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Casein blocking buffer

Manufactured by Thermo Fisher Scientific
Sourced in Germany, United States

Casein blocking buffer is a laboratory reagent used to reduce non-specific binding in immunoassays and other protein-based analysis techniques. It contains casein proteins that can effectively block non-specific binding sites on surfaces or antibodies, improving the specificity and sensitivity of the assay.

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12 protocols using casein blocking buffer

1

Immunohistochemical Analyses of Dubia Roach Hemocyanin

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For the immunohistochemical analyses, the material was fixed in 4% formaldehyde. Samples were dehydrated in series of ethanol and HistoChoice® Clearing Agent (Sigma-Aldrich) and embedded in paraplast. The paraplast blocks were cut into 5-μm-thick sections. Slide-mounted sections were deparaffinized (dewaxed) in HistoChoice® Clearing Agent (Sigma-Aldrich), rehydrated gradually through a series of ethanol dilutions and rinsed in water. Blocking of non-specific binding sites was performed with casein blocking buffer (Thermo Fisher) overnight at 4 °C prior to the incubation with anti-HC1 and HC2 antibodies (the antibodies were raised against the hemocyanin subunits of the Dubia roach, Blabtica dubia; a generous gift from Prof. T. Burmester, Hamburg University, Germany) diluted 1:500. In parallel performed control experiments, the primary antibody was omitted. After overnight incubation at 4 °C in a humidified chamber, sections were washed with PBS with 0.1% Triton X-100 and 0.05% Tween 20 and incubated with Alexa Fluor 488 or Cy3 goat anti-rabbit secondary antibodies (Life Technologies) for 4 h at room temperature. After rinsing with PBS, the sections were mounted in ProLong Gold antifade reagents with DAPI (Invitrogen) and analyzed in the DMR Leica epifluorescence microscope equipped with appropriate filters. Each staining experiment was performed in triplicate.
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2

SOSIP.v8.3 Binding Assay

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Half-well 96-well plates were coated overnight at RT with Galanthus nivalis lectin (Vector laboratories) at 20 µg/mL in 0.1 M NaHCO3 pH 8.6. The next day plates were washed and Casein blocking buffer (ThermoScientific) was added. After 30 min a 2 µg/mL concentration of untagged 16055 SOSIP.v8.3 in Casein was added for 2 h at RT. Plates were then washed and a 1:100 dilution of rabbit sera in TBS/2% skimmed milk/20% sheep serum was added for 30 min. Next, mAbs were added for 1.5 h at RT at a final concentration that gave 80% of maximal binding signal as determined by an ELISA in the absence of serum (D11A.F9: 0.1 µg/mL; D11A.F2: 0.1 µg/mL; RM19R: 2 µg/mL, in TBS/2% skimmed milk/20% sheep serum). Plates were then washed three times and a 1:3000 dilution of HRP-labeled donkey anti-human IgG (Jackson Immunoresearch) in Casein was added for 1 h at RT. Washing and colorimetric detection then proceeded as explained for Serum antibody ELISA above. Residual binding was determined as described previously27 (link).
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3

Quantitative ELISA for mAb-CD81 Interactions

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Purified Strep-II-tagged sE2 monomer (1.0 µg ml−1 in TBS) was coated for 2 h at room temperature on 96-well Strep-TactinXT coated microplates (IBA LifeSciences). Plates were washed with TBS twice before incubating with serially diluted mAbs and CD81-LEL-hFc (R and D systems) in casein blocking buffer (Thermo Fisher Scientific) for 90 min. After three washes with TBS, a 1 : 3000 dilution of HRP-labelled goat anti-human IgG (Jackson Immunoresearch) in casein blocking buffer was added for 45 min. After washing the plates five times with TBS +0.05 % Tween-20, plates were developed by adding develop solution [1 % 3,3′,5,5′-tetraethylbenzidine (Sigma-Aldrich), 0.01 % H2O2, 100 mM sodium acetate, 100 mM citric acid] and the reaction was stopped after 3 min by adding 0.8 M H2SO4. Absorbance was measured at 450 nm and data was visualized and analysed on GraphPad Prism.
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4

