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9 protocols using caffeine powder

1

Electrochemical Synthesis of Caffeine Derivatives

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Graphite, potassium permanganate, sulphuric acid (36 M), hydrochloric acid (5%), sodium hydroxide, hydrogen peroxide (30%), hydroxy benzotriazole, dicyclohexyl carbodiimide, nicotinic acid hydrazide, potassium chloride, potassium ferrocyanide, citric acid, sodium citrate, caffeine powder, potassium dihydrogen phosphate, dipotassium hydrogen phosphate were purchased from Sigma Aldrich. All the reactions were carried out under a nitrogen atmosphere with the use of the standard Schlenk technique. All the solvents and reagents were of analytical grade and used without further purification. The O’cean one8 energy drink and imol plus were purchased from a local market and pharmaceuticals, respectively. The stock solutions of caffeine (100 × 10–6 M) were prepared fresh each time of experiments. Aqueous solutions of different pH of buffers were prepared, diluted using millipore water.
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2

GABA-Rich Rice Germ Ferment Extraction

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Rice germ ferment extracts containing 15% GABA (w/w) (RFE-GABA) obtained from Biovan Co. Ltd (Chunchen, Korea) was dissolved in distilled water just before the experiment, while the caffeine powder (Sigma-Aldrich, St. Louis, MO, USA) is prepared in saline. Pentobarbital sodium was obtained from Hanlim Pharm. Co., Ltd. (Seoul, Korea) and diazepam from Samjin Pharm. Co., Ltd. (Seoul, Korea). Maltodextrin (Nutriose) which was used as vehicle of RFE-GABA was purchased from Roquette Freres (Lestrem, France).
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3

Caffeine Dosage and Zebrafish Embryo Exposure

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Fresh solution of caffeine was prepared on the day of the experiment by dissolving caffeine powder (Sigma-Aldrich, St. Louis, MO, USA) in sterile water (vehicle). Two different doses, 100 and 150 mg/L of caffeine, were selected based on our previous study where static treatment with 150 mg/L or less caffeine did not induce lethality in zebrafish embryos exposed from 3 to 72 hpf [31 (link)]. Caffeine exposure to zebrafish embryos was done by immersion method: embryos at the desired stage were placed in a 100 mm × 15 mm Petri dish containing either caffeine solution (treated) or the vehicle (control) and incubated in static condition (no daily solution renewal). For the analysis of ISVs, CVP, and SIVP, the wild type and transgenic embryos Tg(kdrl:EGFP) were treated from 15 until 48 hpf. For the ZFYM and TX assays, wild type zebrafish embryos were exposed to caffeine from 48 until 72 hpf (Supplementary Figure S2).
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4

Cellular Metabolism and Signaling Assay

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IBMX, forskolin, phenylthiourea (PTU), sodium hydroxide (NaOH), DMSO, L-3,4-dihydroxyphenylalanine (L-DOPA), caffeine powder, staurosporine, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), and CellLytic™ lysis buffer were purchased from Sigma (St Louis, MO, USA). Isofraxidin was purchased from ChemFaces Biochemical (Hubei, China).
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5

Evaluating Cellular Metabolic Activity

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MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide), dimethyl sulfoxide, and caffeine powder were purchased from Sigma-Aldrich (St Louis, Missouri). Ethanol absolute (ACS grade) was obtained from Merck (Darmstadt, Germany). Modified Eagle medium (MEM), Nutrient Mixture Ham's F12 medium, fetal bovine serum (FBS), sodium pyruvate, nonessential amino acid, sodium bicarbonate, penicillin, and streptomycin were purchased from Gibco (Gaithersburg, Maryland). Rabbit anti-mouse primary antibodies against mTOR, p-mTOR, p70S6K, p-p70S6K, 4E-BP1, and p-4E-BP1 and goat anti-rabbit secondary antibodies conjugated with horseradish peroxidase (HRP) were purchased from Cell Signaling Technology (Danvers, Massachusetts). Horseradish peroxidase-conjugated horse anti-mouse secondary antibody against b-actin was purchased from Invitrogen (Eugene, Oregon). JC-10 mitochondrial membrane potential assay kit was purchased from Abcam (Cambridge, United Kingdom). Bradford protein assay reagent was purchased from Bio-Rad Laboratories (Hercules, California). Enhanced chemiluminescence (ECL) Western blotting substrate was purchased from Pierce Biotechnology (Rockford, Illinois).
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6

