM; Echelon Biosciences/Mobitec) (all dissolved in methanol), W146 (3602; 1, 10 μM; Tocris; in NaOH), TY52156 (5328, 1, 10 μM; Tocris; in ethanol), SEW-2871 (H1109D; 1, 10 μM; Biomol; in DMSO), CYM5541 (4897; 1, 10 μM; Tocris; in DMSO), and TNF (R&D Systems, in PBS). Concentrations of FTY-P and S1P were chosen according to pilot experiments for optimal effects on established S1P induced genes, not for equimolar concentrations of S1P and FTY-P. In all experiments, vehicle controls with the respective concentration of solvents were included to control for removal of autocrine trophic factors and cellular stress.
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4

Platelet Activation Pathway Modulation

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Protease activated receptor 1 (PAR-1)-activating peptide (PAR1-AP/SFLLRN-NH2) was from Bachem (Bubendorf, Switzerland). Crosslinked collagen-related peptide (CRP-XL) from University of Cambridge (Cambridge, UK). Sphingosine-1-phosphate, FTY720, SEW2871, CYM5520, CYM5541, CYM50260, A971432, Ex 26, TY52156, JTE-013, CYM50358 hydrochloride, PF543 hydrochloride, N, N-dimethylsphingosine (DMS) were from Tocris (Bristol, UK). The D-erythro-DihydroSphingosine-1-phosphate (DHS1P) was from Sigma Aldrich (Poole, UK). FTY720-Phosphate was from Insight Biotechnology (Wembley, UK). Mouse anti-human PAC-1 conjugated to FITC and mouse anti-human CD62P conjugated to PE were from BD Biosciences (Oxford, UK). Fura-2 AM cell permeant calcium indicator and ActinGreen 488 ReadyProbes Reagent were from ThermoFisher Scientific (Loughborough, UK). Unless indicated, all other materials were from Sigma Aldrich (Poole, UK).
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5

Modulating Schwann Cell Responses via S1PR

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For treatment with S1PR modulators, Schwann cells were seeded at a density of 25,000–35,000 Schwann cells/cm2 on PDL-coated 24-well plates. On day 2 after seeding, Schwann cells were incubated in a Schwann cell medium together with S1PR modulators for another 48 h. Fingolimod (0.1 µM FTY720P, Echelon Biosciences, Salt Lake City, UT, USA) was always used as a positive control. In addition, S1PR agonists were used to specifically modulate receptors S1P1 as well as S1P3-5. All substances were dissolved in DMSO (Sigma-Aldrich) unless otherwise stated: 7.5 µM Ponesimod (S1P1 agonist, Selleckchem, Houston, TX, USA); 15 µM EX26 (S1P1 antagonist, Tocris Bioscience, Bristol, UK); 5 µM CYM5541 (S1P3 agonist, Tocris); 5 µM TY52156 (S1P3 antagonist, Tocris), 1.25 µM, 2.5 µM, 5 µM and 10 µM CYM50260 (S1P4 agonist, Tocris); 1 µM CYM50358 hydrochloride (S1P4 antagonist, Tocris); 1.25 µM, 2.5 µM, 5 µM, and 10 µM A971432 (S1P5 agonist, Tocris, solved in 1N HCl). For each treatment condition, 3–4 wells of a 24-well plate were pooled and used for quantitative real-time-PCR (qRT-PCR) analysis.
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6

Murine Experimental Autoimmune Encephalomyelitis

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Aspartic acid, D-[2,3-3H] was obtained from Perkin Elmer (NET581001MC, Boston, MA, USA). Pertussis toxin was acquired from List Biological Laboratories (#181, Campbell, Santa Clara Country, California, USA) and incomplete Freund’s adjuvant was obtained from Sigma-Aldrich (F5506, Saint Louis, MO, USA). Myelin oligodendrocyte glycoprotein (MOG) was purchased from Espikem (EPK1, Florence, Italy). Mycobacterium tuberculosis (H37Ra) was obtained from DIFCO BACTO Microbiology (241141, Becton, MD, USA). FTY720 was supplied by Novartis Pharma AG (Basel, Switzerland). N,N-dimethylsphingosine (DMS, 4640), sphingosine-1-phosphate (S1P, 1370), CS-2100 (4543, EC50 = 4.0 nM), CYM-5541 (4897, EC50 = 72–132 nM), Ex 26 (5833, IC50 = 0.93 nM), and TY-52156 (5328, Ki = 110 nM) were all purchased from Tocris Bioscience (Bristol, UK).
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7

