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2 protocols using rabbit anti v5 d3h8q

1

Immunofluorescence Assay for Protozoan Parasites

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Parasites were fixed for IFA using 4% Paraformaldehyde and 0.03% glutaraldehyde, then permeabilized with 0.1% Triton-X100. Primary antibodies used were rat-anti-HA 3F10 (Roche, 1:100), mouse-anti-HA 6E2 (Cell Signaling Technology, 1:100), mouse-anti-V5 TCM5 (eBioscence, 1:100), rabbit-anti-V5 D3H8Q (Cell Signaling Technology, 1:100), and mouse-anti-PfPMV (from D. Goldberg 1:1). Secondary antibodies used were Alexa Fluor 488 and Alexa Fluor 546 (Life Technologies, 1:100). Cells were mounted to slides using ProLong Diamond with DAPI (Invitrogen). Fixed and stained cells were imaged using a DeltaVision II microscope system with an Olympus IX-71 inverted microscope. Images were collected as a Z-stack and deconvolved using SoftWorx, then displayed as a maximum intensity projection. Images were processed using Adobe Photoshop, with adjustments made to brightness and contrast for display purposes.
For imaging of parasite cultures using light microscopy, aliquots of culture were smeared onto glass slides and field-stained using Hema3 Fixative and Solutions (Fisher Healthcare), which is comparable to Wright-Giemsa staining. Slides were imaged using a Nikon Eclipse E400 microscope with a Nikon DS-L1-5M imaging camera. To measure parasite size, images were taken and parasites measured using ImageJ (NIH).
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2

Western Blot Analysis of Parasite Proteins

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Western blots were performed as previously described [55 (link)]. Briefly, ice-cold 0.04% saponin in 1x PBS was used to isolate parasites from host cells. Parasite pellets were subsequently solubilized in protein loading dye to which Beta-mercaptoethanol had been added (LI-COR Biosciences) and used for SDS-PAGE. Primary antibodies used in this study were rat-anti-HA 3F10 (Roche, 1:3000), mouse-anti-HA 6E2 (Cell Signaling Technology, 1:1000), rabbit-anti-HA 715500 (Thermofisher, 1:100), mouse-anti-V5 TCM5 (eBioscence, 1:1000), rabbit-anti-V5 D3H8Q (Cell Signaling Technology, 1:1000), rabbit anti-PfBiP MRA-1246 (BEI resources, 1:500), rabbit-anti-PfEF1α (from D. Goldberg, 1:2000), and mouse-anti-PfPMV (from D. Goldberg 1:400). Secondary antibodies used were IRDye 680CW goat-anti-rabbit IgG and IRDye 800CW goat-anti-mouse IgG (Li-COR Biosciences, 1:20,000). Membranes were imaged using the Odyssey Clx Li-COR infrared imaging system (Li-COR Biosciences). Images of membranes were processed using ImageStudio, the Odyssey Clx Li-COR infrared imaging system software (Li-COR Biosciences). Densitometry analysis of western blot signal was also performed using ImageStudio (Li-COR Biosciences).
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