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X tremegene hp dna transfection reagent

Manufactured by Merck Group
Sourced in United States, Germany

X-tremeGENE HP DNA Transfection Reagent is a laboratory product designed for the efficient transfection of genetic material into a wide variety of cell lines. It facilitates the delivery of DNA into cells, enabling researchers to study gene expression, protein function, and other cellular processes.

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160 protocols using x tremegene hp dna transfection reagent

1

BmN4 Cell Transfection and RNA Interference

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BmN4 cells were cultured at 27°C in IPL-41 medium (AppliChem) supplemented with 10% fetal bovine serum. For immunoprecipitation experiments, a total of 5–7.5 µg of plasmid and dsRNAs were transfected into BmN4 cells (2–2.5 × 106 cells per 10 cm dish) with X-tremeGENE HP DNA Transfection Reagent (Sigma), and the transfected cells were harvested after 4 d. For cotransfection experiments, the second transfection was performed 2 d after the first transfection, and the cells were harvested after an additional 4 d. For immunofluorescence experiments, a total of 0.4 µg of plasmid and dsRNAs were transfected into BmN4 cells (4–6 × 104 cells per glass bottom 35 mm dish) with X-tremeGENE HP DNA Transfection Reagent (Sigma), and cells were fixed 4 d later. For Supplemental Figure 2, transfection was repeated 2 d later and cells were fixed 4 d after the second transfection. For library preparation, 5 µg of dsRNAs were transfected into BmN4 cells (8 × 105 cells per 10 cm dish) with X-tremeGENE HP DNA Transfection Reagent (Sigma) every 3 d four times. dsRNA preparation was described previously (Izumi et al. 2020 (link)). Template DNAs were prepared by PCR using primers containing T7 promoter listed in Supplemental Table 1.
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2

Wnt Pathway Modulation and Genetic Perturbation

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For the experiments depicted in Figure 4F, cells were treated with 3 µM CHIR99021 (DMSO as a vehicle control) or 50 ng/ml purified Wnt3a (RnD) (BSA as a vehicle control) for 4 or 24 hours prior to harvesting. For the experiments depicted in Figure 4G, BC44 cells were plated in a concentration of 150,000 cells/well in 6-well plates and transfected the next day with 2 μg of the designed plasmids and X-tremeGENE HP DNA Transfection Reagent (Sigma) using a 1:1 ratio of μl X-tremeGENE HP DNA Transfection Reagent to μg DNA. First, DNA was diluted in Opti-MEM reduced serum media (GIBCO) to a final concentration of 1 μg plasmid DNA/100 μl medium (0.01 μg/μl); then X-tremeGENE HP DNA Transfection Reagent (1 μl/μg DNA) was vortexed and added without touching the walls of the Eppendorf tube; the mix was incubated for 20 minutes at room temperature. Cell culture media was refreshed before adding the transfection mix in a dropwise manner. Empty pGlomyc_3.1 vector was transfected as a negative control. Cells were harvested 24 hours after transfection.
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3

Transfection and Maintenance of HK2 Cells

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HK2 cells (ATCC® CRL‐2190™) were grown in DMEM‐HAM’s F12 (GIBCO‐Life Technologies); supplemented with 5% fetal calf serum, 50 IU/ml penicillin, 50 mg/ml streptomycin, 5 μg/ml insulin, 5 μg/ml transferrin, 5 ng/ml selenium (LuBio Science). Cells were grown at 37°C in 5% CO2 and at 98% humidity. Media, serum and reagents for tissue culture were purchased from GIBCO (Invitrogen).
HK2 cells were transfected with different plasmids using X‐tremeGENE HP DNA transfection reagent (Sigma‐Aldrich) according to the manufacturer's instructions and incubated for 18–24 h before fixation or live‐cell imaging. The HK‐2 cell line was checked for mycoplasma contamination by a PCR‐based method. All cell‐based experiments were repeated at least three times.
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4

Maintaining and Transfecting BHK-21 and HeLa Cells

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tsBN2,40 (link) Baby hamster kidney 21 cells (BHK-21) or HeLa were grown and maintained in 1× Dulbecco's modified Eagle's (DMEM) F12 medium (ThermoFischer Scientific, #11330–032) or DMEM glutamax (ThermoFischer Scientific, #21885–025) supplemented with 10% fetal bovine serum (FBS, v/v) (ThermoFischer Scientific, #10500064) and 1% penicillin-streptomycin (v/v) in a humidified atmosphere containing 5% CO2. The BHK-21 and HeLa cells were maintained at 37°C, whereas tsBN2 cells were cultured at 33°C. For interaction studies, the cells were treated for 4 h at 33°C (permissive temperature) or 39.5°C (restrictive temperature) before crosslinking. For transfection of cells with plasmids encoding Samp1-YFP, X-treme gene HP DNA transfection reagent (Sigma, #000000006366236001) was used and cells were analyzed 24 h post-transfection.
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5

HOXA-AS3 Knockdown Protocol

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HOXA-AS3-sh2 and sh4 (sequences were listed in Supplementary Table 1) were cloned in the lentiviral vector pLKO.1. The positive clones were verified by DNA sequencing. The correct plasmids were cotransfected with the packaging vectors pLP1, pLP2 and pLP/VSVG into 293T cells using X-tremeGENE HP DNA transfection reagent (Sigma-Aldrich, USA). Virus supernatants were collected and purified by ultracentrifugation. For infection, LN229 cells were then maintained in the medium containing pLKO.1/pLKO.1-sh4 lentivirus. After 48 hours, the stable line was selected by puromycin (1.5 μg/ml) and used for the in vivo assay.
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6

