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Pegfp puro

Manufactured by Addgene

PEGFP-puro is a plasmid that contains the gene encoding green fluorescent protein (GFP) and a puromycin resistance gene. This plasmid can be used for the expression of GFP in cells and for the selection of cells that have successfully integrated the plasmid into their genome.

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3 protocols using pegfp puro

1

CRISPR-Cas9 Knockout and Screening

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Bi-cistronic expression vector pX330 [Addgene no. 42230, (Cong et al, 2013 (link)] containing hCas9 and single-guide RNA (sgRNA) was digested with BbsI, and a pair of annealed oligonucleotides [Supplementary Table S4, (Mali et al, 2013 (link))] for each targeting site was cloned into the guide RNA according to the protocol from Cong et al (Cong et al, 2013 (link)). Designs were chosen to target the gene in one of the first exons and were tested for obvious potential off-targets by bioinformatics analysis (http://www.e-crisp.org).
U251MG cells were transfected with TransIT (Mirus Bio LLC) and pX330-Cas9-sgRNA along with pEGFP-puro [Addgene no. 45561, (Abbate et al, 2001 (link))] (ratio of 10:1) according to the manufacturer's instruction. Cells were selected for 7 days with 1 μg/ml puromycin. Then, cells were seeded as single colonies (10 cells/well) in 96-well plates. After 2–3 weeks, clones were selected based on the TRAIL sensitivity phenotype in the previously described CellTiterGlo assay.
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2

Plasmid Preparation and Cell Viability Assays

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Reagents utilized include: Silicone oil (Fisher S159-500), Borosilicate glass (Harvard Apparatus, type GC150T-10, 30-0062), Petrolatum (Sigma-Aldrich, 16415), Puromycin (BioShop, PUR333.100), Geneticin (Gibco, #11811023). Plasmids used for transfections: px459V2 (Addgene # 62988), pLVX-dTomato-C1 (Takara Bio), pEGFP-puro (Addgene #45561), or pBS/KSTau/LacZ (courtesy of Dr. Friedhelm Bladt, SLRI, Mt. Sinai Hospital, Toronto), modified from TauLacZ LTNL (Dr. Peter Mombaerts, Max Planck Institute, Frankfurt). Plasmids were prepared from bacterial stocks grown overnight using EndoFree Plasmid Maxi Kit (Qiagen, #12362), with plasmid integrity verified using gel electrophoresis and DNA transfection quality independently determined using electroporation and polyethylenimine (Sigma Aldrich, 25 kDa MW, # 408727) mediated transfection of HEK 293T cells (ATCC CRL-3216) according to standard methods together with culture lines and cell media constituents as indicated below. Analyses for beta-galactosidase activity in transfected cells were performed as previously described48 (link). Cell viability was assessed using standard trypan blue exclusion assay (Gibco 15250061)49 (link), DAPI (Sigma D9542), propidium iodide (Sigma P4170)50 (link) or Calcein-AM/ethidium homodimer live/dead assay51 (Molecular Probes L-3224) methods as described previously.
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3

Fluorescent Cell Line Generation

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The 4T1-mScarlet and 67NR-GFP cell lines were generated by transfection using a 1:4 ratio of plasmid DNA:FugeneHD reagent (Promega), according to the manufacturer’s instructions, followed by selection with 500 µg/mL geneticin (Fisher BioReagents) and 3 µg/mL puromycin (MP Biomedicals), respectively. pmScarlet-H-C1 was a gift from Dorus Gadella (Addgene plasmid # 85043). pEGFP-puro was a gift from Michael McVoy (Addgene plasmid # 45561). The MDA-MB-231-mScarlet cell line was generated by electroporation (Lonza) of the pmScarlet-C1 plasmid, according to the manufacturer’s instructions, and selection with 500 µg/ml geneticin. After two weeks of drug selection, cells were sorted (BD FACSAriaIIµ, BD Biosciences), collecting the subpopulations expressing high levels of mScarlet or GFP.
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