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7 protocols using flex hrp

1

Immunohistochemical Analysis of MUC2 in Esophageal Tissues

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Tissue sections from the cell block and esophageal TMA were deparaffinized, rehydrated through graded alcohols, and washed with phosphate buffered saline. Antigen retrieval was performed by heating sections in 99°C water bath for 30–40 mins. After endogenous peroxidase activity was quenched and nonspecific binding was blocked, antibody for MUC2 (DAKO, CA) was incubated at room temperature for 30 mins. The secondary antibody (Flex HRP, DAKO, CA) was allowed to incubate for 30 mins. After washing, sections were incubated with Flex DAB Chromogen for 10 mins and counterstained with Flex Hematoxylin for 5 mins. A previously diagnosed BE case served as a positive control. Negative control was performed by replacing antibodies with normal serum.
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2

Immunohistochemical Analysis of SNCG in Endometrial Cancer

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From retrospectively collected FFPE endometrial cancer cohort, tissue specimens of three patients with endometrial cancer were stained for SNCG protein. Tissue specimens were cut into 3 μm thick slices using the Leica RM2255 Microtome. Antigen retrieval was performed at 95°C for a period of 40 minutes in pH 6.1 using DAKO antigen retrieval buffer S1699 (DAKO). Endogenous peroxidase was blocked using H2O2-Block FlexPeroxidase (EnVisionTM, DAKO, Lot: 20011164) for 10 min at room temperature. Incubation with Anti-gamma-Synuclein B-21 rabbit antibody (sc-135676, SCBT, 1:100) at room temperature for 30 minutes was followed by staining with a second Antibody Flex Rabbit Linker (K8019, DAKO, Lot: 20010247). The reaction was visualized using FlexHRP (DAKO, LOT: 20011210) for 20 min and visualized using FlexDAB-Chromogen (DAKO) for 10 min. After washing using water, all slides were counterstained with hematoxylin, dehydrated in ascending alcohol concentrations and covered with TissueTek 4770 Coverslipping Film (Sakura®, Sakura Finetek Europe B.V., Alphen aan den Rijn, The Netherlands) on TissueTek SCA (Sakura).
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3

Immunohistochemistry staining of ovarian cancer samples

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The single chromogenic immunohistochemistry staining was performed on 4 μm formalin-fixed paraffin-embedded (FFPE) sections of ovarian cancer resections using the EnVision-Flex HRP kit on the Dako autostainer Link48. Briefly, slides were heated at 60°C for 1 hour, deparaffinized by immersing the slides in 3 consecutive xylene baths, followed by rehydration by immersing slides in 2 consecutive ethanol decreasing grade baths (100%, 95% and 70%) and in water bath. The antigen retrieval was performed in Citrate buffer (pH6, Dako) for 20 min at RT. Peroxidase blocking was performed for 5 min at RT (Flex Peroxidase Blocking, DAKO), followed by primary Ab incubation (CD8, γH2AX, pSTAT1, total STAT1) for 1 h at RT. After several washes, slides were incubation with the secondary Ab (Flex-HRP, DAKO) for 20 min at RT and Peroxidase were revealed with diaminobenzidine-peroxidase substrate (Flex DAB+Sub chromo, Dako) for 10 min at RT. After several washes, slides were counterstained with Flex-Hematoxylin, dehydrated by immersing slides in successive ethanol baths (70%, 95%, 100%) and xylene baths. The slides were then mounted with Shandon-mount medium and analyzed by microscopic observation and semiquantitative analysis by a qualified pathologist (PGF). All Abs are listed in the Key resource table.
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4

Pancreatic Receptor Immunohistochemistry

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In some PET ex vivo autoradiography experiments, the same sections (n = 10) of the pancreas as used for the autoradiography (n = 24) were stained with GLP1-R antibody (abcam, Cambridge, UK). In some other PET ex vivo autoradiography experiments, two adjacent sections (6 μm) were stained with glucagon (n = 10) and insulin (n = 10) antibodies (abcam, Cambridge, UK). Sections were fixed in pre-cooled (−20 °C) acetone for 10 min. After evaporation of acetone from the tissue sections for 20 min at room temperature, the slides were washed in phosphate buffered saline (PBS) 2 times (5 min each), incubated in 0.3% hydrogen peroxide solution at room temperature for 10 min to block endogenous peroxidase activity, washed in PBS, followed by incubation with the primary GLP-1R (ab39072), insulin (ab63820) or glucagon antibody (ab92517). The slides were washed and incubated in Flex+/HRP (Dako, Glostrup, Denmark) for 15 minutes. After another wash, the slides were developed with DAB+ (Dako, Glostrup, Denmark), counterstained with hematoxylin (Biocare Medical, San Diego, CA, USA), rinsed in water, dehydrated, and finally mounted.
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5

