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13 protocols using 8 ohdg fitc antibody

1

Assessment of DNA Damage Markers

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DNA damage markers γH2AX and 8-OHdG [36 (link)] were examined. For γH2AX measurement, cells were fixed and mixed with an antibody for γH2AX [36 (link)] (Santa Cruz Biotechnology; Santa Cruz, CA, USA) (4 °C, 1 h) and Alexa Fluor 488 secondary antibody (Cell Signaling Technology, Danvers, MA, USA). Then, cells were mixed with 7AAD (5 μg/mL, 30 min). In terms of 8-OHdG detection, cells were fixed and incubated with an FITC-8-OHdG antibody (Santa Cruz Biotechnology, Santa Cruz, CA, USA) (4 °C, 1 h). Finally, they were analyzed by flow cytometry (FL1/FL3 and FL1 channels for γH2AX/7AAD and 8-OHdG, respectively). The actual settings for the windows are presented in Supplementary Figures S3 and S4.
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2

Quantifying DNA Damage Markers

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Several DNA damage indicators, such as γH2AX and 8-OHdG, were detected. Cells need to process with 75% ethanol fixation before antibody reactions. Except for the extra step for 7AAD (5 μg/mL, 30 min) incubation, γH2AX and 8-OHdG [29 (link)] were detected by specific antibodies such as γH2AX [53 (link),54 (link)] (Santa Cruz Biotechnology; Santa Cruz, CA, USA)/Alexa Fluor 488-secondary antibody (Cell Signaling Technology, Danvers, MA, USA) and FITC-8-OHdG antibody (Santa Cruz Biotechnology), respectively. Finally, these fluorescence intensities were detected by the Accuri C6 flow cytometer.
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3

Quantifying DNA Damage Markers via Flow Cytometry

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Levels of γH2AX and 8-OHdG [42 (link)] are proportional to the fluorescent intensities generated by antibody detection to the 75% ethanol fixed cells. Primary antibodies for γH2AX [42 (link)] (Santa Cruz Biotechnology, Santa Cruz, CA, USA) and FITC-8-OHdG antibody (Santa Cruz Biotechnology, Santa Cruz, CA, USA) were used to incubate with these fixed cells at 4 °C, 1 h. Notably, secondary antibody (Cell Signaling Technology, Danvers, MA, USA) and 7AAD (5 μg/mL, 30 min) were further applied for γH2AX detection. The Guava easyCyte flow cytometer assessed these intensities. Their counts for (+) regions were classified as γH2AX and 8-OHdG (+) cells.
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4

Quantification of DNA Damage Markers

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DNA damage was detected by probing with the markers γH2AX [33 (link)] and 8-OHdG [34 (link)]. Briefly, cells were fixed overnight. After washing with PBS, γH2AX was detected by γH2AX antibody [33 (link)] (Santa Cruz Biotechnology; Santa Cruz, CA, USA) (4 °C, 1 h) and Alexa Fluor®488-labeled secondary antibody (Cell Signaling Technology). Subsequently, 7AAD (5 μg/mL, 30 min) was added. 8-OHdG was detected by 8-OHdG-FITC antibody (Santa Cruz Biotechnology) (4 °C, 1 h). The γH2AX and 8-OHdG intensities were examined by flow cytometry (Accuri C6).
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5

Measuring Oxidative DNA Damage by Flow Cytometry

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Following the cell harvesting and PBS washing, the oxidative DNA damage (8-OHdG) was determined by antibody-associated flow cytometry [35 (link)]. Generally, the fixed cells (Ca9-22 and CAL 27) were mixed with 8-OHdG-FITC antibody (1:10,000 dilution) (Santa Cruz Biotechnology) (4 °C, 1 h) for the flow cytometry and FlowJo analysis. The cells were resuspended in PBS before the flow cytometry.
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6

Oxidative Stress Evaluation via 8-OHdG

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Utilizing flow cytometry, 8-OHdG, an oxidative nucleotide marker, was assessed using an 8-OHdG-FITC antibody (Santa Cruz Biotechnology) at a 100X dilution for 1 h at RT [55 (link)]. Finally, flow cytometry analysis was performed using an Accuri C6 using the FL1 channel.
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7

Quantifying Oxidative DNA Damage with Caspase Inhibitors

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Cells were fixed with 4% paraformaldehyde in PBS for 10 min at room temperature. The cells were incubated for 10 min with PBS containing 0.25% Triton X-100 at room temperature. After cells were washed in PBS three times for 5 min, the cells were incubated in 5% BSA in PBS for 1 h at room temperature. Cells were then incubated with 8-OHdG-FITC antibody at 1:50 dilution (sc-393871, Santa Cruz Biotechnology, Santa Cruz, CA, USA) in 5% BSA in PBS overnight at 4°C before examination using a fluorescence microscope. For caspase blocking, cells were pretreated with caspase-9 inhibitor (BD bioscience 550381, Z-LEHD-FMK, BD Biosciences, San Jose, CA, USA) or caspase-8 inhibitor (BD bioscience 550380, Z-IEDH-FMK) for 2 hours before treatment with SR-T100.
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8

Dual DNA Damage Markers Quantification

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Both γH2AX and 8-hydroxy-2-deoxyguanosine (8-OHdG) were chosen as cellular DNA damage markers. Following fixation, the γH2AX [39 (link)] and 8-OHdG [40 (link)] expressions were detected by antibody-based methods. For γH2AX measurement, Santa Cruz Biotechnology γH2AX antibody (Santa Cruz, CA, USA) (4 °C, 1 h) and Alexa Fluor®488-linked secondary antibody (Cell Signaling Technology) were sequentially applied to fixed cells, and counterstained with 7AAD (5 μg/mL, 30 min). For 8-OHdG measurement, the 8-OHdG-FITC antibody (Santa Cruz Biotechnology) (4 °C, 1 h) was applied. In addition, their intensities were monitored by Accuri C6 flow cytometry.
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9

Detecting DNA Damage: γH2AX and 8-OHdG

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DNA damage was detected with γH2AX [29 (link)] and 8-hydroxy-2-deoxyguanosine (8-OHdG) [9 (link)]. The γH2AX antibody [30 (link)] was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Subsequently, Alexa Fluor®488-secondary antibody (Cell Signaling Technology) and 7AAD were added for double staining. Additionally, 8-OHdG was examined with the 8-OHdG-FITC antibody (Santa Cruz Biotechnology). Finally, the as-prepared cells were subjected to flow cytometry.
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10

Quantifying DNA Damage Markers

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γH2AX [14 (link)] and 8-OHdG [40 (link)] were detected through their targeted antibodies, and their levels were assessed by the flow cytometer as described. The primary antibodies (4 °C, 1 h) of γH2AX and the 8-OHdG-FITC antibody (Santa Cruz Biotechnology; Santa Cruz, CA, USA) were applied to 75% ethanol-fixed cells. 7AAD (5 μg/mL, 30 min) was further added for γH2AX detection.
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