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Horseradish peroxidase labeled secondary antibody

Manufactured by Cell Signaling Technology
Sourced in United States, China

Horseradish peroxidase-labeled secondary antibody is a laboratory reagent used to detect and quantify the presence of a target protein in a sample. It consists of a secondary antibody that binds to the primary antibody, which is specific to the target protein, and is conjugated to the enzyme horseradish peroxidase. This enzyme can catalyze a colorimetric or chemiluminescent reaction, allowing for the visualization and quantification of the target protein.

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44 protocols using horseradish peroxidase labeled secondary antibody

1

Retinal Müller Cell Protein Analysis

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After appropriate treatments, retinal Müller cells or retinal lysates were collected into lysis buffer containing protease and phosphatase inhibitors. Equal amounts of protein from the cell or tissue extracts were separated on the pre-cast tris-glycine gel (Invitrogen, Carlsbad, CA), blotted onto a nitrocellulose membrane. After blocking in TBST (10 mM Tris-HCl buffer, pH 8.0, 150 mM NaCl, 0.1% Tween 20) and 5% (w/v) BSA, the membrane was treated with primary antibodies to insulin receptor, IRTyr1150/1151, IRS-1, IRS-1Ser307, Akt, AktSer473, and cleaved caspase 3 (Cell Signaling, Danvers MA) at a 1:500 dilution followed by incubation with horseradish peroxidase labeled secondary antibodies (1:5000). The antigen-antibody complexes were detected using chemilluminescence reagent kit (Thermo Scientific). Mean densitometry of immunoreactive bands was assessed using a C500 imager (Azure Biosystems), and results were expressed in densitometric units and compared to control groups for each individual experiment. For the phosphorylated antibodies, the ratio of phosphorylated to total protein levels are presented.
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2

Western Blot Analysis of DNA Damage Signaling

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Whole-cell lysates were harvested using radioimmunoprecipitation assay buffer with a protease inhibitor cocktail and the PhosSTOP phosphatase inhibitor (Roche, Basel, Switzerland), and protein concentrations were determined using the BCA assay (Pierce, Dallas, TX, USA). Protein samples were then subjected to 8–12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis separation and blotted onto polyvinylidene fluoride membranes (EMD Millipore, Billerica, MA, USA). The membrane was blocked with 5% dry skim milk and then incubated with the following primary antibodies at 4 °C overnight: anti-Flag (Sigma-Aldrich, St. Louis, MO, USA), His, phospho-ATR (Ser428), phospho-ATM (Ser1981), phospho-Chk1 (Ser345), phospho-Chk2 (Thr68), phospho-BRCA1 (Ser1524), phospho-p53 (Ser15), PARP, cleaved PARP, caspase-3, cleaved caspase-3, caspase-7, cleaved caspase-7, caspase-9, cleaved caspase-9 (Cell Signaling Technology, Danvers, MA, USA). After washing, the blots were incubated with horseradish peroxidase-labeled secondary antibodies (Cell Signaling Technology) and detected by enhanced chemiluminescence (EMD Millipore). GAPDH (Cell Signaling Technology) served as an endogenous loading control. Full gel images for all western blot experiments are provided in Supplementary Fig. 6.
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3

Western Blot Analysis of Protein Expression

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Cells were lysed using radioimmunoprecipitation assay buffer (Thermo Fisher Scientific, Waltham, MA, USA) with a protease inhibitor cocktail (Roche, Basel, Switzerland) for 30 min at 4 °C. Protein concentrations were quantitated using a BCA protein assay kit (Thermo Fisher Scientific). Protein samples were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto nitrocellulose membranes. Protein levels were detected using the primary antibodies: anti-ARID1A (#24,414; Cell Signaling Technology, Danvers, MA, USA), anti-PLAU (#15,800; Cell Signaling Technology), anti-phospho-Akt (#4060; Cell Signaling Technology), anti-Akt (#9272; Cell Signaling Technology), anti-GAPDH (#2118; Cell Signaling Technology), and anti-TM4SF1 (PA5-21119; Thermo Fisher Scientific). Horseradish peroxidase-labeled secondary antibodies (Cell Signaling Technology) were then used. Protein bands were visualized by enhanced chemiluminescence.
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4