3D-Printed Microneedle Array Fabrication

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Tough 1500 photopolymer resin material was used to 3D-print the MN arrays in this research. This material supports printing resolutions of 50 and 100 microns in the layer thickness [65 (link)]. Moreover, this material is resilient, biocompatible, tough, and durable. In addition, Tough 1500 Resin is certified to be safe for skin contact, which makes it an ideal material for fabricating biomedical devices. The anhydrous ethanol obtained from Fisher Chemical was used to cure the 3D-printed MN array. Dow Sylgard™ 184 Silicone Elastomer, a polydimethylsiloxane (PDMS), was obtained from Ellsworth Adhesives, Germantown, WI, USA. PDMS material was used to develop the female MN array mold. Gantrez™ AN-169, alternating copolymers of methyl vinyl ether (MVE) and maleic anhydride, was sourced from Ashland. Poly (ethylene glycol) with average Mn20,000 and Caffeine powder were obtained from Sigma Aldrich, Burlington, MA, USA. The combination of Gantrez™ and Caffeine powder (X w/v %) was used to fabricate the biodegradable MN array patch. Parafilm M®. (Sigma Aldrich), a flexible thermoplastic sheet with 0.13 mm thickness, was used as a skin simulator (artificial skin) for insertion studies.
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7

Anesthetic Cocktail Formulation

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The following chemicals were used: ketamine hydrochloride (Laboratório Köing, Santana de Parnaíba, SP, Brazil), xylazine hydrochloride (Laboratório Vallée, Montes Claros, MG, Brazil), lidocaine (Laboratório Hipolabor, Sabará, MG, Brazil) and caffeine powder (Sigma), in the form of crystals diluted and 0.9% saline solution.
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8

Synergistic effects of caffeine and TMZ on GBM

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Human GBM cell line U87-MG (American Type Tissue Collection, Manassas, VA, USA) was cultured in minimum essential medium-alpha (MEM-α) supplemented with 10% heat-inactivated foetal bovine serum (FBS), 100 IU/ml penicillin, and 100 μg/ml streptomycin (all from Gibco, Life Technologies, Inc., Carlsbad, CA, USA) in a humidified incubator with 95% air atmosphere and 5% carbon dioxide at 37°C. Caffeine powder was obtained from Sigma, and stock solution was prepared in culture medium at the concentration of 32 mM and kept in 4°C. TMZ was obtained from Schering-Plough (Kenilworth, NJ, USA) and dissolved in dimethyl sulfoxide (DMSO, Sigma-Aldrich, Saint Louis, MO, USA) at the concentration 100 mM, further diluted in culture medium to 10 mM, and stored in -20°C. For treatment, caffeine and TMZ were further diluted in medium to the final concentrations as stated below.
A four-day treatment was divided into two phases: one-day pretreatment and a subsequent three-day treatment of either TMZ alone, caffeine alone, or both (Figure 1). Overall, six arms of cells were set up accordingly. The dosage of caffeine was 1 mM as determined by MTT assay, and the dosage of TMZ we opted was its IC50 value defined in U87-MG cells in our previous work [2 (link)].
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9

Preparation of Coffee Extract Solutions

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For the preparation of the stock solution of the regular and decaffeinated coffee extracts the lyophilized powder was resuspended in sterile Milli-Q water at a final concentration ranging from 100 and 350 mg/ml for all the antimicrobial activity assays. For the caffeine stock a solution was prepared dissolving 150 mg of caffeine powder (Sigma-Aldrich, St. Louis, MO) in 1 ml sterile Milli-Q water at 80°C.
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