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Sulforhodamine b srb reagent

Manufactured by Merck Group
Sourced in United States

Sulforhodamine B (SRB) reagent is a colorimetric assay used to measure cell density and proliferation. It binds to basic amino acid residues in cellular proteins, allowing the quantification of total cellular protein as an indicator of cell number or cell growth.

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6 protocols using sulforhodamine b srb reagent

1

Cytotoxicity evaluation of PD173074 and olaparib

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PD173074 (Sigma-P2499, HPLC ≥ 96%) and olaparib (AZD2281/KU0059436, #S1060, HPLC ≥ 99.7%) were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA) and Selleck Chemicals (Antibody International Inc. Jhubei City, Hsinchu County, Taiwan), respectively. Stock solutions (1 mM) of each drug were prepared by dissolution in phosphate-buffered saline (PBS) and stored in a dark room at −20 °C. PBS, dimethyl sulfoxide (DMSO), sulforhodamine B (SRB) reagent, trypsin/ethylenediaminetetraacetic acid, Tris aminomethane (Tris) base, and acetic acid were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Dulbecco’s modified Eagle’s medium (DMEM) was purchased from Invitrogen (Invitrogen Life Technologies, Carlsbad, CA, USA).
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2

BX-795 Hydroxide Compound Preparation

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BX-795 hydroxide (#SML0694, HPLC ≥ 98%) was purchased from Sigma Aldrich Co. (St. Louis, MO, USA). Stock solutions of 1 mM were dissolved in dimethyl sulfoxide (DMSO) at 15 mg/mL, and stored in dark room at −20 °C. Phosphate buffered saline (PBS, #P7059), dimethyl sulfoxide (DMSO, #D2650), sulforhodamine B (SRB) reagent (#230162), trypsin/ethylenediaminetetraacetic acid (Trypsin-EDTA, #T4049) solution, trisaminomethane (Tris) base (#93352) and acetic acid (#695092) were purchased from Sigma Aldrich Co. (St. Louis, MO, USA), while GibcoTM Dulbecco’s modified Eagle’s medium (DMEM) was purchased from Invitrogen (#11966025, Invitrogen Life Technologies, Carlsbad, CA, USA).
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3

Cell Viability Assay using SRB Reagent

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The cell viability assay was performed using sulforhodamine B (SRB) reagent (Sigma-Aldrich, Taipei, Taiwan), as described previously [88 (link)]. Briefly, DLD-1 and HCT116 cells were harvested at 9095% confluency, and 8000 cells/well were seeded in 96-well plates for a period of 24 h, followed by dose-dependent concentration treatment of LCC-21. After 48 h of treatment, 10% trichloroacetic acid (TCA) was added to cells and they were stored at 4 °C for one hour. Cells were further washed twice with distilled water and stained with 0.4% SRB, then stored for 30 min at room temperature. Excess stain was removed from the plates by washing with 1% acetic acid twice. The plates were air-dried overnight. The protein-bound stain was solubilized with a 20 mM Tris-buffer solution for 15 min on an orbital shaker. The absorbance was measured with a microplate reader at a wavelength of 560 nm (Molecular Devices, Sunnyvale, CA, USA).
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4

Molecular Mechanisms of Cell Apoptosis

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Dulbecco’s modified eagle medium (DMEM), fetal bovine serum (FBS), 2.5% trypsin, and penicillin-streptomycin were obtained from Gibco BRL Company (Grand Island, NY, USA). The protease inhibitor cocktail, RIPA lysis buffer, the reagent of Coomassie PlusTM Protein Assay, and the enhanced chemiluminescence (ECL) reagent were purchased from Thermo Fisher Scientific (Rockford, IL, USA). The apoptosis assay kit was purchased from Bio-Legend (San Diego, CA, USA). The sulforhodamine B (SRB) reagent was obtained from Sigma-Aldrich, St. Louis, MO, USA. The propidium iodide (PI) dye, and primary antibody for anti-β-actin were purchased from Sigma-Aldrich (St. Louis, MO, USA). The primary antibodies for Western blot analysis (cyclin D1, cyclin E1, CDK-2, CDK-4, caspase-9, cleaved-caspase-3, Bcl-2, Bcl-xl, and HRP-conjugated anti-mouse or rabbit-IgG) were obtained from Cell Signaling Technology (Beverly, MA, USA). The primary antibody of PARP-1 was purchased from Santa Cruz Biotechnology (Dallas, TX, USA). The MitoViewTM 633 dye staining kit was obtained from Biotium (Fremont, CA, USA).
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5

Molecular Mechanisms of Phytochemical-Induced Effects

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Fetal bovine serum (FBS), Roswell Park Memorial Institute (RPMI)-1640 and penicillin-streptomycin were purchased from Gibco BRL Company (Grand Island, NY, USA). Modified Radioimmunoprecipitation assay (RIPA) lysis buffer, protease inhibitor cocktail, Commasie Plus™ Protein Assay Reagent, and chemiluminescent immunoblotting reagent were obtained from Thermo Fisher Scientific (Rockford, IL, USA). Syringic acid, pyrogallol, p-coumaric acid, catechin, gallic acid, protocatechuic acid, chlorogenic acid, caffeic acid, vanillic acid, ferulic acid, and ellagic acid, Sulforhodamine B (SRB) reagent, mitochondria membrane potential kit (JC-10 dye), propidium iodide (PI) and anti-β-actin antibody were obtained from Sigma-Aldrich (St. Louis, MO, USA). Primary antibody of PARP-1 was purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Primary antibodies of cyclin D1, cyclin E, CDK-4, CDK-6, cleaved-caspase3, phospho-GSK-3β, GSK-3β (Ser9), phospho-β-catenin, β-catenin, phospho-Akt, Akt, and horseradish peroxidase-conjugated anti-mouse or rabbit-IgG were purchased from Cell Signaling Technology (Beverly, MA, USA). Apoptosis assay kits were obtained from Bio-Legend (San Diego, CA, USA).
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6

Apoptosis Assay Protocol

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Fetal Bovine Serum (FBS), trypsin-EDTA, Penicillin-Streptomycin-Amphotericin B, tetramethylrhodamine methyl ester (TMRM þ ), MitoSOX Red, calcein acetoxymethyl ester (Calcein-AM, or CAM), and Propidium Iodide (PI), were purchased from Invitrogen (Carlsbad, CA, USA). Dulbecco's Modified Eagle's Medium (DMEM)-high glucose (D5648) and DMEM without glucose (D5030), radio immunoprecipitation assay (RIPA) buffer, DLdithiothreitol (DTT), protease inhibitor cocktail (PIC), phosphatase inhibitor cocktail 2, pNA, Ponceau S, Bradford Reagent, NEF, dimethyl sulfoxide (DMSO), sulforhodamine B (SRB) reagent and Hoechst 33342 were obtained from Sigma-Aldrich (St. Louis, MO, USA). Pierce BCA assay kit was purchased from ThermoFisher Scientific (Lafayette, CO, USA). The molecular weight standard (Catalog# MB09002) was purchased from NZYTech (Lisbon, Portugal). BSA used as a blotting-grade blocker and 2x Laemmli Sample Buffer were purchased from Bio-Rad (Hercules, CA, USA). Caspases-3 and -9 substrates were purchased from Calbiochem (San Diego, CA, USA). All other reagents and chemical compounds used were of the highest degree of purity commercially available.
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