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4 protocols using anti qki

1

Western Blot Analysis of Protein Expression

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Cells and tissues were harvested in sampling buffer [62.5 mmol/L Tris-HCl (pH 6.8), 10% glycerol, 2% sodium dodecyl sulfate (SDS)] and heated for 5 minutes at 100°C. Protein concentration was determined with the Bradford assay using a commercial kit purchased from Bio-Rad Laboratories (Hercules, CA, USA). Equal quantities of protein were separated electrophoretically on 10% SDS/polyacrylamide gels and transferred onto polyvinylidene difluoride membranes (Roche, Basel, Switzerland). The membranes were probed with diluted antibody. The expression of target proteins was determined with horseradish peroxidase–conjugated anti-rabbit immunoglobulin G (IgG)/anti-mouse IgG (Sigma-Aldrich, St Louis, MO, USA) and enhanced chemiluminescence (Pierce, Rockford, IL, USA) according to the manufacturers’ suggested protocols. The membranes were stripped and reprobed with an anti–β-actin mouse monoclonal antibody (Sigma-Aldrich) as a loading control. The related antibodies were anti-Smad2/3, anti–NF-κB inhibitor (IκBα), anti–matrix metalloproteinase 9 (MMP9), anti–phosphorylated (p)-Smad2, anti–p-Smad3, anti-Smad2, anti–vascular endothelial growth factor (VEGF) (Cell Signaling Technology, Beverly, MA, USA), anti-QKI, and anti–green fluorescent protein (GFP) (Abcam, Cambridge, MA, USA).
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2

iPSC Differentiation into NPCs and Neurons

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Episomally derived human induced pluripotent stem cells were differentiated using a combination of SMAD inhibition and retinoid signaling41 (link),42 (link). Neural progenitor cells (NPCs) and neurons were characterized and harvested at Day 21 and Day 35 of the differentiation protocol, respectively, for quantification of QKI expression. Antibodies: anti-PAX6 (Biolegend 901301), anti-NCad (BD Biosciences 610920), anti-Tuj1 (Abcam ab78078), anti-NeuN (Abcam ab177487), anti-QKI (Abcam ab126742).
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3

Glioblastoma Xenograft Mouse Model

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Glioblastoma cells (5 × 105) were stereotactically implanted into the brains of nude mice (n = 5 per group). The mice were monitored daily and euthanized when moribund. Whole brains were removed, paraffin-embedded, sectioned into 4-μm thick slides, and stained with hematoxylin–eosin (H&E) or with anti-QKI (Abcam), anti-MMP9 (Cell Signaling Technology), or anti-VEGF (Cell Signaling Technology) antibodies. Images were captured using an AxioVision Rel. 4.6 computerized image analysis system (Zeiss, Jena, Germany).
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4

Western Blot Analysis of Cell Markers

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Equal amounts of cell extracts were subjected to SDS-PAGE and transferred to nitrocellulose membranes (Bio-Rad, Hercules, CA, USA). The following primary antibodies were used: anti-ZO-1 polyclonal (1:1000, Abcam, Cambridge, MA, USA), anti-E-cadherin (1:1000, Abcam, Cambridge, MA, USA), anti-Vimentin polyclonal (1:500, Abcam, Cambridge, MA, USA), anti-QKI (1:400; Abcam, Cambridge, MA, USA). Anti-rhoGDI (1:1000, Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-GAPDH (1:500, Santa Cruz Biotechnology, Santa Cruz, CA, USA) were used as internal control.
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