The largest database of trusted experimental protocols

11 protocols using anti p erk1 2 t202 y204

1

Antibody-based detection of ALK and AKT signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies used were: anti-pan-ERK from BD Transduction Laboratories (Franklin Lakes, NJ, USA), anti-pALK (Y1604), anti-pAKT (S473), anti-AKT, anti-ERK1/2 and anti-pERK1/2 (T202/Y204) from Cell Signalling Technology (Danvers, MA, USA). The monoclonal antibodies mAb31, mAb46 and mAb135 have been described previously [28 (link),31 (link)]. The horseradish peroxidase conjugated secondary antibodies goat anti-rabbit IgG and goat anti-mouse IgG were purchased from Thermoscientific (Waltham, MA, USA). The ALK inhibitor crizotinib was purchased from ChemExpress (Shanghai, China). Other ALK inhibitors were purchased from Selleck Chemicals (Houston, TX, USA). Human ALK ligand ALKAL1 was produced by GenScript (Piscataway, NJ, USA).
+ Open protocol
+ Expand
2

Comprehensive Immunoblotting Profiling of Cellular Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Five-7 x 106 cells were prepared by lysis in a buffer made up of 20 mM Tris, 150 mM NaCl, 2 mM EDTA (ethylenediaminetetraacetic acid), 2 mM EGTA (ethylene glycol-tetra-acetic acid), 0.5% v/v Triton X-100 supplemented with protease inhibitor cocktail (Sigma), 1 mM DTT (dithiothreitol; Amersham Biosciences), 1 mM PMSF (phenyl-methyl-sulfonyl fluoride; Sigma), 1 mM okadaic acid (Sigma) and phosphatase inhibitor cocktail (Thermo Scientific). Proteins were subjected to SDS-PAGE, transferred to PVDF membranes and immunoblotted with the following primary Abs: anti-CK2α (provided by Dr. M. Ruzzene, University of Padova, Italy), anti-CK2β, anti-RELA, anti-FOXO1 (Abcam), anti-pRELA S529 (recognizes S527 in mouse), anti-IRF4, anti-BLIMP-1, anti-BCL6 (Santa Cruz), anti-GAPDH (Ambion), anti-pAKT S129 (provided by Dr. M. Ruzzene, University of Padova, Italy), anti-AID (Invitrogen), anti-NOTCH2 (D76A6), anti-pAKT S473, anti-AKT, anti-pERK1/2 T202/Y204, anti-pBTK Y223, anti-ERK1/2, anti-pPTEN S380/T382/T383, PTEN, anti-pFOXO1 S256, anti-pSTAT6 Y705, anti-STAT6 (Cell Signaling). Secondary Abs: anti-rabbit IgG HRP-linked Ab (Cell Signaling), HRP labeled goat anti-mouse IgG (KPL), goat anti-rat IgG HRP-conjugated (Calbiochem), donkey anti-goat IgG HRP-conjugated (Santa Cruz).
+ Open protocol
+ Expand
3

Investigating ALK signaling in PC12 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
PC12 cells were transfected with different ALK constructs by electroporation. Cells were serum-starved for 36 hours prior to stimulation with 1 μg/ml of the activating mAb46 for 30 minutes Cells were washed with ice-cold PBS prior to harvest in lysis buffer [25 mM of Tris-Cl, pH7.5, 150 mM of NaCl, 1% (v/v) Triton X-100, 1 mM of DTT, protease inhibitor cocktail tablet (Roche)]. Cell lysates were cleared by centrifugation at 14,000 rpm for 15 minutes at 4°C. Samples were boiled in 1x SDS sample buffer and analyzed by immunoblotting. Primary antibodies used for immunoblotting were: anti-pan-ERK (1:10,000) from BD Transduction Laboratories (Franklin Lakes, NJ); anti-pALK (Y1604) and anti-pERK1/2 (T202/Y204) from Cell Signaling Technology (Danvers, MA); anti-FAM150A and anti-FAM150B antibodies from Atlas Antibodies (Stockholm). Monoclonal antibody 135 (anti-ALK) was produced in the Hallberg laboratory against the extracellular domain of ALK as described [20 (link)]. Horseradish-peroxidase-conjugated secondary antibodies goat anti-rabbit IgG and goat anti-mouse IgG (1:5,000) were from Thermo Scientific (Waltham, MA).
+ Open protocol
+ Expand
4