Western Blot Analysis of Extracellular Matrix Proteins

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Western blot was performed as described previously [12 (link)]. The primary antibodies (Santa Cruz Biotechnology) were diluted as follows: TGF-β1, 1:200; Smad7, 1:250; collagen I, 1:200; collagen III, 1:200; and β-actin, 1:500. Horseradish peroxidase–labeled secondary antibodies (Cell Signaling Technology) were diluted 1:1000 with 0.2 % TBS-T and 1 % skim milk. The protein bands on the Western blots were visualized using ECL Plus (Amersham, Arlington Heights, IL, USA). The relative band densities were normalized against β-actin.
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5

Protein Expression Analysis Protocol

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Cell lysis followed by protein extraction was performed as described previously (Basu et al., 2014). Lysates were subjected to immunoblotting with antibodies specific for ETS‐1, ETS‐2, MMP‐9, MMP‐13, HIF‐1α, vascular endothelial growth factor (VEGF), lactate dehydrogenase A (LDHA), glyceraldehyde‐3 phosphate dehydrogenase (GAPDH) (Santa Cruz Biotechnology; 1:2000); MMP‐2, protein kinase B (AKT), p‐AKT, proliferating cell nuclear antigen, E‐cadherin, N‐cadherin and vimentine (Cell Signaling, Danvers, MA, USA; 1 : 1000). Bands were visualized by reacting horseradish peroxidase‐labeled secondary antibodies (Cell signaling; 1 : 5000) with the ECL substrate (BioRad) by chemiluminesence.
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6

Extraction and Characterization of Gigantol

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Gigantol was extracted from stems of Dendrobium draconis Rchb.f., as previously described [45 (link)] and dissolved in dimethylsulfoxide (DMSO) at the indicated working concentrations. 3-(4,5-Dimethylthiazol-2-yl) 2,5-diphenyltetrazolium bromide (MTT), Hoechst 33342, propidium iodide (PI), bovine serum albumin (BSA), dimethyl sulfoxide (DMSO), cocktail protease inhibitor, hematoxylin, and eosin were purchased from Sigma chemical, Inc. (Chemical Express, Bangkok, Thailand). RPMI-1640 medium, DMEM, phosphate buffer saline (PBS), glutamine, penicillin, and streptomycin were purchased from Gibco company (Gibthai, Bangkok, Thailand). Primary antibodies against CD133, ALDH1A1, total AKT, phosphorylated AKT (Ser473), total STAT3, phosphorylated STAT3 (Ser727), and GAPDH, horseradish peroxidase labeled secondary antibodies, and RIPA lysis buffer were purchase from Cell Signaling Technology (Theera Trading, Bangkok, Thailand). Pentobarbital sodium injection was purchased from Ceva Sante Animal (VET AGRITECH, Nonthaburi, Thailand). 3,3′-Diaminobenzidine tetrahydrochloride hydrate was purchased from TCI Co., LTD (Chemical Express, Bangkok, Thailand). Primary antibodies of Ki-67 and α-SMA and matched secondary antibodies were purchased from DAKO (Medicare Supply, Bangkok, Thailand).
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7

