The largest database of trusted experimental protocols

6 protocols using beclin 1 3495

1

Immunoblotting of Autophagy Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The TGase 2 antibody was obtained from Lab Vision (clone CUB 7402; Fremont, CA, USA), the β-actin (sc-47778), p53 (sc-126) and SQSTM1/p62 (sc-25575) antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA), and ATG5 (#12944), ATG12 (#4180), LC3A/B (#12741) and Beclin-1 (#3495) antibodies were obtained from Cell Signaling Technologies (Beverly, MA, USA). TORIN-2 were purchased from Selleckchem (#S2817, TX, USA).
+ Open protocol
+ Expand
2

Evaluation of Apoptosis and Autophagy

Check if the same lab product or an alternative is used in the 5 most similar protocols
RPMI-1640 medium (11 mM glucose and L-glutamine) and fetal bovine serum were purchased from Gibco (Paisley, UK). Penicillin/streptomycin antibiotic mixture and Dulbecco's phosphate-buffered saline (DPBS) were purchased from WELGENE (Daegu, Korea). 3-(4,5-Dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide (MTT) was obtained from Duchefa (Haarlem, Netherlands). Primary antibodies against poly(ADP-ribose) polymerase (PARP) (9542), caspase-3 (9662), bcl-2 (2876), bax (2772), p62 (5224S), and beclin-1 (3495) were purchased from Cell Signaling Technology (Beverly, MA, USA), and horseradish peroxidase-conjugated secondary antibodies (anti-rabbit, sc-2004; anti-mouse, sc-2005) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Psoralen, isoPsoralen, palmitate, rapamycin, and bovine serum albumin were obtained from Sigma-Aldrich (St Louis, MO). Bakuchiol was purchased from Enzo Life Sciences Inc. (Farmingdale, NY).
+ Open protocol
+ Expand
3

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor tissue or cell lines were lysed in a buffer containing 50 mM Tris-Cl pH 8.0, 150 mM NaCl, 0.02%NaN3, 0.1%SDS, 100 mg/ml phenyl-methylsufonyl fluoride (PMSF), 1 mg/ml Aprotinin, 1%Triton. 10 μg/mL aprotinin, 10 μg/mL leupeptin, 1 mM dithiothreitol, 1 mM paranitrophenyl phosphate, and 0.1 mM Na3VO4 were added as protease and phosphatase inhibitor. After centrifugation, protein samples were subjected to 10% SDS-PAGE and transferred onto PVDF membranes (Roche, Mannheim, Germany). The membranes were blocked in TBST (1 mM Tris-HCl, pH 7.4, 150 mM NaCl, 0.05% Tween-20) containing 5% BSA for 1.5 h and subsequently incubated overnight at 4 °C with diluted primary antibodies against antibodies. All antibodies were used at a dilution of 1:1,000 unless specified otherwise. Mouse monoclonal antibodies were from: R&D (BCAP, MAB4857), Thermo Fisher Scientific (GAPDH, MA5-15738-BTIN), Rabbit polyclonal antibodies were from: CellSignalling (ATG5-2630, p-mTOR-2974), Bioword Technology (AKT-BS1810), Rabbit monoclonal antibodies were from: Millipore (anti-mTOR-04-385), Proteintech (p62-18420-1-AP, β-actin-20536-1-AP), CellSignalling (Beclin-1-3495, LC3B-3868, Caspase-3-9665, Cleaved Caspase-3-9664, PARP-9532, p-AKT-4060).
+ Open protocol
+ Expand
4

Metformin and AMPK Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Metformin, which was purchased from MCE (Greenville, SC, USA), was dissolved in PBS to make a 1 M stock solution. Compound-c, an inhibitor of AMPK, was purchased from Selleck Chemicals (USA). The primary antibodies for use in Western blotting for phospho-AMPK (Thr172) (2535T), AMPK (5831T), phospho-mTOR (Ser2481) (2974), mTOR (2983), β-actin (4970) and beclin1 (3495), as well as LC3 (12741), were purchased from Cell Signaling Technology (Danvers, MA, USA). Beclin1 antibody for immunohistochemistry was obtained from Proteintech Group Inc. (Wuhan, China).
+ Open protocol
+ Expand
5

Evaluating Ginsenoside Rg1 and Doxorubicin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ginsenoside Rg1 (purity of 98%) was purchased from manster biotechnology co., Ltd. (Chengdu, China). Doxorubicin (a purity of 98%) was procured from Aladdin Industrial Company (Shanghai, China). Antibodies against LC3A/B (4108), P70S6K (2708), p-P70S6K (9234), P62 (23214) and Beclin1 (3495) were purchased from Cell Signaling Technology (Shanghai, China). Antibody against ATF6 (sc-22799), XBP1 (sc-7160) and GFAT1 (sc-134894) were purchased from Santa Cruz Biotechnology (Shanghai, China). Antibodies against IRE1 (ab37073), ATG5 (ab108327), TIF1 (ab174287), GRP78 (ab108615), HRD1 (ab170901), FAM134B (ab151755), JNK1 (ab179461) and GAPDH (abb181602) were purchased from Abcam (Shanghai, China).
+ Open protocol
+ Expand
6

Autophagy Modulators in Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Niclosamide (N3510), chloroquine (C6628), MG132 (474790), 3-Methyladenine (3MA) (M9281), and DMSO (D2650) were purchased from Sigma-Aldrich. The following primary antibodies were used: GFP (A11122) from ThermoFisher Scientific; LC3B (3868), ULK1 (8054), phospho-ULK1 (14202), mTOR (2983), phospho-p70S6K1 (9205), and Survivin (2808) from Cell Signaling; Beclin1 (3495, Cell Signaling), β-catenin (sc-7963), c-Myc (sc-40), and β-actin (sc-47778) from Santa Cruz Biotechnology. Alexa Fluor™ 488 (A32723) and Alexa Fluor™ 647 (A32728) labeled secondary antibodies were from Invitrogen.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!