Comprehensive Immunoblotting Antibody Panel

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-IRS-1, anti-pIRS-1 (S307), anti-AKT (T308), anti-AKT, anti-p-mTOR (S2448), anti-mTOR, anti-p-p70S6K (T389), anti-p70S6K, anti-p-S6 (S235/S236), anti-S6, anti-p-p38MAPK (T180/Y182), anti-p38MAPK, anti-p-ERK1/2 (T202/Y204), anti-ERK1/2, anti-p-SAPK/JNK (T183/Y185), anti-SAPK/JNK, anti-p-AMPK (T172), anti-AMPK, anti-ACC1, and anti-FASN monospecific antibodies were purchased from Cell Signaling (Danvers, MA). Insulin, Oil Red O, and anti-actin antibodies were obtained from Sigma-Aldrich (St. Louis, MO). Anti-SREBP1 antibody was bought from Becton-Dickinson (Franklin Lakes, NJ). Anti-SREBP2 and anti-ChREBP antibodies were bought from R&D Systems (Minneapolis, MN). Combined protease and phosphatase inhibitor cocktails (Halt™) and Tissue-Tek™ optimum cutting temperature (OCT) compound were bought from Thermo Fisher Scientific (Hampton, NH). Forward and reverse oligonucleotide primers (Additional file 1: Table S1) to carry out quantitative PCR analysis were designed according to a published program (OligoArchitectTM online, Sigma-Aldrich, St. Louis, MO). DNA primers were synthesized by Integrated DNA Technologies (Coralville, IA).
+ Open protocol
+ Expand
5

Histone Demethylase Regulation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rabbit anti-KDM4A, anti-ERK1/2, anti-p-ERK1/2 (T202/Y204), anti-c-Jun, and anti-p-c-Jun (S63) were purchased from Cell Signaling Technology (Danvers, MA, USA). Rabbit anti-KDM4B was purchased from Bethyl Laboratories (Montgomery, TX, USA). Rabbit anti-KDM4C was purchased from Novus Biological (Littleton, CO, USA). Rabbit anti-H3K9me3 was purchased from Active Motif (Carlsbad, CA, USA). Rabbit anti-IgG, and anti-p-Tyrosine were purchased from Millipore (Billerica, MA, USA). Mouse anti-CagA, and anti-IgG were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Mouse anti-β-Actin was purchased from Sigma. Lentiviral vector pLKO-control (pLKO), pLKO-shKDM4A (sh4A#1, TRCN0000234912; sh4A#2, TRCN0000234914), -shKDM4B (sh4B#1, TRCN0000018016; sh4B#2, TRCN0000379460), -shKDM4C (sh4C#1, TRCN0000235047; sh4C#2, TRCN0000235048) plasmids were purchased from The RNAi Consortium (TRC).
+ Open protocol
+ Expand
6

Antibody-based detection of ALK signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies used were anti-pan-ERK (1:10,000; BD Transduction Laboratories), anti-ALK (for immunofluorescence 1:1000; ab4061, Abcam), anti-ALK (D5F3, 1:5000; Cell Signaling Technology), anti-ALK mAb135 (1:2000; [Witek et al., 2015 (link)]), anti-pERK5 (1:1000; Cell Signaling Technology), anti-pALK-Y1278 (1:2000; Cell Signaling Technology), anti-pALK-Y1604 (1:2000; Cell Signaling Technology) and anti-pERK1/2-T202/Y204 (1:2000; Cell Signaling Technology), anti-FAM150A (1:4000, Atlas Antibodies), anti-HA (1:1000 for immunofluorescence, 1:6000 for immunoblotting; 16B12, Covance). The activating monoclonal antibody mAb46 and ALK monoclonal antibodies mAb13, mAb48 were a kind gift from M. Vigny and have been described previously (Moog-Lutz et al., 2005 (link)). The ALK inhibitor crizotinib was purchased from Chem Express (Shanghai).
+ Open protocol
+ Expand
7

