The largest database of trusted experimental protocols

Block ittm adenoviral rnai expression system

Manufactured by Thermo Fisher Scientific
Sourced in United States

The BLOCK-iTTM Adenoviral RNAi Expression System is a tool designed for the expression of short hairpin RNA (shRNA) in mammalian cells. It provides a method for the efficient delivery and expression of shRNA sequences to study gene function.

Automatically generated - may contain errors

3 protocols using block ittm adenoviral rnai expression system

1

Adenoviral Knockdown in Mouse Hippocampus

Check if the same lab product or an alternative is used in the 5 most similar protocols
m-TERC53 and m-TERC53r expressing vectors were constructed with BLOCK-iTTM U6 RNAi Entry Vector Kit (Invitrogen) according to the supplier’s instruction, and the virus were produced, amplified and purified with BLOCK-iTTM Adenoviral RNAi Expression System (Invitrogen) according to the supplier’s instruction. Mice were maintained under standard housing conditions, and anaesthetized with Isoflurane (3 mL/h for 10 min to induce anaesthetization, 1.2 mL/h to maintain the anaesthetized state). Mice were placed in the stereotaxic apparatus and a small hole was drilled at each bilateral injection location. 0.2 μL virus (0.1 OD) was injected per site using a Hamilton microsyringe (0.02 μL/min) into the dorsal DG using the following coordinates: anterioposterior = − 2.2 mm from bregma; lateral = ± 1.5 mm; ventral = 2.3 mm. The skin incision was closed carefully after adenoviral injection to minimize inflammation. Injection needles were left in place for 5 min before and after injection to ensure right location and even distribution of the virus.
+ Open protocol
+ Expand
2

PALB2 Lentiviral Overexpression and Knockdown

Check if the same lab product or an alternative is used in the 5 most similar protocols
Full‐length PALB2 cDNA was cloned into pRDI lentiviral expression vector between ClaI and EcoRI site. The lentivirus was expressed in 293T cells using FuGENE6 Transfection Reagent (Roche Applied Sciences, Penzberg, Germany). MDA‐MB‐231 cells were infected with the virus in the presence of 8 μg·mL−1 polybrene and were selected with puromycin. BLOCK‐iTTM Adenoviral RNAi Expression System (Invitrogen, Carlsbad, CA, USA) was used to transiently express short hairpin RNA (shRNA) in MDA‐MB‐231 cells. The PALB2 RNAi sequences were determined by using BLOCK‐iTTM RNAi Designer (Invitrogen) and was cloned into the pENTRTM/U6 vector. The following two shRNAs were selected for human PALB2: sense 5′‐CAC CGC TTG CGA AGA TGT AGT TTC TCG AAA GAA ACT ACA TCT TCG CAA GC‐3′ and antisense 5′‐AAA AGC TTG CGA AGA TGT AGT TTC TTT CGA GAA ACT ACA TCT TCG CAA GC‐3′; and sense 5′‐CAC CGC AGC AGC AAT CTT GAC TTC TCG AAA GAA GTC AAG ATT GCT GCT GC‐3′, anti‐sense 5′‐AAA AGC AGC AGC AAT CTT GAC TTC TTT CGA GAA GTC AAG ATT GCT GCT GC‐3′.
+ Open protocol
+ Expand
3

Knockdown of SHARPIN, HOIL-1L, and HOIP in Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the individual knockdowns of mouse SHARPIN, HOIL-1L, and HOIP, we generated each shRNA expressing recombinant adenoviruses using the BLOCK-iTTM U6 RNAi Entry Vector Kit and the BLOCK-iTTM Adenoviral RNAi Expression System (Invitrogen). The top and bottom strands used to generate each of the shRNA expressing recombinant adenoviruses are as follows: SHARPIN shRNA, top strand 5′-CACCGCGGAAGCTGCAATTGATAGCCGAAGCTATCAATTGCAGCTTCCGC-3′, bottom strand 5′-AAAAGCGGAAGCTGCAATTGATAGCTTCGGCTATCAATTGCAGCTTCCGC-3′; HOIL-1L shRNA, top strand 5′-CACCGCCTATCTCTACCTGCTGTCACGAATGACAGCAGGTAGAGATAGGC-3′, bottom strand 5′-AAAAGCCTATCTCTACCTGCTGTCATTCGTGACAGCAGGTAGAGATAGGC-3′; HOIP shRNA, top strand 5′-CACCGGTCTTCTCAGCTCTCCAATACGAATATTGGAGAGCTGAGAAGACC-3′, bottom strand 5′-AAAAGGTCTTCTCAGCTCTCCAATATTCGTATTGGAGAGCTGAGAAGACC-3′.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!