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4 protocols using anti igg pecy7

1

Sorting SARS-CoV-2 Spike-Specific B Cells

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Fluorescence-activated cell sorting of cryopreserved PBMCs was performed on a BD FACS Melody. Sorting baits (SARS-CoV-2 Spike) was pre-complexes with the streptavidin flurophore at a 1:4 molar ratio prior to addition to cells. PBMCs were stained with live/dead (fixable Aqua Dead, Thermofisher), anti-CD3-APC/Cy7 (Biolegend), anti-CD8-APC-Cy7 (Biolegend), anti-CD14-BV510 (Biolegend), anti-CD19-PerCP-Cy5.5 (Biolegend), anti-IgM-PE (Biolegend), anti-IgD-Pacific Blue (Biolegend) and anti-IgG-PeCy7 (BD) and Spike-Alexa488 (Thermofisher Scientific, S32354) and Spike-APC (Thermofisher Scientific, S32362). Live CD3/CD8CD14CD19+IgMIgDIgG+Spike+Spike+ cells were sorted into individual wells containing RNase OUT (Invitrogen), First Strand SuperScript III buffer, DTT and H2O (Invitrogen) and RNA was converted into cDNA (SuperScript III Reverse Transcriptase, Invitrogen) using random hexamers following the manufacturer’s protocol.
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2

Isolation and Profiling of Memory B Cells

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PBMC were isolated via a standard Ficoll gradient. Informed consent in writing was obtained from each donor. B cells were enriched from PBMC using Dynabeads Untouched Human B cells Kit (Thermo Fisher). For further analysis, B cells were incubated with human Fc block (BD Biosciences) for 10’ at RT, followed by biotinylated HBsAg for 30’ on ice (HBsAg by Roche Diagnostics; EZ-Link Sulfo-NHS-Biotinylation kit, Thermo Fisher). Memory B cell staining: 30’ on ice in PBS+0.5% BSA with live-dead stain (Thermo Fisher), anti-CD19-eF450 (eBioscience), anti-IgG-Pe-Cy7 (BD) and Streptavidin-APC (eBioscience). Cells were analyzed via flow cytometry on Cytoflex S (Beckman Coulter) or sorted with MoFlo II (Beckman Coulter) into lysis buffer, i.e. PBS+12U RNasin (Promega), 100 mM DTT (Thermo Fisher). PCR plates were sealed and stored at -80°C. IgG gene identification via PCR and sequencing from single B cells was performed as described elsewhere (16 (link)).
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3

SARS-CoV-2 Antigen-Specific B Cell Sorting

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Fluorescence-activated cell sorting of cryopreserved PBMCs was performed on a BD FACS Melody as previously described (Graham et al., 2021 (link)). Sorting baits (SARS-CoV-2 Spike and RBD) was pre-complexed with the streptavidin fluorophore at a 1:4 molar ratio prior to addition to cells. PBMCs were stained with live/dead (fixable Aqua Dead, Thermofisher), anti-CD3-APC/Cy7 (Biolegend), anti-CD8-APC-Cy7 (Biolegend), anti-CD14-BV510 (Biolegend), anti-CD19-PerCP-Cy5.5 (Biolegend), anti-IgM-PE (Biolegend), anti-IgD-Pacific Blue (Biolegend) and anti-IgG-PeCy7 (BD) and Spike-Alexa488 (Thermofisher Scientific, S32354) and Spike-APC (Thermofisher Scientific, S32362) or RBD-Alexa488 and RBD-APC. Live CD3/CD8-CD14-CD19+IgM-IgD-IgG+Spike+Spike+ or CD3/CD8-CD14-CD19+IgM-IgD-IgG+RBD+RBD+ cells were sorted using a BD FACS Melody into individual wells containing RNase OUT (Invitrogen), First Strand SuperScript III buffer, DTT and H2O (Invitrogen) and RNA was converted into cDNA (SuperScript III Reverse Transcriptase, Invitrogen) using random hexamers (Bioline Reagents Ltd) following the manufacturer’s protocol.
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4

Multiparametric Flow Cytometry of SARS-CoV-2 Spike Antibodies

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Flow cytometry of cryopreserved PBMCs was performed on a BD FACS Melody as previously described. SARS-CoV-2 Wuhan-1 Spike was pre-complexed with the streptavidin fluorophore (Alexa-488) at a 4:1 molar ratio prior to addition to cells. PBMCs were incubated with Fc block for 15 minutes at 4°C. PBMCs were stained with anti-CD3-BV510 (Biolegend), anti-CD19-PerCP-Cy5.5 (Biolegend), anti-IgD-Pacific Blue (Biolegend), anti-CD27-BV785 (Biolegend), anti-CD38-APC-Cy7 (Biolegend), anti-CD20-APC (Biolegend), anti-IgG-PE-Cy7 (BD Biosciences), anti-IgM-PE (Biolegend) and Spike-Alexa Fluor 488 for 1 hour at 4°C. PBMCs were washed with PBS and stained with live/dead for 1 hour at 4°C.
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