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5 protocols using anti cd107a h4a3

1

NK Cell Immunophenotyping Protocol

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Cells from cultures for 0, 5, 10, and 15 days were labeled using following PE-, FITC-, APC-, or PerCP-conjugated mouse antihuman antibodies in fluorescence activated cell sorter buffer (BD Biosciences, USA) for 30 min at room temperature; the antibodies included anti-CD16 (3G8), anti-NKp30 (P30-15), anti-NKG2D (1D11), anti-DNAM-1 (11A8), and anti-CD107a (H4A3) (Biolegend, USA) as well as CD3-FITC and CD56-PE (BD Biosciences). APC- and FITC-conjugated and purified antimouse IgG1 (Biolegend) were used as isotype controls. Goat antihuman IgG (Thermo Fisher Scientific) and the matched isotype control antibody were used to stain cells and to identify cells binding with Herceptin and IgG. Cells were analyzed using FACS Calibur and FACS CantoII instruments (BD Biosciences, USA) and FlowJo software to determine the percentage of positive cells in CD3CD56+ NK cell populations.
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2

Comprehensive Immunological Antibody Panel

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The following antibodies were used in this study: anti-B7-H3 (FM276, Miltenyi Biotech), anti-GD2 (14.G2a, BD Biosciences), human Ig (polyclonal, Thermo Fisher Scientific), anti-mouse IgG (polyclonal, R&D), anti-CD3 (UCHT1, BioLegend), anti-HisTag (J095G45, BioLegend), anti-CD34 (QBEnd10, R&D), anti-ab-TCR (IP26, BioLegend), anti-CD107a (H4A3, BioLegend), anti-cD25 (BC96, BioLegend), anti-CD69 (FN50, BioLegend), anti-Tim3 (F38-2E2, BioLegend), anti-Lag3 (11C3C65, BioLegend), anti-PD-1 (EH12.1, BD Biosciences), anti-mouse CD45 (30-F11, BioLegend), anti-human CD45 (HI30, BioLegend), Ghost Red 780 (Tonbo Biosciences), Zombie Yellow Viability Dye (BioLegend), propidium iodide (Gibco), Cell Trace Violet (Thermo Fisher Scientific), and Precision Count Beads (BioLegend).
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Comprehensive Immune Cell Profiling

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For surface staining, cells were washed once with FACS buffer (PBS containing 0.1% BSA and 0.02% sodium azide) and cells were incubated for 15 min with the antibody mixture in FACS buffer. Cell surface staining was performed using the following antibodies: anti-CD3 (UCHT1, eBioscience™), anti-CD4 (RPA-T4, BioLegend, San Diego, USA), anti-CD8 (RPA-T8, BioLegend), anti-CD56 (HCD56, BioLegend), anti-HLA-DR (L243, BioLegend), anti-CD107a (H4A3, BioLegend), and anti-CD253/Tumor Necrosis Factor Related Apoptosis Inducing Ligand (TRAIL) (RIK-2, BD). The Fixable Viability Dye (FVD) eFluor™ 780 (eBioscience™) was used to exclude dead cells from the analysis. Cells were washed with FACS buffer and fixated with 4% PFA for up to 2 h. Cells were washed twice with Intracellular Staining Perm Wash Buffer (BioLegend) and incubated for 20 min with anti-GzmB (GB11, BD) and anti-IFNγ (XNG1.2, BD) in Intracellular Staining Perm Wash Buffer. Cells were washed again twice with Intracellular Staining Perm Wash Buffer, collected in FACS staining buffer, and stored at 4°C until acquisition. Samples were acquired with a BD LSR II flow cytometer with a HTS module and data were analyzed using FACSDiva and FlowJo Version 10.8 (both BD Becton Dickinson, Heidelberg, Germany).
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4

Killer Cell Receptor Expression Analysis

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anti-CD56 (B159), anti-CD56 (NCAM-1), anti-CD3 (UCHT1), anti-CD16 (3G8), anti-CD64 (10.1), IgG1 (MOPC21) from Becton Dickinson (BD, CA, USA). Anti-KIR2DL1/DS1 (EB6), anti-KIR2DL2/3/DS2 (GL183) and anti-NKG2A (Z199) from Beckman Coulter (CA, USA). The anti-CD107a (H4A3) from Biolegend (CA, USA). The anti-Lir-1 (HP-F1) from eBioscience (CA, USA). The anti-human IgG4 (HP6025) and Phenylarsine oxide from Sigma Aldrich. The FcγRI (10.1) blocking antibody from R&D Systems (MN, USA). IPH2101 from Innate Pharmaceuticals Inc. (France)/Bristol-Myers Squibb (NY, USA). Rituximab (Rituxan) from Genentech (CA, USA). Human AB serum from Atlanta Biologicals (GA, USA). Human recombinant IFN-γ from Biolegend and human recombinant IL-2 (Proleukin® (Aldesleukin)) from Chiron (CA, USA). Human IvIg (Gammagard) from Baxter International Inc. (IL, USA).
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5

Intracellular Cytokine and NKT Cell Staining

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For intracellular cytokine staining of peptide-specific CD8+ T cells (Fig. 4E), anti-CD29/49d (BD Biosciences) and anti-CD107a (H4A3; BioLegend) were added to the cells 1 h before addition of 300 ng/mL monensin and 500 ng/mL brefeldin-A (both Sigma-Aldrich). After 18 h in culture, live/dead and surface Ab staining was performed before cells were fixed in Cytofix/Cytoperm™ solution (BD Biosciences) for 20 min. Intracellular cytokine staining was then performed using anti-IFN-γ (clone 45.B3; BioLegend) for 30 min at room temperature. Cells were washed 2× in PermWash™ buffer (BD Biosciences) and PBS before analysis. For intranuclear staining of NKT cells with anti-Ki67 (Fig. 1D), following live/dead and surface Ab staining, cells were permeabilized and fixed in FoxP3 Perm/Fix buffer (BioLegend) at room temp for 20 min. Cells were washed and re-suspended in FoxP3 Perm buffer (BioLegend) for anti-Ki67 staining for 30 min at room temperature, then washed 2× in flow buffer before analysis.
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