Quantifying Integrin Conformations

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Alexa Fluor 488-conjugated β2 integrin conformation-specific antibody mAb24 to human β2-I-like-domain, which reports the headpiece opening,21 (link) PE-conjugated anti-CD18 mAb (IB4), and PE-conjugated anti-CXCR2 mAb (5E8) were purchased from Biolegends, San Diego, CA, USA. The KIM127 mAb to human β2-IEGFdomain, which reports the ectodomain extension,22 (link) was purified at the Lymphocyte Culture Center at the University of Virginia from hybridoma supernatant (American Type Culture Collection). KIM127 was directly labeled by DyLight 550 using DyLight antibody labeling kits from Thermo Fisher Scientific, Waltham, MA, USA. Monoclonal anti-actin (Millipore Sigma, St Louis, MO, USA, 1:5000), monoclonal anti-talin-1 (8d4, Millipore Sigma, St Louis, MO, USA, 1:1000) were used for immunoblotting. Recombinant human P-selectin-Fc, ICAM-1-Fc, and IL-8 were purchased from R&D Systems, Minneapolis, MN, USA. Casein blocking buffer was purchased from Thermo Fisher Scientific, Waltham, MA, USA. CellMask DeepRed and CellTracker Orange CMRA were purchased from Thermo Fisher Scientific, Waltham, MA, USA. RPMI 1640, with or without phenol red, and PBS without Ca2+ and Mg2+ were purchased from Thermo Fisher Gibco. HSA was purchased from Gemini Bio Products, West Sacramento, CA, USA.
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5

Protein Expression Analysis in Fibroblast and Osteoblast

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Protein was extracted from fibroblast and osteoblast cell lines with RIPA buffer (Thermo Scientific, Waltham, MA) or used directly from Clontech human protein library (Clontech Laboratories, Mountain View, CA). Lysates (30ug) were electrophoresed on a 4-10% SDS-polyacrylamide gel and transferred to a polyvinylidene fluoride (PVDF) membrane. Using gentle agitation, the membrane was blocked overnight at 4ºC with casein blocking buffer (Thermo Scientific, Waltham, MA) and 10% horse serum. Anti-SMS (1:1000) (Novus Biologicals, Littleton, CO), anti-β-tubulin (1:1000, AbCam, Cambridge, UK), and anti-GAPDH (1:1000, GeneTex, Irvine, CA) were used as primary antibodies. Horseradish peroxidase-conjugated secondary antibodies (1:10000, Bio-rad Laboratories, Hurcules, CA) were used to detect the primary antibodies. The antibody-enzyme complexes were detected by chemiluminescence using Amersham ECL western blotting detection reagent (GE Life Sciences, Pittsburgh, PA) or WesternSure Premium Chemiluminescent Substrate (LI-COR, Lincoln, NE) according to the manufacturer’s specifications. β-tubulin or GAPDH was detected as a loading control.
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6

Immunohistochemical Analysis of Vestigial Protein

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For the immunohistochemical analyses the material was fixed in 4% formaldehyde. Samples were dehydrated in series of ethanol and HistoChoice® Clearing Agent (Sigma-Aldrich) and embedded in paraplast. The blocks were cut into 1 to 5-μm-thick sections. Slide-mounted sections were dewaxed in HistoChoice® Clearing Agent (Sigma-Aldrich), rehydrated gradually through a series of ethanol dilutions and rinsed in water (for further details see10 (link)). Blocking of non-specific binding sites was performed with casein blocking buffer (Thermo Fisher) overnight at 4 °C prior to the incubation with the rabbit anti-Vestigial antibody diluted 1:500. In parallel performed control experiments, the primary antibody was omitted. After overnight incubation at 4 °C in humid chamber, Cy3 goat anti-rabbit secondary antibodies (Life Technologies) were used. Incubation with secondary antibodies was carried out for 4 h at room temperature. After rinsing with PBS, the sections were mounted in ProLong Gold antifade reagents with DAPI (Invitrogen) and analyzed in the DMR Leica epifluorescence microscope (FM) equipped with appropriate filters.
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7

