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15 protocols using lipoxygenase

1

Purification and Characterization of Snake Venom Compounds

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Spectrapar dialysis membrane (2 kDa, 8 kDa and 12 kDa MWCO), CM-Sephadex C25, Sephadex G25, Sephadex G10 and Sephadex G50, Hind III digest of λ-phage DNA were purchased from Sigma Aldrich Co., USA. Agarose, Bovine Serum Albumin (BSA), trifluoro acetic acid (TFA), acetonitrile, dilinoleoyl phosphatidyl choline (DL-PC), lipoxygenase, deoxycholate, NaCl, KCl, MgSO4, D-Glucose, EDTA, Diphenyl amine (DPA) were purchased from E-Merck India. N. naja venom was obtained from Haffkine Institute for Training, Research and Testing, Mumbai, India. The lyophilized powdered venom was dissolved in 0.9% saline (0.1 mg/ml) and preserved at 4°C until use. All other chemicals and reagents used were of analytical grade and organic solvents were distilled prior to use.
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2

Characterization of Organic Compounds

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Acetonitrile, methanol, isopropanol, dimethyl sulfoxide (DMSO), tetrahydrofuran (THF), acetone, absolute ethanol, sodium linoleate, lipoxygenase, butylated hydroxyToluene (BHT) and tris (hydroxymethyl) aminomethane hydrochloride (TRIS) were purchased from Merck (Milan, Italy). Toluene, potassium thiocyanate, copper(II) carbonate hydroxide and thionyl chloride were purchased from Alfa-Aesar. Transcinnamamide and chloral hydrate were purchased from TCI. 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) was purchased from Sigma-Aldrich (Czech Republic). The commercial reagents were used as received, without any further purification. Ultrapure water was obtained with MilliQ Millipore. THF was distilled from sodium/benzophenone. NMR 1 H NMR spectra were recorded on a Bruker Advance III HD 600 spectrometer at room temperature with tetramethylsilane (TMS) as internal standard in DMSO-d6. Chemical shifts, multiplicity and coupling constants were reported.
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3

Comprehensive Analysis of Bioactive Compounds

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Jasmonic acid, yeast extract, ferrozine (3-(2-pyridyl)-5,6-bis-(4-phenyl-sulfonic acid)-1,2,4-triazine), 2,20-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid) (ABTS), α-amylase, pancreatin, pepsin, lipase, α-glucosidase, bile extract, lipoxygenase, linoleic acid, angiotensin converting enzyme, o-phthalaldehyde, p-nitrophenyl acetate, dimethyl sulfoxide, 3,5-dinitrosalicylic acid, p-nitrophenol, protocatechuic acid, syringic acid, vanillic acid, sinapic acid, salicylic acid, caffeic acid, and hydroxybenzoic acid, cyclohexamide, resazurin were purchased from Sigma-Aldrich (Poznan, Poland). The COX Activity Assay kit was purchased from Cayman Chemical company (Ann Arbor, MI, USA). Penicillin and streptomycin were purchased from Life Technologies, Warsaw, Poland. Mueller–Hinton broth, and Mueller–Hinton agar were also obtained (Biomaxima, Lublin, Poland). All other chemicals were of analytical grade.
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4

Macrophage Anti-Inflammatory Assay Protocol

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Carbopol and Glycerine were purchased from Sigma, Germany. Lipoxygenase (1.13.11.12, type I-B, Soybean), linoleic acid, and LPS (lipopolysaccharide from Escherichia coli 0111:B4) were purchased from Sigma (St. Louis, MO, USA). The RAW 264.7 murine macrophage cell line and L929 healthy mouse fibroblast were purchased from ATCC (Gaithersburg, MD, USA) and DMEM was purchased from Gibco (New York, NY, USA). All the other chemicals and solvents were of analytical or HPLC grade.
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5

Enzymatic and Antioxidant Assays of Natural Compounds

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Analytical grade organic solvents (such as ethanol, methanol, etc.) were purchased from Daejung Chemicals & Metals Co., Ltd., Korea. Acetylcholinesterase (AChE) Electric eel (CAS 9000-81-1), acetylthiocholine iodide (ATCI), butyrylcholinesterase (BChE) equine serum lyophilized (CAS 9001-08-5), butyrylcholine iodide (BTCI), dithiobis nitrobenzoic acid (DTNB), galanthamine, 2,2’-azinobis-3-ethylbenzothiazoline-6-sulfonic acid (ABTS), trolox, daidzein, genistein, glycitein, (+)-catechin, rutin, quercetin, gallic acid, soyasaponin I, Folin–Ciocalteau’s reagent, cyanidine 3-o-glucoside chloride, Tris-HCl, lipoxygenase, aspirin, perchloric acid, linoleic acid, casein and 1,1-Diphenyl-2-picrylhydrazyl (DPPH) were obtained from Sigma.
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6

