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5 protocols using criterion transfer system

1

Western Blot Analysis of Membrane Proteins

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The Bicinchoninic acid protein assay (Thermo Fisher Scientific) was performed to determine protein concentration of cellular lysates. Fifty micrograms of total protein from cellular lysates was prepared in Laemmli sample buffer and then loaded onto 4–20% Tris·HCl polyacrylamide gels. The proteins were resolved on the Criterion electrophoresis system (Bio-Rad) before being electrically transferred to nitrocellulose blotting membranes (Thermo Fisher Scientific) using the Criterion transfer system (Bio-Rad). A solution of 5% nonfat milk in 1× Tris-buffered saline (TBS; Bio-Rad) was used to block the membranes for 1 h at room temperature. The membranes were then washed with 1× TBS and then incubated with primary antibodies (ENaCα [43 (link)], ENaCβ [43 (link)], ENaCγ [44 (link)], NPRC antibody [5 (link)] at a dilution of 1:1000 in 5% BSA 1× TBS (wt/vol) while on a rocker at 4 °C overnight. Membranes were washed with 1× TBS before being incubated for 1 h in secondary antibody solution containing horseradish peroxidase-conjugated goat anti-rabbit secondary antibody at a dilution of 1:3000 prepared in blocking solution. Membranes were washed with 1× TBS, incubated with SuperSignal Dura Chemiluminescent Substrate, and then imaged on a Bio-Rad ChemiDoc MP Imaging System with Image Lab Software Version 6.1.0 Build 7 (Bio-Rad).
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2

Immunoprecipitation and Immunoblotting of TLR Signaling Proteins

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HEK293FT cells transfected as for BRET assay, THP1 cells, or human primary monocyte-derived dendritic cells were lysed as described previously [44 (link)]. Protein concentrations were determined using the Pierce BCA Protein Assay Kit (Thermo Fisher) and equalized between samples. For Venus immunoprecipitation, Venus cross-reacting GFP-Trap beads (Chromotek) were used according to manufacturer’s instructions. Samples and Novex Sharp protein size marker (Thermo Fisher) were separated by SDS-PAGE using the NuPAGE system with 4–12% Bis-Tris gels (Thermo Fisher) and transferred onto nitrocellulose membranes using the Criterion transfer system (Bio-Rad). Membranes were probed with antibodies against TLR1 (Cell Signalling Technology), TLR2 (D7G9Z, Cell Signalling Technology), MyD88 (D80F5, Cell Signalling Technology), TIRAP (EPR3509, Abcam), GFP (cross-reacts with Venus, 13.1/7.1, Roche), or Renilla luciferase (EPR17791, Abcam), followed by secondary probing with HRP-conjugated anti-mouse or anti-rabbit antibodies (GE Healthcare) as previously described [44 (link)]. HRP-conjugated antibodies against β-actin (AC-15, Sigma) and GAPDH (Proteintech) were used to demonstrate even lane loading.
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3

Western Blot Analysis of Protein Expression

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Twenty micrograms of total protein were resolved on 4–20% Tris HCl polyacrylamide gels using a Criterion electrophoresis system (BioRad; Hercules, CA, USA) at 200 V for 50 min at room temperature. The separated proteins were subjected to transfer onto nitrocellulose membranes (Thermo Fisher Scientific) by using a Criterion transfer system (Bio-Rad). The membranes were blocked in 5% nonfat dry milk 1× Tris-buffered saline (TBS) (Bio-Rad) (w/v) for 1 h at room temperature before being incubated in a 1:1000 dilution of primary antibody (anti-HSP70 (ab181606; Abcam, Waltham, MA, USA, annexin A2 (8235; Cell Signaling Tech, Danvers, MA, USA), GAPDH (649203; Biolegend, San Diego, CA, USA), syntenin (ab19903; Abcam) while rocking overnight at 4 °C. Thereafter, the membranes were washed three times with 1× TBS for 5 min intervals and then incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibody at a dilution of 1:3000 prepared in blocking solution while on a rocker for 1 h at room temperature. The membranes were then washed four times with 1× TBS for 4 min intervals, incubated with ECL reagent (BioRad) for 7 min at room temperature, and then developed (Bio-Rad imager).
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4

Western Blot Analysis of EV Proteins

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EVs were lysed in a 1:1 dilution with RIPA buffer (Thermo Fisher Scientific) before determining total protein concentration using a bicinchoninic acid protein assay (Thermo Fisher Scientific). Twenty micrograms of total protein was loaded into 4–20% Tris HCl polyacrylamide gels and resolved using the Criterion electrophoresis system (BioRad, Hercules, CA, USA). The resolved proteins were then transferred onto nitrocellulose membranes (GE Healthcare, Piscataway, NJ, USA) using the Criterion transfer system (BioRad). The membranes were blocked in a mixture of 5% non-fat milk and 1× TBS (TBS; BioRad) at room temperature for an hour on an automated rocker. The nitrocellulose membranes were washed twice with 1× TBS and incubated with primary antibodies (annexin A2 (8235; Cell Signaling), GRP94 (20292; Cell Signaling Technology), and HSP70 (ab228421; Abcam)) overnight on an automated rocker at 4 degrees Celsius. Next, the membranes were washed three times with 1× TBS and incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibody (BioRad) at a 1:3000 dilution prepared in blocking solution for an hour on an automated rocker. The nitrocellulose membranes were washed four times with 1× TBS, incubated with ECL reagent (BioRad) for seven minutes, and developed on an imager (BioRad).
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5

Western Blot Protein Detection Protocol

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Cells were washed once with ice-cold PBS and stored at −80 °C or immediately lysed using lysis buffer (50 mM HEPES pH 7.4, 150 mM NaCl, 1% NP-40, 2x Roche EDTA-free protease inhibitors). Lysates were collected by scraping and were cleared by centrifugation at 16,100 g for 10 minutes at 4 °C. Total protein was quantified using the Bradford method and normalized prior to electrophoresis using hand-cast 7.5% polyacrylamide gels. Proteins were transferred to 0.45 μm nitrocellulose membranes (Bio-Rad) using a Bio-Rad Criterion transfer system. Membranes were blocked for 1 hour at room temperature using blocking buffer (5% BSA, 0.1% sodium azide in TBS-T). Membranes were incubated with primary antibodies diluted in blocking buffer for 1 hour at room temperature or overnight at 4 °C. Membranes were rinsed with TBS-T (3 × 5 minutes at room temperature) and incubated with secondary antibodies diluted in blocking buffer for 1 hour at room temperature. Membranes were rinsed with TBS-T (3 × 5 minutes at room temperature) and were imaged using a Li-Cor Odyssey system.
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