Immunohistochemical Analysis of Cell Proliferation

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Tissues were fixed in formalin and embedded in paraffin, then sections (4 µm) were cut. Following deparaffinization with xylene, the sections were rehydrated with graded ethanol and washed with PBS, then stained with hematoxylin and eosin for histological analysis. The immunohistochemistry staining of sections was performed by using the Dako EnVision FLEX kit (Dako, Glostrup, Denmark) according to the manufacturer’s instructions as previously described [44 (link)]. Briefly, the sections were subjected to antigen retrieval in Target Retrieval Solution (Dako, Glostrup, Denmark). Endogenous peroxidase was blocked with Peroxidase-Blocking Reagent (Dako, Glostrup, Denmark). Then, the sections were incubated with primary antibody at 4 °C overnight and followed by incubation with secondary antibody FLEX/HRP (Dako, Glostrup, Denmark) at room temperatures for 30 min. Staining was developed by diaminobenzidine (DAB) substrate (Dako, Glostrup, Denmark). The stained sections were scanned by Pannoramic MIDI (3D HISTECH, Budapest, Hungary). Primary antibodies used in this study were Ki67 (Abcam, Cat# ab16667), PCNA (CST, Danvers, MA, USA, Cat# 13110), Cyclin D1 (CST, Danvers, MA, USA, Cat# 55506), E-Cadherin (CST, Danvers, MA, USA, Cat# 3195), and N-Cadherin (CST, Danvers, MA, USA, Cat# 13116).
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6

Immunohistochemical Analysis of EMT Markers

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All TMA and conventional sections were deparaffinized at 60 °C for 20 min and rehydrated in graded ethanols. Antigen retrieval was performed by immersing the tissues in citrate buffer (pH = 6.0) for 20 min in a water bath. Endogenous peroxidase and non-specific staining were blocked with 3% H2O2 for 20 min at room temperature. The TMA sections were incubated for 1 hour at room temperature with the following primary antibodies: PRMT1 (ab92299, Abcam, dilution: 1/200), ZEB1 (HPA027524, Sigma Aldrich, dilution: 1/500), RUNX1 (sc-365,644, Santa Cruz, dilution: 1/50), TWIST1 (ABD29 Merck Millipore, dilution: 1/100), E-cadherin (spm471, Santa Cruz, dilution: 1/100), N-cadherin (6D11, DAKO, dilution: 1/100), ß-catenin (ß-catenin-1, Dako, dilution: 1/100). Whole-mount sections were incubated with the PRMT1 (ab92299, Abcam, dilution: 1/200) and ZEB1 (HPA027524, Sigma Aldrich, dilution: 1/500). All slides were then incubated with Envision in FLEX/HRP (K4063, Dako, Denmark) for 30 min. Staining patterns were visualized by exposure to 3,3′-diaminobenzidine (DAB) and counterstained with Mayer’s hematoxylin. Finally, the slides were dehydrated in ethanol, cleared in xylene and mounted for examination. Human kidney tissue was used as a positive control of staining and replacement of the primary antibody with Tris-buffered saline was used as a negative control.
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7

Immunohistochemistry staining of ovarian cancer samples

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The single chromogenic immunohistochemistry staining was performed on 4 μm formalin-fixed paraffin-embedded (FFPE) sections of ovarian cancer resections using the EnVision-Flex HRP kit on the Dako autostainer Link48. Briefly, slides were heated at 60°C for 1 hour, deparaffinized by immersing the slides in 3 consecutive xylene baths, followed by rehydration by immersing slides in 2 consecutive ethanol decreasing grade baths (100%, 95% and 70%) and in water bath. The antigen retrieval was performed in Citrate buffer (pH6, Dako) for 20 min at RT. Peroxidase blocking was performed for 5 min at RT (Flex Peroxidase Blocking, DAKO), followed by primary Ab incubation (CD8, γH2AX, pSTAT1, total STAT1) for 1 h at RT. After several washes, slides were incubation with the secondary Ab (Flex-HRP, DAKO) for 20 min at RT and Peroxidase were revealed with diaminobenzidine-peroxidase substrate (Flex DAB+Sub chromo, Dako) for 10 min at RT. After several washes, slides were counterstained with Flex-Hematoxylin, dehydrated by immersing slides in successive ethanol baths (70%, 95%, 100%) and xylene baths. The slides were then mounted with Shandon-mount medium and analyzed by microscopic observation and semiquantitative analysis by a qualified pathologist (PGF). All Abs are listed in the Key resource table.
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