D7324-Tagged BG505 SOSIP.664 ELISA Protocol

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The method to perform sandwich ELISAs using D7324-tagged BG505 SOSIP.664 trimers has been described in detail elsewhere (42 (link), 82 (link)). In summary, trimers were immobilized at 1.0 μg/ml via their D7324 tags for 2 h at room temperature on half-well 96-well plates (Greiner) precoated with Ab D7324 (Aalto Bioreagents) at 10 μg/ml in 0.1 m NaHCO3 (pH 8.6) overnight. Serially diluted Abs were added for 2 h, washed, and then detected using horseradish peroxidase–labeled goat anti-human immunoglobulin (Jackson Immunoresearch). We also used a modified D7324-capture ELISA protocol that was optimized for detecting gl-bNAb binding (66 (link)). The modifications compared with the regular protocol are as follows. Purified BG505 SOSIP.664-D7324 trimers were added at 5 μg/ml instead of 2 μg/ml, and casein-blocking buffer (Thermo Scientific) was used as blocking agent instead of 2% milk in TBS.
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8

ELISA for mAb Binding Characterization

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A 2 μg/mL concentration of GPC-I53-dn5B diluted in Casein blocking buffer (Thermo Scientific) was added for 2 h on high-binding 96-well plates (Greiner). Four-fold serial dilutions of mAbs diluted to 2.5 μg/mL in Casein were then added for 2 h. A 1:3000 dilution of HRP-labeled goat anti-rabbit IgG (Jackson Immunoresearch) in Casein was added for 1 h. Up to now, between each step, plates were washed three times with TBS. Next, plates were washed five times with TBS, 0.05% Tween-20. Colorimetric detection was performed as described above in Serum antibody ELISA. All procedures were performed at RT. The midpoint binding concentration (IC50) was determined by calculating the concentration of mAb that gave 50% of the maximal response from the sigmoidal binding curve.
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9

Western Blot Quantification Protocol

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Cells were lysed in Laemmli sample buffer (62.5 mM Tris-HCl, 2 % sodium dodecyl sulfate (SDS), 10 % glycerol, 0.05 % bromphenol blue, and 100 mM 2-mercaptoethanol). Whole cell/tissue lysates were separated on 4–15 % gradient SDS-polyacrylamide gels (Bio-Rad Laboratories Inc., Hercules, CA, USA) and transferred onto polyvinylidene fluoride membrane (Thermo Fisher Scientific Inc., Waltham, MA, USA). Membranes were blocked for 1 hour in 1 % (w/v) casein in 25 mM Tris pH 7.4, 150 mM NaCl, 0.1 % Tween 20 (TBS-T) (casein blocking buffer, Thermo Fisher Scientific Inc.). After blocking, the membranes were probed with rabbit antibodies to CTHRC1 (Vli-55, www.mmcri.org/antibody, Scarborough, ME, USA), rabbit antibodies to CDH11 (Invitrogen Life Technologies, Grand Island, NY, USA), rabbit antibodies to α-SMA (Abcam, Cambridge, MA, USA), mouse antibodies to α-tubulin (Sigma-Aldrich, St. Louis, MO, USA) as protein load control. As secondary antibodies, HRP-conjugated donkey anti-rabbit, anti-mouse or anti-sheep antibodies (Abcam) were used. Enhanced chemiluminescent substrate (Thermo Fisher Scientific Inc.) and HyBlot-CL film (Denville Scientific Inc., Holliston, MA, USA) were used to detect a signal. Optical density was quantified by ImageJ analysis software [19 (link)].
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10

ELISA for Antibody Characterization

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Purified Strep-II-tagged sE2 monomers (1.0 µg/mL diluted in TRIS buffered saline, TBS) were added to 96-well Strep-TactinXT-coated plates (IBA Lifesciences, Göttingen, Germany) for 2 hours at room temperature. Plates were washed with TBS twice before incubating with serially diluted mAbs in casein blocking buffer (Thermo Fisher Scientific) for 90 min. After three washes with TBS, wells were incubated with a 1:3,000 dilution of HRP-labelled goat anti-human/mouse IgG in casein blocking buffer for 45 min. After washing the plates five times with TBS +0.05% Tween-20, plates were developed by adding develop solution (1% 3,3’,5,5’-tetraethylbenzidine, 0.01% H2O2, 100 mM sodium acetate, 100 mM citric acid). The reaction was stopped after 3 min by adding 0.8 M H2SO4. Absorbance was measured at 450 nm.
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