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20 protocols using ripa solution

1

Western Blot Analysis of p53 and GAPDH

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HS 722.T and RKO cell pellets were resuspended in RIPA solution (Sangon, Shanghai, China) at a concentration of 1 ml RIPA solution per 105 cells. Protein samples were denatured and subjected to 12% SDS-PAGE gel electrophoresis. Proteins were transferred to PVDF membranes. After blocking (5% non-fat milk for 2 h at 25ºC), rabbit polyclonal primary antibodies of GAPDH (1: 1300, ab181602, Abcam) and p53 (1: 1300, ab131442, Abcam) were used to incubate membranes at 4°C for at least 12 h. After that, goat anti-rabbit lgG-HRP secondary antibody (1: 1000, MBS435036, MyBioSource) was used to further incubate with membranes for 2 h at 25°C. Signals were developed by incubating with ECL solution (Sigma-Aldrich, USA) for 15 min at room temperature, and data were processed using Image J 1.48 software.
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2

Western Blot Analysis of PTEN Protein

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At 24 h post-transfection, C666-1 and 13-9B cells were harvested, and 1×105 cells were mixed with 1 ml RIPA solution (Sangon Biotech Co., Ltd.) to extract total proteins. The BCA method (Sigma-Aldrich; Merck KGaA) was used to measure protein concentration. Proteins were incubated with sample buffer and boiled for 5 min to denature the proteins. Protein samples (30 µg per lane) were subsequently loaded on a 12% gel, resolved using SDS-PAGE and transferred onto PVDF membranes. Membranes were blocked with PBS containing 5% skimmed milk at 22°C for 2 h. Membranes were incubated with rabbit polyclonal primary antibodies against PTEN (1:1,200; cat. no. ab31392; Abcam) or GAPDH antibody (1:900; cat. no. ab9485; Abcam) at 4°C overnight, and subsequently with horseradish peroxidase-conjugated goat anti-rabbit immunoglobulin G secondary antibody (1:1,200; cat. no. MBS435036; MyBioSource, Inc.) at 22°C for 2 h. Enhanced chemiluminescence reagent (Sigma-Aldrich; Merck KGaA) was used to detect the signal on the membrane. Densitometry analysis was performed using Image J version 1.46 (National Institutes of Health). GAPDH was used as the loading control.
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3

Quantifying GAPDH and p53 Protein Levels in h1RPE7/ARPE-19 Cells

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h1RPE7/ARPE-19 cells were counted, and cell pellets containing 2×105 cells were resuspended in 1 mL RIPA solution (Cat# C500007-0010, Sangon) to perform total protein extractions. Protein samples were boiled in water for 5 min, followed by separation with 10% SDS-PAGE gel electrophoresis. The separated proteins were transferred onto poly(vinylidene fluoride) (PVDF) membranes, followed by incubation with rabbit polyclonal primary antibodies against GAPDH (ab9485, 1:800, Abcam) and p53 (ab131442, 1:800; Abcam) for at least 12 h at 4°C. The membranes were further incubated with horseradish peroxidase-labeled IgG secondary antibody (1:800, MBS435036, MyBioSource) for 2h at 22 °C. Electrochemiluminescence (ECL) substrate (Sigma-Aldrich, USA) was dropped onto the PVDF membranes to produce signals. Data were analyzed using Image J v1.46 software.
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4

TGF-β1 Expression Quantified by Western Blot

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Total proteins in 3×104 cells of each transfection group were isolated by RIPA solution (Sangon). BCA assay (Sangon) was performed to quantify protein samples. After proteins were denatured at 95°C for 10 min, proteins were separated by performing electrophoresis (12% SDS-PAGE gel). PVDF membrane was used to transfer proteins and 5% non-fat milk (PBS) was used for blocking. After that, membranes were first incubated with anti-GAPDH (1: 1000, ab37168, Abcam) and anti-TGF-β1 (1: 1000, ab92486, Abcam) rabbit primary antibodies for 18 h at 4°C. Following that, IgG-HRP (1: 1500, MBS435036, MyBioSource) goat secondary antibody was used to further incubation for 2 h at 24°C. Finally, ECL (Sigma-Aldrich, USA) was used for signal production and all data were normalized using Image J v1.48 software.
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5

Protein Extraction and Western Blot Analysis

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To extract total protein, transfected cells were lysed with radioimmunoprecipitation assay (RIPA) solution (Sangon Biotech Co. Ltd., Shanghai, China) supplemented with a protease inhibitor cocktail (Sangon Biotech Co. Ltd.) and phenylmethanesulfonyl fluoride (Sangon Biotech Co. Ltd.). After total protein quantification using a BCA Protein Assay Kit (Sangon Biotech Co. Ltd.), equal amounts of protein were subjected to 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) electrophoresis and transferred to polyvinylidene fluoride membranes. The membranes were blocked with 5% skim milk at room temperature for 2 h and subsequently incubated overnight at 4°C with primary antibodies against SP1 (Cat. No. b124804; Abcam, Cambridge, MA, USA) or GAPDH (Cat. No. ab128915; Abcam). The primary antibodies were used with a dilution of 1:1,000. Next, a goat anti-rabbit IgG horseradish peroxidase-conjugated secondary antibody (Cat. No. ab6721; Abcam) was incubated with the membranes at room temperature for 2 h. Finally, the protein signals were visualized using the ECL Prime Western Blotting Detection Reagent (GE Healthcare, Chicago, IL, USA).
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6