Investigating Influenza Polymerase Complex Assembly

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A549 cells were respectively cotransfected with pcDNA3-PB1, pcDNA3-PB2, pcDNA3-PA, or pcDNA3-NP, and pol I-WSN-NS non-coding region minigenome reporter, using X-tremeGENE HP DNA Transfection Reagent (Sigma), as well as 20 nM of VIM siRNA (4390824, Silencer Select siRNAs; Thermo Fisher Scientific) or control siRNA (4390843, Silencer Negative Control No. 1 siRNA; Thermo Fisher Scientific), using Lipofectamine RNAiMAX (Invitrogen) transfection reagent according to the manufacturer’s instructions. At 48 h after transfection, the cells were harvested and fractionated according to the experimental procedures described in the handbook provided along with the NE-PER Nuclear and Cytoplasmic Extraction Reagents (78833; Thermo Fisher Scientific). Approximately 60 μg of protein lysate from the cytosol fraction and lysate from the nuclear fraction at half the volume of the cytosol fraction were further used to analyze the expression of NP, vimentin, LaminB1, and GAPDH, using western blotting.
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7

Transfection and TGFβ-1 Stimulation in HEK293 Cells

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HEK293 cells (American Type Culture Collection) were maintained in DMEM base media supplemented with 10 % FBS (Gemini Bio-Products, NC), 100 μg/ml streptomycin, and 100 U/ml penicillin (Gibco). Cells were cultured at 37 °C and 5 % CO2 and were sub-cultured upon reaching 80 % confluence. For transfection, 2.5 × 105 cells were seeded in 12-well plates in triplicates per each condition. The following day, cells were transfected for 24 h with X-tremeGENE™ HP DNA Transfection Reagent (6,366,236,001, Sigma-Aldrich) and 1 μg/well plasmid DNA constructs expressing pcDNA3.1/NT-GFP-TOPO™ (K481001, NT-GFP Fusion TOPO™ Expression Kit, Invitrogen™), CS2 Flag-SMAD3 (14052, Addgene), and mutant CS2 Flag-SMAD3 (p.I67S). After transfection, cells were stimulated with 5 ng/mL of TGFβ-1 (7754-BH, R&D) for another 24 h and harvested for RNA.
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8

SARS-CoV-2 Infection of Mammalian Cells

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Human cervical carcinoma cells HeLa and monkey kidney epithelial cells Vero-E6 were maintained in Dulbecco’s modified Eagle’s medium (DMEM; Sigma-Aldrich) supplemented with 10% fetal bovine serum (FBS; Thermo Fisher Scientific/Gibco, Waltham, MA, USA). For transfection, HeLa cells were plated onto a 4-chamber 35 mm dish with a glass bottom (Cellvis, Mountain View, CA, USA). Plasmid DNA was transfected with X-tremeGENE HP DNA Transfection Reagent (Sigma-Aldrich) according to the manufacturer’s protocol. For SARS-CoV-2 infection, one day prior to infection, Vero-E6 cells were seeded in a 4-chamber 35 mm dish with a glass bottom (Cellvis) at 180,000 cells per chamber. The next day, cells were infected with the SARS-CoV-2 strain hCoV-19/Czech Republic/NRL_6632_2/2020 in our BSL3 facility at MOI 0.5 in DMEM medium supplemented with 2% FBS and incubated at 37 °C in the CO2 incubator for 24–72 h.
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9

Construction and Purification of Recombinant MVA

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MVA vectors were constructed as previously described19 (link). Briefly, confluent monolayers of DF-1 cells in a 6-well tissue culture plate were infected with MVA at a multiplicity of infection (MOI) of 0.1 and transfected with 1 µg of a shuttle plasmid, using X-tremeGENE HP DNA transfection reagent (Sigma-Aldrich, St. Louis, MO). Infected/transfected cells were harvested after 48 h. About 70% of each cell harvest volume was centrifuged, and cell pellets were lysed in RIPA buffer for Western blot analysis to identify clones expressing the spike form of interest. The remaining cell harvest (~30%) was used for the subsequent isolation of recombinant MVA.
Recombinant MVA vectors were isolated by three to five serial plaque purifications on DF-1 cells; purified recombinant MVA vectors were expanded in DF-1 cells. Recombinant vectors for animal inoculation were further purified on 36% sucrose cushion as previously described20 ,21 (link) and titrated in DF-1 cells.
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10

Bispecific Antibody Construction Workflow

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Variable light-chain (VL) and variable heavy-chain (VH) domains of the anti-CD3 OKT 3 hybridoma and the anti-CD16 3G8 hybridoma were cloned into a pcDNA 3.1 vector (Invitrogen, Carlsbad, CA) by standard cloning techniques, followed by the DNA sequence of the LRPAP1 epitope, respectively (Supplemental Digital Figure 1, http://links.lww.com/HS/A179). The single-chain fragment (scFv) containing the variable heavy and light chain of the anti-CD16 hybridoma, linked by a glycine-serine linker, was bought from GenScript (GenScript USA Inc., Piscataway, NJ).
The primers used for PCR amplification of anti-CD3 scFv and the LRPAP1 epitope are shown in Table 1.
VH and VL were linked by a glycine-serine linker, as was the LRPAP1 epitope to VL, resulting in a VH-(GlySer)4-VL-(GlySer)3-LRPAP1 peptide chain. The LRPAP1 epitope was tagged with a histidine tail for subsequent detection and purification.
PCR products, amplified with these primers, were subcloned into a PCR 2.1 vector using the TOPO TA Cloning Kit (ThermoFisher Scientific, Waltham, MA) and then assembled in the pcDNA 3.1 vector. The final cloning product was used to transfect HEK 293T cells for production of bispecific constructs using X-tremeGENE HP DNA Transfection Reagent (Sigma-Aldrich Chemie GmbH, Munich, Germany).
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