The largest database of trusted experimental protocols

Sc 377092

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Sc-377092 is a laboratory product offered by Santa Cruz Biotechnology. It is a piece of equipment designed for use in scientific research and testing within controlled laboratory settings. The core function of Sc-377092 is to facilitate specific laboratory tasks, but a detailed description cannot be provided while maintaining an unbiased and factual approach.

Automatically generated - may contain errors

6 protocols using sc 377092

1

Mitochondrial Protein Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
All the chemicals were obtained from Sigma-Aldrich unless otherwise specified. Following antibodies were used in this study: UCP1 antibody (ab-10983, Abcam), BCAT1 antibody (TA504360, OriGene), BCAT2 antibody (9432, Cell Signaling Tech), BCKDHA antibody (sc-271538, Santa Cruz), TOM20 antibody (11802–1-AP, Proteintech), COX-IV antibody (4850, Cell Signaling), OXPHOS cocktail (Abcam, ab110413), PDH-E1α antibody (sc-377092, Santa Cruz), PDH-E1α (pSer232) antibody (AP1063, Millipore), PDH-E1α (pSer293) antibody (ab177461, Abcam), PDH-E1α (pSer300) antibody (AP1064, Millipore), GAPDH antibody (sc-32233, Santa Cruz), and β-actin antibody (A3854, Sigma-Aldrich). Polyclonal antibody for SLC25A44 was generated by using amino acids (MEDKRNIQIIEWEHLDKKKC, MMQRKGEKMGRFQVC, and CKKLSLRPELVDSRH) as epitopes for immunization in rabbit (GeneScript).
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Tumor Metabolism Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin-embedded sections from primary tumor of 102 patients with lymph node metastasis were deparaffinized in xylene and hydrated in decreasing concentrations of ethyl alcohol. The sections were incubated with 3% hydrogen peroxide to block endogenous peroxidase activity, and heated for 10 min at 105 °C by autoclave in Target Retrieval Solution (DAKO, Carpinteria, CA, USA). Nonspecific binding was blocked by incubating with 10% normal rabbit serum for 10 min. The specimens were incubated with anti-GLUT1 antibodies (sc-377228; 1:150; Santa Cruz, Dallas, TX, USA; RRID: AB_2716767) for 30 min at room temperature, anti-PKM2 antibodies (sc-365684; 1:200; Santa Cruz; RRID: AB_10844484) at 4 °C overnight, anti-PDH-E1α antibodies (sc-377092; 1:100; Santa Cruz; RRID: AB_2716767)35 (link) at 4 °C overnight, and with CA9 antibodies (NB100–417; 1:1000; Novus Biologicals, Centennial, CO, USA; RRID: AB_10003398) for 30 min at room temperature. These sections were incubated with a mouse linker for 10 min and peroxidase-labeled polymer (Histofine SAB-PO(M) kit, Nichirei Biosciences Inc., Tokyo, Japan) for 5 min, followed by counterstaining with Mayer’s hematoxylin.
+ Open protocol
+ Expand
3

PDP1-His Pulldown and Immunoprecipitation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Purified PDP1-His6 was immobilized on HisPur resin columns (Pierce Pull-down polyHis protein: protein interaction Kit, Thermo Scientific). WT and TAZ-KO myoblasts (2 × 106) were lysed in a buffer containing 25 mM Tris, 75 mM NaCl, and 0.1% Tween 20 (pH 7.4) and washed once with PBS. After lysing on ice for ∼30 min, the cells were briefly sonicated and centrifuged to obtain a clarified supernatant that was then incubated overnight at 4 °C in a column with immobilized PDP1-His. The next day, the column was washed 5 times before elution. The lysates were then used for immunoprecipitation by using specific antibodies. PDH-E1, 1:500 (sc-377092, SantaCruz), PDH-E2, 1:2000 (13426-1-AP, Proteintech), ACTIN, 1:1000 (sc47778, Santa Cruz); PDP1, 1:1000 (65,575, Cell Signaling).
+ Open protocol
+ Expand
4

Mitochondrial Protein Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
All the chemicals were obtained from Sigma-Aldrich unless otherwise specified. Following antibodies were used in this study: UCP1 antibody (ab-10983, Abcam), BCAT1 antibody (TA504360, OriGene), BCAT2 antibody (9432, Cell Signaling Tech), BCKDHA antibody (sc-271538, Santa Cruz), TOM20 antibody (11802–1-AP, Proteintech), COX-IV antibody (4850, Cell Signaling), OXPHOS cocktail (Abcam, ab110413), PDH-E1α antibody (sc-377092, Santa Cruz), PDH-E1α (pSer232) antibody (AP1063, Millipore), PDH-E1α (pSer293) antibody (ab177461, Abcam), PDH-E1α (pSer300) antibody (AP1064, Millipore), GAPDH antibody (sc-32233, Santa Cruz), and β-actin antibody (A3854, Sigma-Aldrich). Polyclonal antibody for SLC25A44 was generated by using amino acids (MEDKRNIQIIEWEHLDKKKC, MMQRKGEKMGRFQVC, and CKKLSLRPELVDSRH) as epitopes for immunization in rabbit (GeneScript).
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of PDH-E1α in Tissue Sections

Check if the same lab product or an alternative is used in the 5 most similar protocols
In brief, paraffin-embedded sections from 445 patients were deparaffinized in xylene and hydrated in decreasing concentrations of ethyl alcohol. The sections were incubated with 3% hydrogen peroxide to block endogenous peroxidase activity. The sections were then heated for 10 min at 105 °C by autoclave in Target Retrieval Solution (DAKO, Carpinteria, CA, USA). Nonspecific binding was blocked via incubation with 10% normal rabbit serum for 10 min. The specimens were incubated with anti PDH-E1α antibody (sc-377092; 1:100; Santa Cruz Biotechnology, Dallas, TX, USA; RRID:AB_2716767) (14 (link)) at 4 °C overnight. These sections were incubated with a mouse linker for 10 min, and peroxidase-labeled polymer (Histofine SAB-PO(M) kit, Nichirei Biosciences Inc, Tokyo, Japan) for 5 min, followed by counterstaining with Mayer’s hematoxylin.
+ Open protocol
+ Expand
6

Western Blot Analysis of Metabolic Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was extracted in RIPA buffer with proteinase and phosphatase inhibitor cocktail (ChemCruz). 20 μg of denatured total protein for each sample was loaded into an 8–12% SDS-PAGE gel and separated by electrophoresis. The gel was transferred onto polyvinylidene fluoride (PVDF) membranes using a wet transfer method. After transfer, the membranes were probed with the following primary antibodies against PDK4, 1:1000 (ab214938; Abcam); NDUFB6, 1:10,000 (ab110244; Abcam); FOXO1, 1:1000 (14,952; Cell Signaling); FOXO1, 1:1000 (2880; Cell Signaling); ACTIN, 1:1000 (sc47778; Santa Cruz); p-AMPK (Thr172), 1:2000 (2535S; Cell Signaling); AMPKα 1:1000 (2793S; Cell Signaling); TUBULIN, 1:10,000 (ab184970; Abcam); H4, 1:1000 (ab16483; Abcam); H3, 1:500 (sc517576; Santa Cruz) GLUT4, 1:2000 (66,846; Proteintech); PDH-E1, 1:1000 (sc377092; Santa Cruz); and p-PDH (Ser293), 1:1000 (AP1062; Millipore). Anti-mouse or anti-rabbit secondary antibodies (1:10,000) were incubated for 1 h at room temperature, and membranes were developed using SuperSignal™ West Pico PLUS or West Atto ECL (Thermo Scientific).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!