Selective Agonists for S1P Receptors

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S1P was obtained from Cayman chemicals (BioNordika, Sweden). Selective agonists for S1PR1-5 were, respectively, 5-[4-Phenyl-5-(trifluoromethyl)thiophen-2-yl]-3-[3-(trifluoromethyl)phenyl]1,2,4-oxadiazole (≥ 99%, SEW2871 from Tocris Bio-Techne, Abingdon, UK), 1-[2-[2,5-Dimethyl-1-(phenylmethyl)-1H-pyrrol-3-yl]-2-oxoethyl]-1,6-dihydro-6-oxo-3-pyridinecarbonitrile (≥ 99%, CYM5520, Tocris), N,N-Dicyclohexyl-5-cyclopropyl-3-isoxazolecarboxamide (≥ 97%, CYM5541, Tocris), (2Z,5Z)-5-[[1-(2,4-Difluorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]methylene]-2-[(2-methoxyethyl)imino]-3-methyl-4-thiazolidinone (≥ 98%, CYM 50308, Tocris), 1-[[4-[(3,4-Dichlorophenyl)methoxy]phenyl]methyl]-3-azetidinecarboxylic acid (≥ 99%, A971432, Tocris). Fatty-acid free bovine serum albumin (BSA; Sigma-Aldrich) was used to prepare the vehicle for S1P delivery. Polyethyleneglycol of molecular weight 190–210 (PEG; Sigma-Aldrich #88440) was used as vehicle for S1PR agonists.
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8

Preparation and Storage of Bioactive Lipids

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S1P (Tocris Bioscience, Bio-Techne Corp, MN, USA) was dissolved in methanol:water 95:5 (0.5 mg/mL) and heated to 50 to 60 oC to dissolve. The methanol:water was then evaporated and S1P was stored at −20 oC until use. Working stock solution (1 mM S1P) was diluted in 4 mg/mL bovine serum albumin (BSA). All agonists and antagonists, Ex26, JTE03, TY52156, CYM50358, TY52156, SEW2871, and CYM5541 (Tocris Bioscience, Bio-Techne Corp, MN, USA) were dissolved in DMSO and stored at −20 oC until use. S1PR1-4 antagonists were used at a concentration of 200 nM, as this is above the IC50 dose for all, according to the manufacturer (Ex26 IC50 = 0.93 nM, JTE03 IC50 = 17.6 nM, TY52156 Ki = 110 nM, CYM50358 IC50 = 25 nM). ERK1/2 inhibitor, U0126 (Cell Signaling, MA, USA), was dissolved in DMSO and used at 10 µM concentration based on previously published dose response data (28 (link)) and stored at −20 oC until use.
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9

Sphingosine-1-Phosphate Signaling Pathway Analysis

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Polyclonal anti-COX-1 (#sc-1752) and monoclonal anti-α-tubulin (#sc-23948) antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA). Polyclonal anti-COX-2 (#ab52237) and monoclonal anti-S1P 1 (#ab125074) and anti-S1P 3 (#ab108370) antibodies were obtained from Abcam (Cambridge, MA). Monoclonal anti-phospho-YAP ser127 (#13008) and anti-YAP (#12395) antibodies were obtained from Cell Signaling Technology (Danvers, MA). Horseradish peroxidase-conjugated goat anti-mouse and goat anti-rabbit IgG were obtained from Bio-Rad Laboratories (Hercules, CA). Horseradish peroxidaseconjugated donkey anti-goat IgG was obtained from Santa Cruz Biotechnology. Sphingosine-1-phosphate was obtained from Avanti Polar Lipids (Alabaster, AL) and prepared in PET solution (5% polyethylene glycol, 2.5% ethanol and 0.8% Tween-80) [31] . W146 and CAY10444 were obtained from Cayman Chemical (Ann Arbor, MI). S1P 1 agonist SEW 2871 and S1P 3 agonist CYM 5541 were obtained from Tocris (Minneapolis, MN).
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