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6 protocols using 15 f2t isop

1

Isoprostanes Standards and Synthesis

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Isoprostanes’ standards were from Cayman Chemical Company (Ann Arbor, Michigan, USA) (15(R)-15-F2t-IsoP, PGE2, 2,3-dinor-iPF2 αIII, 15-keto-15-E2t-IsoP, 15-keto-15-F2t-IsoP, 15-E2t-IsoP, 15-F2t-IsoP, 5-F2t-IsoP, PGF, 1a,1b-dihomo-PGF), or synthesized at the Institute of Biomolecules Max Mousseron (IBMM) (Montpellier, France) by Dr Durand’s team (4(RS)-F4t-NeuroP, 10-epi-10-F4t-NeuroP, 14(RS)-14-F4t-NeuroP, Ent-7(RS)-F2t-dihomo-IsoP, 17-F2t-dihomo-IsoP, 17-epi-17-F2t-dihomo-IsoP, 17(RS)-10-epi-SC-Δ15-11-dihomo-IsoF, 7(RS)-ST-Δ8-11-dihomo-IsoF) [28 (link)].
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2

Quantification of Isoprostane and Neurosteroid Biomarkers

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The isoprostanes’ standards 5-F2t-IsoP, 2,3-dinor-15-epi-15-F2t-IsoP, 15(R)-15-F2t-IsoP, 15-F2t-IsoP, 15-E2t-IsoP, 15-keto-15-E2t-IsoP, 15-keto-15-F2t-IsoP, prostaglandins PGE2, PGF, and 1a,1b-dihomo-PGF and deuterated internal standard (IS) PGF-d4 were from Cayman Chemical Company (Ann Arbor, Michigan, USA). The standards of 10-epi-10-F4t-NeuroP, d4-10-epi-10-F4t-NeuroP, 4(RS)-4-F4t-NeuroP, 14(RS)-14-F4t-NeuroP, 7(RS)-ST8-11-dihomo-IsoF, 17(RS)-10-epi-SC-Δ15-11-dihomo-IsoF, 17-epi-17-F2t-dihomo-IsoP, 17-F2t-dihomo-IsoP, and ent-7(RS)-7-F2t-dihomo-IsoP, were synthesized at the Institute of Biomolecules Max Mousseron (IBMM) (Montpellier, France) by Professor Durand’s team25 (link).
The calibration curves were prepared by serial dilutions in H2O (pH 3):CH3OH (85:15 v/v) with CH3COOH 0.01%, in concentrations from 300 nmol L−1 to 0.004 nmol L−1 of each analyte.
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3

Quantification of F2-Isoprostanes in HLM

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15-F2t-IsoP and [2H4]-15-F2t-IsoP were obtained from Cayman Chemical. 5-epi-5-F2t-IsoP was generous gift from the laboratory of Thierry Durand (University of Montpellier, Montpellier, France). General lab supplies and solvents were obtained Fischer-Scientific (Hampton, NH). All solvents were of LC/MS grade. B-One® was obtained from Kura Biotech (Puerto Varas, Los Lagos, Chile). Human liver microsomes (HLM) were obtained from BioIVT, LLC (Westbury, NY USA). Reagents for HLM incubations were purchased from Sigma-Aldrich (St. Louis, MO USA). Recombinant UDP-glucuronosyltransferase (UGT) isoforms and UGT reaction mix reagents were obtained from (GENTEST, Woburn, MA USA).
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4

Salivary Biomarkers of Oxidative Stress

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Commercially available prostaglandin E 2 (PGE 2 ), F 2 -and E 2 -isoprostanes (IsoPs), 15-F 2t -IsoP and 15-E 2t -IsoP (purity ≥99%) were from Cayman Chemical (Michigan, USA).
Not commercially available F 4 -NeuroPs (20-F 4t -NeuroP, 20-epi-F 4t -NeuroP), F 2 -dihomo-IsoPs (ent-7(R,S)-7-F 2t -dihomo-IsoP, 17-F 2t -dihomo-IsoP) and F 2 -dihomo-IsoF (7(R,S)-ST-Δ 8 -11-dihomo-IsoF) were synthesized at the Institut des Biomolecules Max Mousseron (IBMM) (Montpellier, France) according to procedures reported elsewhere [41] (link)[42] (link)[43] (link)[44] (link).
All the solutions and saliva samples were stored in sterile polypropylene containers from Eppendorf (Milan, Italy).
Phenex™-RC syringe filters (0.2 μm regenerate cellulose, 4 and 15 mm of diameter) were from Phenomenex (California, USA).
The eVol® XCHANGE analytical syringe (20-500 μL) and microextraction by packed sorbent silica-C18 Barrel Insert and Needles (BINs) were purchased from SGE Analytical Science (Melbourne, Australia).
Salivette roll-shaped polyester swabs were purchased from Sarstedt (Nümbrecht, Germany).
A Macherey Nagel Pehanon narrow range (5.2 < pH < 8.1) pH paper strips (Düren, Germany) with a resolution of 0.3 pH units was used to estimate the salivary pH.
An Amicon Ultra-0.5 mL Centrifugal Filters (Darmstadt, Germany) with a cut-off of 3 kDa was used to purify saliva samples.
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5

Investigating Cellular Response to Bleomycin and 15-F2t-IsoP

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Cells were seeded at a density of 6×10 4 cells/ml in DMEM supplemented with 10% FBS and allowed to grow to confluence. Twenty-four hours before the treatment, the medium was changed to serum-free DMEM. Cells were then treated with either BLM (0.1-100 mU/ml) or with 15-F2t-IsoP (Cayman Chemical, USA) in the range of concentrations (10 -14 -10 -12 M). A stock solution of 15-F2t-IsoP (1 mg/ml in ethanol) was diluted to a concentration of 10 -5 M and then further diluted to final concentrations with DMEM.
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6

Quantification of Isoprostanes and Prostaglandins

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Isoprostanes' standards of 15(R)-15-F 2t -IsoP, 2,3-dinor-15-epi-15-F 2t -IsoP, 5-F 2t -IsoP, 15-keto-15-E 2t -IsoP, 15-keto-15-F 2t -IsoP, 15-E 2t -IsoP, 15-F 2t -IsoP, the prostaglandins PGE 2 and PGF 2α , as well as the deuterated internal standard (IS) PGF 2α -d 4 were purchased from Cayman Chemical Company (Ann Arbor, Michigan, USA). The standards of 7(RS)-ST-Δ 8 -11-dihomo-IsoF, 10-epi-10-F 4t -NeuroP, d 4 -10epi-10-F 4t -NeuroP, 4(RS)-F 4t -NeuroP, 17-epi-17-F 2t -dihomo-IsoP, 17-F 2t -dihomo-IsoP, 17(RS)-10-epi-SC-Δ 15 -11-dihomo-IsoF, Ent-7(RS)-7-F 2t -dihomo-IsoP, and 14(RS)-14-F 4t -NeuroP were synthetized by Durand's team at the Institute des Biomolécules Max Mousseron (IBMM) (Montpellier, France) (Fig. S1 in Electronic Supplementary material) [34] . Methanol (LC-MS grade) and n-heptane (analytical grade) were obtained from J.T. Baker (Avantor Performance Materials B.V., The Netherlands). Chlorhydric acid and acetic acid glacial (99.5%) were purchased from Panreac (Castellar del Vallés, Barcelona, Spain). Ammonium acetate, sodium acetate, sodium hydroxide, and β-glucuronidase (type H2, from Helix pomatia) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Creatinine assay (MicroVue creatinine EIA) from Quidel Corporation (San Diego, CA, USA).
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