Protein Expression Analysis in CSCC Cells

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RIPA solution (Sangon) was mixed with CSCC cells (1 mL per 106 cells) to extract total proteins. A BCA kit (Sangon) was used to measure the concentrations of protein samples. Protein samples were then incubated in boiled water for 5 min to denature proteins. To separate proteins, 12% SDS-PAGE gel was used to carry out electrophoresis. After electrophoresis, proteins were transferred to PVDF membranes, followed by blocking at 23°C for 1 h in PBS containing 5% non-fat milk. The first blotting was performed using GAPDH (1:1300, ab37168, Abcam) and EPB41L3 (1:1300, ab154071, Abcam) rabbit primary antibodies (4 °C for 12 h). The second blotting was performed using HRP goat anti-rabbit (IgG) antibody (1:1000; ab6721; Abcam, 23 °C for 2 h). RapidStep™ ECL detection reagent (EMD Millipore) was dropped onto the membranes to develop signals. All gray values were normalized using Image J v1.48 software.
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7

Quantitative Protein Analysis by Western Blot

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A total of 4 × 105 cells were mixed with 1 ml RIPA solution (Sangon) to extract protein. Following denaturing in boiled water for 5 min, 10% SDS-PAGE gel was used to perform electrophoresis. PVDF membranes were used to perform gel transfer and blocking was performed for 2 h at room temperature in 5% non-fat milk. Blotting was performed using rabbit p-AKT (1:1200, ab18206, Abcam), AKT (1:1200, ab126811, Abcam), PI3K (1:1200, ab182651, Abcam), PI3K (1:1200, ab5451, Abcam), cytochrome c (1: 1200, ab90529, Abcam), and PI3K (1:1200, ab9485, Abcam) primary antibodies (overnight at 4°C) and goat IgG-HRP secondary antibody (1:800, MBS435036, MyBioSource). ECL (Sangon) was used to develop signal. Gray values were processed using Image J V1.6 software. Three independent replicates were set for each experiment.
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8

Gastric Cancer Protein Lysis and Analysis

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The total protein was lysed from gastric cancer cells using RIPA solution (Sangon, China) and quantitated with BCA kit (Beyotime, China). 20 μg cell total protein was heated at 105°C for 5 minutes and then separated by SDS-PAGE. The separated gels were transferred onto a PVDF membrane (Millipore, US) using a Bio-Rad machine (US). The transferred PVDF membrane was incubated with 5% nonfat milk in PBS containing 0.05% Tween-20 (PBST) for 1 hour and then incubated with primary antibody at 25°C for 4 hours. After being washed four times with PBST, the membrane was incubated with horseradish peroxidase (HRP) conjugated secondary antibody for another 2 hours. Detection was performed by using a chemiluminescent ECL detection kit (Thermo Fisher, US). The primary antibodies of β-actin, HDAC2, caspase 3, and the HRP conjugated second antibodies were purchased from Santa Cruz (US).
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9

Quantitative Analysis of Survivin Expression

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UWB1.289 cells were collected at 24 h post-transfection, and numbers were counted. Following that, total proteins in 5 × 105 UWB1.289 cells were extracted using RIPA solution (Sangon, USA). After denaturing for 5 min in boiling water, electrophoresis was performed to separate different proteins using 10% SDS-PAGE gel. After that, proteins were transferred to PVDF membranes. Then the membrane was blocked for 2 h in PBS containing 5% non-fat milk at room temperature. Rabbit Survivin (1: 1200, ab469, Abcam) and GAPDH (1: 1000, ab37168, Abcam) primary antibodies were used to incubate the membranes for 15 h at 4 °C, followed by incubating by anti-goat IgG- HRP (1:1000; ab6721; Abcam) for 2 h at 24 °C. ECL substrate (ab65623, Abcam) was utilized to develop signals. Image J v1.48 software was used to process all signals.
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10

STAT3 and GAPDH Protein Analysis

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RIPA solution (Sangon, Shanghai, China) was mixed with plasma (1 ml RIPA per 0.15 ml plasma) and SCC-17A cells (1 ml RIPA per 105 cells). Denaturing, electrophoresis (10% SDS/PAGE gel), gel transfer (PVDF membranes), blocking (5% non-fat milk) and blotting were performed in routine manner. Primary antibodies included rabbit polyclonal STAT3 (226943, 1:900, Abcam) and GAPDH (ab9485, 1:900, Abcam). Secondary antibody was IgG-HRP secondary antibody (1:800, goat anti rabbit, MBS435036, MyBioSource). ECL (Sigma–Aldrich, U.S.A.) was used in signal development and ImageJ v1.46 software was used for signal process.
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