Epithelial-Mesenchymal Transition Mechanisms

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used: anti-Pellino-1 (F-7), anti-β-TrCP(H-85) (Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-actin, anti-Flag M2 (Sigma, St. Louis, MO, USA), anti-Slug, anti-Snail, anti-E-cadherin, anti-β-catenin, anti-Vimentin, anti-ERK1/2, anti-p-ERK1/2 (T202/Y204), anti-Akt, anti-p-Akt (S473), anti-GSK3β, anti-p-GSK3β (S9) (Cell Signaling Technology, Danvers, MA, USA), anti-HA, anti-Myc (Roche, Basel, Switzerland). The following reagents were used: LY294002, PD98059 (Calbiochem, San Diego, CA, USA), MG132, cycloheximide, dimethyl sulfoxide (DMSO) (AG Scientific, San Diego, CA, USA) and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (Sigma), EGF, mitomycin C (Sigma) and EGFR kinase inhibitor AG1478 (Selleckchem, Houston, TX).
+ Open protocol
+ Expand
8

Measuring ERK1/2 Activation in Thyrospheres

Check if the same lab product or an alternative is used in the 5 most similar protocols
To measure the extracellular signal-regulated protein kinase (ERK1/2), thyrospheres were lysed and subjected to Western blot analysis, as previously described (20 (link)). The following antibodies against total and phosphorylated ERK1/2 were purchased from Cell Signaling Technology (Beverly, MA, USA): anti-ERK1/2, anti-P-ERK1/2 (T202/Y204) and anti-Vinculin. Bands were detected digitally using the Odyssey Fe imaging system (Li-COR Bioscience, Lincoln, NE, USA) and the blots were then quantified using the Li-COR Image Studio software version 5.2.5.
The metal concentration used for evaluating ERK1/2 activation at 5, 15 and 30 minute time points was selected on the basis of the peak effect of each metal on BrdU incorporation.
ERK phosphorylation was also measured in cells exposed to metals in the presence of PD98059 (20 μM) that was kept in the culture medium throughout the entire period of exposure to metals.
+ Open protocol
+ Expand
9

Immunoblotting Protocol for Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunoblotting experiments were carried out as previously described.54 (link) Briefly, after desired treatment, cultured cells were lysed in PB/Triton buffer (7.74 mM Na2HPO4, 2.26 mM NaH2PO4, 5 mM EDTA, 5 mM EGTA, 100 mM NaCl, 10 mM Na4P2O7, 50 mM NaF, 1 mM Na3VO4, 1% Triton X-100), and clarified lysates were mixed with Laemmli sample buffer (Bio-Rad 1610747) and β-mercaptoethanol and boiled for 10 min. Lysed samples were subjected to electrophoresis using Bio-Rad’s Mini-PROTEAN system (1658026FC). After separation, protein was transferred to a polyvinylidene fluoride membrane (Bio-Rad 1704273), followed by standard blotting procedure. Primary antibodies were obtained from Cell Signaling Technology: anti-pTrkA (Y490) (CST 9141S), anti-pAKT (T308) (CST 9275), anti-AKT (CST 9272), anti-pERK1/2 (T202+Y204) (CST 9101), anti-ERK1/2 (CST 9102), and anti-GAPDH (CST 2118). HRP-conjugated secondary antibody (CST 7074) was used for protein band detection. Protein bands were visualized by chemiluminescence (Bio Rad 1705060).
+ Open protocol
+ Expand
10

Western Blot Analysis of Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
After desired treatment, cultured cells were moved to ice, rinsed with ice cold PBS, and lysed in RIPA buffer (25 mM Tris–HCl, 150 mM NaCl, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS) supplemented with protease and phosphatase inhibitor cocktails (Roche 04906837001 and 04693132001). Clarified lysates were mixed with Laemmli sample buffer (Bio-Rad 1,610,747) and β-mercaptoethanol and boiled for 10 min. Lysed samples were subjected to electrophoresis using Bio-Rad’s Mini-PROTEAN system (1658026FC). After separation, protein was transferred to a nitrocellulose membrane (Bio-Rad), followed by standard blotting procedure. Primary antibodies were obtained from Cell Signaling Technology: anti-pAKT (T308) (CST 9275), anti-AKT (CST 9272), anti-pERK1/2 (T202 + Y204) (CST 9101), anti-ERK1/2 (CST 9102), and anti-GAPDH (CST 2118). HRP-conjugated secondary antibody (CST 7074) was used for protein band detection. Protein bands were visualized by chemiluminescence (Bio Rad 1,705,060) using a ChemiDoc imaging system.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!