Biochemical Analysis of Natural Compounds

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Bovine serum albumin, trypsin, Tris-HCl, perchloric acid, casein, lipoxygenase, linoleic acid, lutein, rutin, β-carotene, and methanol, were obtained from Sigma Aldrich, St. Louis, MO, USA, through Analytical Instrument Pvt Ltd., Colombo, Sri Lanka. All other chemicals used were of analytical grade.
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7

DPPH Free Radical Scavenging Assay

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1,1-Diphenyl-2-picrylhydrazyl (DPPH), NADH (nicotinamide adenine dinucleotide), lipoxygenase, linoleic acid, xanthine (99%), xanthine oxidase (25 units), BHT (butylated hydroxytoluene), PMS (phenazinemethosulfate), glutathione and ascorbic acid were purchased from Sigma-Aldrich (St. Louis, MO, USA) and silica gel TLC 60 F254 from Merck (Darmstadt, Germany).
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8

Lipoxygenase Inhibitory Assay of Phytochemicals

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The lipoxygenase (LOX) inhibitory effect of n-hexane, chloroform soluble extract, and its isolated compounds was determined by using published methods [25 (link)]. The lipoxygenase inhibitory effect was done by using different concentrations of chloroform fraction and its isolated compound. LOX inhibitory potential was identified by a slight modification of the published procedure spectroscopic procedure established by lipoxygenase (EC.1.13.11.12) Type 1 (soybean) and pure linoleic acid obtained from Sigma. All chemicals and reagents used in this screen test were of analytical grade and obtain from Sigma. In this screening test, 160 ml 0.1 mm (PH = 7), concentration buffer solution, and 10 μL of extract/compound solution were combined, and then the standard solution was combined. The reaction mixture was incubated for 5 min at 258 °C. After incubation 10 ml of linoleic acid was mixed with substrate solution the absorption changes with the development of (9Z,11E)-13S-hydropeoxyoctadeca-9,11-dienoate. After 10 min control and sample (compound/extract) were dissolved in methanol. The positive control used in this assay is baicalein and tenidap sodium. The results were measured and IC50 was calculated with the help of the EZ-fit enzyme kinetic program according to the published method [25 (link)].
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9

Antioxidant and Enzyme Inhibition Assays

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Gallic acid, 2,2-diphenyl-1-picrylhydrazyl (DPPH), methanol (HPLC grade), 6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid (Trolox), sodium acetate solution, potassium chloride solution, α-glucosidase from Saccharomyces cerevisiae (≥10 units/mg protein), lipoxygenase from Glycine max (soybean) type I-B, 50,000 units/mg protein, α-amylase from porcine pancreas (type I-A, 700–1400 units/mg protein), pancreatin lipase (111.5 units/mg protein), linoleic acid (≥99%), p-nitrophenyl-α-d-glucopyranoside (≥97.5%), p-nitrophenyl palmitate (98%), starch solution, Triton X-100, Arabic gum, dinitrosalicylic acid (DNS), orlistat ≥ 98%, quercetin ≥ 95%, and acarbose ≥ 98% were acquired from Sigma Aldrich (Steinheim am Albuch, Germany). All chemicals and reagents utilized in the experiments were of analytical grade.
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10

Anti-inflammatory Activity of Z. leprieurii Oils

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The anti-inflammatory activities of Z. leprieurii essential oils were determined by the method previously described by Nikhila [30 (link)]. In brief, the reaction mixture containing essential oils in various concentrations (100, 75, 50 and 25 µg/mL of methanol) (in triplicate for each concentration), lipoxygenase (Sigma, Darmstadt, Germany) and 35 µL (0.1 mg/mL) of a 0.2 M borate buffer solution (pH = 9.0) was incubated for 15 min at 25 °C. The reaction was then initiated by the addition of 35 µL of a substrate solution (linoleic acid 250 µM), and the absorbance was measured at 234 nm. Quercetin (Sigma, Darmstadt, Germany) was used as a standard inhibitor at the same concentration as the essential oils. The inhibition percentage of lipoxygenase activity was calculated as follows:
where Abs blank is the Absorbance (Abs) of the reaction media without the essential oil, and Absorbance sample is the Abs of the reaction media with the essential oil minus the Abs value of the diluted essential oil (to compensate for absorbance due to the essential oils themselves).
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