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7 protocols using hexokinase

1

Creatine Kinase Assay for Satellite Cell Differentiation

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Satellite cell differentiation was determined by measuring creatine kinase activity using a modified method of Yun et al. [69 (link)]. All plates were removed from -70°C and thawed at room temperature for 15 min, and 500 μl of creatine kinase buffer [20 mM glucose (Thermo Fisher Scientific), 20 mM phosphocreatine (Calbiochem, San Diego, CA, USA), 10 mM mg acetate (Thermo Fisher Scientific), 10 mM adenosine monophosphate (Sigma-Aldrich), 1 mM adenosine diphosphate (Sigma-Aldrich), 1 Unit(U)/ml glucose-6-phosphate dehydrogenase (Worthington Biochemical, Lakewood, NJ, USA), 0.5 U/mL hexokinase (Worthington Biochemical), 0.4 mM thio-nicotinamide adenine dinucleotide (Oriental Yeast Co., Tokyo, Japan), 1 mg/mL BSA, to 0.1 M glycylglycine, pH 7.5] was added to each well including the standard curve wells containing creatine phosphokinase with concentrations from 0 to 140 milliunits/well (mU/well, Sigma-Aldrich). The optical density of each well was measured at a wavelength of 405 nm using a BioTek ELx800 (BioTek, Winooski, VT, USA) plate reader. The differentiation assay was repeated in two independent cultures with 5 wells per treatment group per cell line.
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2

Mitochondrial Respiration and Membrane Potential

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Respiration and ΔΨ were determined using an Oxygraph‐2k high resolution respirometer (Oroboros Instruments, Innsbruck, Austria) fitted with a potential‐sensitive TPP+ electrode. Mitochondria (0.1 mg/mL) were fueled by combined substrates consisting of 5 mmol/L succinate + 5 mmol/L glutamate + 1 mmol/L malate and incubated at 37°C in 2 mL of ionic respiratory buffer (105 mmol/L KCl, 10 mmol/L NaCl, 5 mmol/L Na2HPO4, 2 mmol/L MgCl2, 10 mmol/L HEPES pH 7.2, 1 mmol/L EGTA, 0.2% defatted BSA) with 5 U/mL hexokinase (Worthington Biochemical), and 5 mmol/L 2‐deoxyglucose. ADP was added sequentially to achieve the desired final concentrations with plateaus in respiration and potential achieved after each addition. A TPP+ standard curve was performed in each run by adding tetraphenylphosphonium chloride at concentrations of 0.5, 1.0, 1.5, and 2.0 μmol/L, prior to the addition of mitochondria to the chamber.
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3

Glucose-6-Phosphate Dehydrogenase Activity Assay

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G6P was purchased from USB Corporation, unless otherwise specified. The F420 cofactor with a tail length of 6-9 γ-glutamate residues was prepared as previously described [8 (link)]. Activated carbon, ATP disodium salt (98%), sodium citrate, magnesium chloride and Tris buffer were purchased from Fisher Scientific. D2O, deuterium chloride, D-Glucose and D-Glucose-1-d1 (98 atom % D) were purchased from Sigma Aldrich. Hexokinase was purchased from Worthington Biochemical Corporation. The glucose-6-phosphate assay kit was purchased from ScienCell Research Laboratories.
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4

Actin Purification and Labeling Protocol

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Rabbit muscle actin was purified from acetone powder (Pel-Freeze Biologicals) as described previously [28 (link)]. Pyrene-labelled rabbit muscle actin was prepared as described previously [29 (link)]. ADP-G-actin was prepared using hexokinase (Worthington Biochemical)-conjugated Sepharose beads as described [23 (link)]. UNC-60A was expressed in Escherichia coli and purified as described [30 (link)]. Etheno-ATP was purchased from Invitrogen. DyLight 680-labeled actin was prepared as described for preparation of DyLight 549-labeled actin [31 (link)] using DyLight 680 NHS ester (Thermo Fisher Scientific).
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5

Simultaneous Respiration and Membrane Potential Measurement

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Respiration and ΔΨ were simultaneously determined using an Oxygraph-2k high resolution respirometer (Oroboros Instruments, Innsbruck, Austria) fitted with a potential sensitive tetraphenylphosphonium (TPP+) electrode. Mitochondria (0.05 mg/ml) were incubated at 37°C in 2 ml of ionic respiratory buffer (105 mM KCl, 10 mM NaCl, 5 mM Na2HPO4, 2 mM MgCl2, 10 mM HEPES pH 7.2, 1 mM EGTA, 0.2% defatted BSA) with 5 U/ml hexokinase (Worthington Biochemical), and 5 mM 2-deoxyglucose. ADP was added sequentially to achieve the desired final concentrations with plateaus in respiration and potential achieved after each addition. A TPP+ standard curve was performed in each run by adding tetraphenylphosphonium chloride at concentrations of 0.25, 0.5, 0.75, and 1 μM prior to the addition of mitochondria to the chamber.
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6

Creatine Kinase Assay for Differentiation

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Differentiation was assayed by measuring creatine kinase levels using a modified method of Yun et al. (1997). One plate was collected every 24 h, the medium removed and wells rinsed with PBS, air dried for 15 min, and stored at −70°C until analysis. In brief, plates were thawed for 10–15 min and 500 μL of creatine kinase buffer (20 mmol/L glucose (Thermo Fisher Scientific), 10 mmol/L Mg acetate (Thermo Fisher Scientific), 1.0 mmol/L adenosine diphosphate (Sigma‐Aldrich), 10 mmol/L adenosine monophosphate (Sigma‐Aldrich), 20 mmol/L phosphocreatine (Calbiochem, San Diego, CA), 0.5 U/mL hexokinase (Worthington Biochemical, Lakewood, NJ), 1 U/mL of glucose‐6‐phosphate dehydrogenase (Worthington Biochemical), 0.4 mmol/L thio‐nicotinamide adenine dinucleotide (Oriental Yeast Co., Tokyo, Japan) and 1 mg/mL BSA, Sigma‐Aldrich) was added to each well including the standard curve wells containing creatine phosophokinase at concentrations between 0 and 40 mU/well. The optical density of each well at 405 nm was measured using a BioTek ELx800 (BioTek, Winooski, VT) plate reader. The differentiation assay was plated in two separate experiments with five replicate wells per experiment.
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7

Purification of Rabbit Muscle Actin and Actin-Binding Proteins

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Rabbit muscle actin was purified from acetone powder (Pel-Freeze Biologicals) as described previously (Pardee and Spudich 1982 (link)). ADP-G-actin was prepared using hexokinase (Worthington Biochemical)-conjugated Sepharose beads as described previously (Makkonen et al. 2013 (link)). UNC-60A was expressed in Escherichia coli and purified as described previously (Ono and Benian 1998 (link)). DyLight 680-labeled actin was prepared as described for preparation of DyLight 549-labeled actin (Liu et al. 2010 (link)) using DyLight 680 NHS ester (Thermo Fisher Scientific). Histidine-tagged maltose-binding protein (MBP) was expressed from pDEST-HisMBP, which was developed by the group of David Waugh (National Cancer Institute, Frederick, MD) and obtained through Addgene, and purified as described (Nallamsetty and Waugh 2007 (link)).
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