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5 protocols using mir 431 5p mimic

1

Regulation of Lung Cancer Cell Lines by FBXL19-AS1 and RAF1

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Lung cancer cell lines (A549, H1975, SPC-A-1, H125, and H1299) and normal human lung cells (MRC-5) were provided by the American Type Culture Collection (ATCC; Manassas, VA, U.S.A.). All cells were cultured in Roswell Park Memorial Institute (RPMI) 1640 medium supplemented with 10% fetal bovine serum (FBS; Gibco/Invitrogen Inc., Carlsbad, CA, U.S.A.), streptomycin (100 mg/ml), and penicillin (100 U/ml), and then they were maintained at 37°C in humidified atmosphere with 5% CO2.
For down-regulation of FBXL19-AS1 in cells, short hairpin RNA (shRNA) specifically targeting FBXL19-AS1 were designed and synthesized by GenePharma (Shanghai, China). The full-length sequences of FBXL19-AS1 and RAF1 were respectively synthesized and subcloned into pcDNA3.1 (Invitrogen, Carlsbad, U.S.A.) plasmid to produce pcDNA3.1/FBXL19-AS1 and pcDNA3.1/RAF1. MiR-431-5p mimic, miR-431-5p inhibitor, and the corresponding negative controls (miR-NC) were purchased from GenePharma. All plasmids were transfected into A549 and H1299 cells by using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, U.S.A.) in reference of manufacturer’s recommendations. The sequences of shRNA were:
sh-FBXL19-AS1-1: 5′-CCG GCC TCC CTA AGT GTT GGG ATT ACT CGA GTA ATC CCA ACA CTT AGG GAG GTT TTT TG-3′;
sh-FBXL19-AS1-2: 5′-CCG GGC ATT TAA TTT GGC ATA GCA ACT CGA GTT GCT ATG CCA AAT TAA ATG CTT TTT TG-3′.
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2

Modulating Melanoma Cell Behavior

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For cell treatment, A875 and SK-MEL-1 cells were exposed to ISI (I3766, Sigma, St. Louis, MO, USA) with increasing concentrations (10-80 μg/mL) for 24 h. For cell transfection, 1 × 104 cells were planted into the 96-well plates and added with vectors or oligonucleotides via Lipofectamine™ 3000 kit (L3000001, Invitrogen, Carlsbad, CA, USA). The pcD5-ciR vector (GENESEED, Guangzhou, China) was cloned with circ_0002860 sequence for overexpression of circ_0002860 (oe-circ_0002860). The miR-431-5p mimic, miR-NC mimic, miR-431-5p inhibitor (anti-miR-431-5p), anti-miR-NC, small interfering RNA of RAB9A (si-RAB9A) and si-NC were commercially obtained from GenePharma (Shanghai, China).
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3

Influenza A Virus Infection in Lung Epithelial Cells

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The mouse lung epithelial (MLE‐12) cell lines were purchased from the BeNa Culture Collection. Cells were cultured in Dulbecco's Modified Eagle Medium (DMEM) containing 10% (v/v) fetal bovine serum (FBS), in a humidified atmosphere of 95% air‐ 5% CO2 at 37°C. MLE‐12 cells were cultured in 6 well culture plate, and then the cells were transfected with miR‐205‐5p mimic, miR‐205‐5p inhibitor, miR‐431‐5p mimic, miR‐431‐5p inhibitor, NC or inhibitor negative control (INC), with lipofectamine 2000 for 48 h. miR‐205‐5p inhibitor, miR‐431‐5p inhibitor, INC were synthesized by Genepharma. These miRNA mimic (or respective inhibitor) transfected MLE‐12 cells were simultaneously infected with influenza A virus (MLE‐12 Infection model). The cells cultured in complete medium were considered as normal control. The culture plate was cultured in a 37°C, 5% CO2 incubator. The cells were harvested 48 h after transfection, and Western blot was carried out using the primary antibodies against NP (Abcam) and GAPDH (Cell Signalling) as an internal control.23
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4

LINC01132 and miR-431-5p Overexpression

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To overexpress miR-431-5p and SOX9, transfection of the miR-431-5p mimic (100 pmol; Shanghai GenePharma Co., Ltd.) and pcDNA3.1-SOX9 (4 μg; Sangon Biotech Co., Ltd.) was conducted with Lipofectamine® 2000 reagent (Invitrogen; Thermo Fisher Scientific, Inc.), and the miRNA mimic control (100 pmol; miR-NC; Shanghai GenePharma Co., Ltd.) and pcDNA3.1 (4 μg;) were used as controls. All transfections were performed at room temperature. The transfection duration was 8 h, after which the culture medium was replaced with fresh culture medium.
Small interfering RNAs (siRNAs) targeting LINC01132 (si-LINC01132; 100 pmol) and the miR-431-5p inhibitor were prepared by Shanghai GenePharma Co., Ltd. and used to knock down LINC01132 and miR-431-5p. The negative control (NC) siRNA (si-NC; 100 pmol) and NC inhibitor functioned as the controls for si-LINC01132 and the miR-431-5p inhibitor, respectively. The miR-431-5p mimic sequence was 5′-ACGUACUGCCGGACGUUCUGU-3′ and the miR-NC sequence was 5′-UUGUACUACACAAAAGUACUG-3′. The miR-431-5p inhibitor sequence was 5′-UGCAUGACGGCCUGCAAGACA-3′ and the NC inhibitor sequence was 5′-ACUACUGAGUGACAGUAGA-3′. The si-LINC01132#1 sequence was 5′-AGGAGATAAAAATTTTAAATTAC-3′; the si-LINC01132#2 sequence was 5′-TTCTGTTTTTTGTTTTTTTAAGA-3′; and the si-NC sequence was 5′-CACGATAAGACAATGTAT TT-3′.
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5

Overexpression and Knockdown of miR-431-5p and SOX9 in EOC

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To overexpress miR-431-5p and SOX9, transfection of the miR-431-5p mimic (GenePharma; Shanghai, China) and pcDNA3.1-SOX9 (Shanghai Sangon Co., Ltd.; Shanghai, China) was performed with Lipofectamine ® 2000 (Invitrogen; Thermo Fisher Scienti c, Inc.), and the miRNA mimic control (miR-NC; GenePharma) and empty pcDNA3.1 plasmid were used as controls. Small interfering RNAs (siRNAs) targeting LINC01132 (si-LINC01132) and the miR-431-5p inhibitor were synthesized by GenePharma and used to knock down LINC01132 and miR-431-5p expression in EOC cells. The negative control (NC) siRNA (si-NC; GenePharma) and NC inhibitor served as the control for si-LINC01132 and the miR-431-5p inhibitor, respectively.
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