Protein Quantification and Western Blot Analysis

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Cells were collected and added with RIPA lysate (Solarbio, Beijing, China) and PIC protease inhibitor (Solarbio). Ultrasonic cracking and centrifugal collection of supernatant. The BCA protein detection kit (Thermo Fisher Scientific, Waltham, MA, USA) measured the protein concentration of the sample. The samples were separated by gel electrophoresis with sodium dodecyl sulfate polyacrylamide (SDS-PAGE; Dakewe Biotech, Shenzhen, China), after which the proteins were transferred to polyvinylidene fluoride (PVDF) membranes (Thermo Fisher Scientific). 5% skim milk (BD, Franklin Lakes, NJ, USA) was enclosed for 1 h and the membrane was hybridized with NOX-2 monoclonal antibody (Abcam, Cambridge, UK) or GAPDH monoclonal antibody (Cell Signaling Technology, Beverly, MA, USA). TBST was washed and incubated with horseradish peroxidase labeled secondary antibodies (Cell Signaling Technology). ECL reagent (Solarbio) was used for chemiluminescence. The protein band strength was quantitatively analyzed by Image J software, and the GAPDH protein strength was used as an internal reference for standardized analysis.
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8

Modulation of SPARC and COL3A1 expression

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Cells were transfected with 50 nM negative control RNA mimics (denoted as NC), mimics-miR-29a/b, anti-scramble (control anti-miRNA) and anti-miR-29a/b siRNA duplexes for SPARC and COL3A1 (Gene Pharma) in 24-well plates. Cell samples and nuclear/cytoplasmic extracts were prepared according to the manufacturer’s instructions (Thermo), collected 48 h later, and analyzed using Western blotting. GAPDH (Cell Signaling Technology) was used as a loading control. Protein expression was detected by incubation with either rabbit polyclonal anti-SPARC or anti-COLA1 (Santa Cruz Biotechnology). Immunoreactive bands were detected by ECL (Amersham, USA) using horseradish peroxidase-labeled secondary antibodies (Cell Signaling Technology).
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9

Inhibition of Inflammatory Response in RAW 264.7 Cells

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RAW 264.7 cells were seeded in a 6-well plate, pretreated with 4-hydroxycinnamaldehyde (12.5 µM and 25 µM) and ECC (200 µg/mL) for 2 h, and then treated with LPS at 100 ng/mL. The cells were lysed in RIPA buffer (50 mM Tris-HCl pH 7.4, 150 mM NaCl, 0.25% deoxycholate, 1% NP-40, and 1 mM EDTA), and the protein concentration was determined using BCA reagent (Thermo Fischer Scientific, Rockford, IL, USA) according to the manufacturer’s instructions. Proteins were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride (PVDF) membranes (Merck Millipore, Darmstadt, Germany). After the transfer, the membranes were blocked with 5% nonfat dried milk/TBST (20 mM Tris pH 7.4, 150 mM NaCl, and 0.2% Tween-20) for 1 h and then incubated overnight at 4 °C with a primary antibody from Cell Signaling Technology (Danvers, MA, USA). After washing with TBST, the membranes were probed with horseradish peroxidase-labeled secondary antibodies (Cell Signaling Technology, Danvers, MA, USA). Finally, the proteins were visualized using enhanced chemiluminescence detection reagent (Thermo Fisher Scientific, Pittsburgh, PA, USA). The densities were normalized to the expression of GAPDH or the total amount of each protein.
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10

Investigating Breast Cancer Signaling Pathways

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8Br-cAMP, PD98059 and LY294002 were purchased from Sigma-Aldrich, Inc. (St. Louis, MO). EGF was purchased from Gemini Bioproducts (West Sacramento, CA). ZD1839 (gefitinib) was purchased from AstraZeneca. Anti-BCRP (BXP-21) and anti-EGFR antibodies were obtained from Millipore, Cambridge, MA; anti-p-CREB (Ser-133) and anti-CRTC2 antibodies were purchased from Santa Cruz Bio Technology (Santa Cruz, CA). The anti-p-AKT, p-ERK, and GAPDH antibodies and the horseradish peroxidase labeled secondary antibodies were purchased from Cell Signaling Technology (Danvers, MA). Fumitremorgin C (FTC) was kindly provided by Dr. Susan Bates of the Medicine Branch, National Cancer Institute.
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