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3 protocols using sc 197

1

Comprehensive Antibody Validation for Signaling Pathway Analysis

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Specified antibodies to the following proteins were used for immunoblotting (IB), immunoprecipitation (IP), immunofluorescence (IF), and immunohistochemistry (IHC): phospho-Akt1(S473) (1:2000, IB; ab81283, abcam), phospho-Bad(S112) (1:1000, IB, no. 5284, Cell Signaling), phospho-BIM(S69) (1:400, IB; no. 4581, Cell Signaling), phospho-Elk1 (S383) (1:1000, IB; no. 9181, Cell Signaling), phospho-Elk1 (S383) (1:1000, IB; ab34270, abcam), phospho-ERK1/2(TEY) (1:1000, IB; no. 9101L, Cell Signaling), ERK1/2 (1:1000, IB; no. 9102, Cell Signaling), phospho-ERK1/2(T188) (1:1000, IB; 1:500 IHC; Lorenz et al., 2009 (ref. 13 (link)) or A010-40AP, Badrilla), Flag (1:10,000, IB or 1:200, IF; IP 5.6μg/sample;; F3165, Sigma), phospho-Foxo3a(S294) (1:1000, IB; no. 5538, Cell Signaling), Gβ (1:5000, IB; sc-378, Santa Cruz Biotechnology), HA (1:5000, IB; IP 5μg/sample; MMS-101R, Covance), HA (1:500, IF; no. 3724, Cell Signaling), Max (1:200, IF; sc-197, Santa Cruz Biotechnology), c-Myc (1:1000, IB; sc-789, Santa Cruz Biotechnology), c-Myc (1:350, IF; M4439, Sigma), phospho-p70(S6) (1:1000, IB; no. 9204, Cell Signaling), and phospho-p90RSK(S380) (1:5000, IB; ab32203, abcam).
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2

Western Blot Analysis of MAX and MYC Proteins

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Total protein was isolated as previously described.23 (link) Twenty microgram of total protein for MAX and 10 μg for MYC were separated by electrophoresis on 10% Mini-Protean gels (Bio-Rad, Hercules, CA, USA) and transferred to polyvinylidene difluoride (PVDF) membranes using a Semi-dry Trans-Blot System (Bio-Rad). The proteins were blocked (Tris-buffered saline with Tween 20 and 5% bovine serum albumin for 4 h at room temperature (RT)) and incubated overnight at 4°C with a MAX antibody (1:2000; sc-197, Santa Cruz Biotechnology, Santa Cruz, CA, USA)24 (link) or a MYC antibody (1:1000; sc-40).25 (link) The blots were then incubated with secondary antibodies (1:4000; sc-2004 or sc-2005, 1 h at RT). For the loading control, the membranes were stripped with 5% acetic acid for 5 min at RT, blocked with 5% bovine serum albumin for 1 h and incubated with anti-β-Actin (1:1000; sc-47778) or anti-γ-tubulin (1:10 000; T6557, Sigma-Aldrich, St. Lewis, WA, USA) antibodies overnight at 4 °C. The protein levels were detected with enhanced chemiluminescence (Bio-Rad) and analyzed with ImageQuant 7.0 (GE Healthcare Life Sciences, Piscataway, NJ, USA). The levels of both loading control proteins (β-actin and γ-tubulin) were similar between groups. The optical densities of the MAX and MYC bands were determined by normalization to the corresponding control bands.
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3

Retinal Protein Expression Profiling

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The retinal tissues were lysed on the ice, followed by protein extraction. The protein concentration was determined by BCA assay kit (Wanleibio, Shenyang, China). The proteins were subjected to SDS-PAGE (8–13%) and transferred to PVDF membranes. Then, membranes were blocked with non-fat milk dissolved in Tween-20/TBS buffer. Subsequently, the membranes were incubated with primary antibodies against NgR (1:10,000; ab184556; Abcam, Cambridge, UK), RhoA (1:200; sc-197; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), Rock1 (1:200; sc-374388; Santa Cruz Biotechnology, Inc.), Bcl-2 (1:400; BA0412; Boster, Wuhan, China), Bax (1:400; BA0315; Boster), Caspase-3 (1:1000; ab2302; Abcam), F-actin (1:500; ab205; Abcam), growth-associated protein-43 (GAP-43) (1:200; sc-33705; Santa Cruz Biotechnology, Inc.) at 4°C overnight and then with secondary antibody (1:5,000; horseradish peroxidase-labeled IgG; WLA023 and WLA024; Wanleibio) for 45 min at 37°C. The protein bands were visualized via ECL reagent and analyzed by Gel-Pro Analyzer (Media Cybernetics, Rockville, MD, USA).
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