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Rhoa pull down activation assay biochem kit

Manufactured by Cytoskeleton
Sourced in United States

The RhoA Pull-down Activation Assay Biochem Kit is a laboratory equipment product designed for the quantitative measurement of active RhoA protein levels in cell lysates. The kit provides the necessary reagents and protocols to perform the pull-down assay, which isolates the GTP-bound, active form of RhoA for further analysis.

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27 protocols using rhoa pull down activation assay biochem kit

1

Measuring Active RhoA Levels

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HEK293 cells cultured in Dulbecco’s modified eagle medium plus 10% Fetal bovine serum (Sigma) in 15 cm dishes were cultured to 70% confluency and transfected with 15 μg deoxyribonucleic acid (DNA) encoding TrioFL wild type and variants using Turbofect transfection reagent (Thermo Fisher) at a 1:2 ratio of DNA to Turbofect. Active Rho levels were measured using the RhoA Pull-Down Activation Assay Biochem Kit (bead pull-down format) following manufacturer’s instructions (Cytoskeleton, Inc.). Briefly, 24 h after transfection, cells were serum starved for an additional 24 h and lysed using provided lysis buffer. Protein concentrations were quantified using DC Protein Assay (BioRad), samples were adjusted to the same concentration using provided lysis buffer and then snap frozen in liquid N2. Lysate with 600 μg of protein was added to 30 μL GST-tagged Rhotekin-RBD protein bound to sepharose beads. Samples were incubated while rocking at 4 °C for 1.5 h. Beads were then washed, eluted in Laemmli sample buffer, and analyzed by western blot using a mouse monoclonal anti-RhoA antibody (Cytoskeleton, Inc. Cat # ARH04) to measure the ratio of active to total RhoA. Bands were quantified using ImageJ software (NIH).
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2

Quantitative Measurement of Active RhoA

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The RhoA pull-down assay was performed using the RhoA Pull-down Activation Assay Biochem Kit (BK036, Cytoskeleton, Inc, USA) following the protocol provided by the manufacturer. Briefly, cells were lysed in lysis buffer and supplemented with 1 mM Protease Inhibitor Cocktail. Cell lysates were harvested rapidly on ice with a cell scraper, and centrifuged at 15,000 rpm for 5 min at 4°C. At least 5 μl of lysate was saved for protein quantitation and 20–50 μg lysate was used for western blot. Equivalent lysate protein amounts (500 μg total cell protein) were added to a pre-determined amount of rhotekin-RBD beads at 4°C. Beads were incubated for 60 min with gentle rocking before collection by centrifugation at 15,000 rpm for 60s at 4°C. After being washed in washing buffer, beads were resuspended in 20 μl of 2× Laemmli sample buffer, then boiled for 2 min. The supernatant was resolved on 12% SDS-PAGE. Membranes were probed with anti-RhoA antibody (1 μg/ml; provided in the kit) and a species-specific horseradish peroxidase (HRP)-conjugated secondary antibody. Protein bands were imaged using an ECL system.
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3

Measuring Activation of Rho GTPases

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The level of active CDC42 (GTP-CDC42) and active Rac1 (GTP-Rac1) in GC cells was measured using Rac1/Cdc42 Activation Assay Kit (Millipore, MA) according to the manufacturer’s protocol. Briefly, GC cells were lysed by lysis buffer. PAK1-PBD agarose beads, which specifically bound to active CDC42 and Rac1, were added into the cell lysates. Agarose beads were then washed with lysis buffer three times. Active CDC42 and Rac1 was disassociated from PAK1-PBD agarose beads by reduced sample buffer and boiled for 5 min. The final samples were analyzed by western blot using anti-CDC42 antibody or anti-Rac1 antibody. Similarly, the level of active RhoA (GTP-RhoA) in GC cells was measured by RhoA Pull-down Activation Assay Biochem Kit (Cytoskeleton, CO) using Rhotekin-RBD bead according to the manufacturer’s protocol.
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4

RhoA Activation Assay and Apoptosis Analysis

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Chang liver and T-REx-HeLa were purchased from ATCC (#CCL-13), and Invitrogen (R714-07), respectively. G418 sulfate was purchased from AG Scientific, doxycycline from BD Biosciences, and anti-MYPT1, anti-pMYPT1, anti-RhoA antibody were purchased from Cell Signaling. RhoA Pull-down Activation Assay Biochem kit was obtained from Cytoskeleton, and Alexa Fluor 488 goat anti-mouse IgG antibody, blasticidin, pcDNA6/TR vector and TRIZOL reagent were purchased from Invitrogen. Rhodamine phalloidin was obtained from Life Technologies, pSuperior.neo vector from OligoEngine, and Mo-MuLV reverse transcriptase from Promega. In Situ Cell Death Detection Kit was purchased from Roche. Annexin V-FITC Apoptosis Detection Kit, anti-α-tubulin antibody, blebbistatin, cycloheximide, 4′,6-Diamidino-2-phenylindole dihydrochloride (DAPI), HRP-conjugated goat anti-rabbit IgG antibody, HRP-conjugated goat anti-mouse IgG antibody, human tumor necrosis factor-α (hTNF-α), phosphatase inhibitor cocktail II, III, propidium iodide, protease inhibitor mixture, RNase A and Y-27632 were purchased from Sigma. DNAs were synthesized from Cosmogenetech (Korea). The His-tagged Tat-C3 transferase exoenzyme (pHis-Tat-C3) expression vector was provided by Jae Bong Park and the recombinant C3 transferase was prepared as previously described [20 (link)].
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5

Detecting Active RhoA in Serum-Starved Cells

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Cells grown under normal conditions were treated in serum starvation conditions (1% fetal bovine serum [FBS]) for 6 hours, after which the samples were collected and preserved through snap-freezing in liquid nitrogen. After the protein quantity was made equivalent across all samples by measuring the protein concentration using a Bradford reagent through a NanoDrop spectrophotometer (immunoblotting; Thermo Fisher Scientific), Rhotekin-RBD beads and other reagents from the RhoA Pull-Down Activation Assay Biochem Kit (#BK036-S; Cytoskeleton, Inc., Denver, CO, USA) were added to the protein lysates and then centrifuged as described in the product protocol according to the manufacturer's instructions. WB was then performed on the proteins that remained bound to the beads, using a special Rho A primary antibody provided by the manufacturer.
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6

Measuring Activated RhoA in HEYA8 Cells

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Activated GTP-bound RhoA in HEYA8 with or without co-incubation with platelets for two hours under low-attachment conditions was measured using the RhoA pulldown activation assay biochem kit (Cytoskeleton, Inc., cat. no. BK036), per manufacturer’s recommendations using 250 µg protein lysates and 25 µg Rhotekin-RBD beads per reaction.
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7

Quantifying Active RhoA Levels

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Active GTP-RhoA was captured using the RhoA Pull-down Activation Assay Biochem Kit (bead pull-down format) (Cytoskeleton, Inc., Japan). Briefly, cell lysates were incubated with GST-rhotekin-RBD beads for 1 h at 4 °C. The protein/beads complexes were washed and the bound proteins were resuspended. GTP-RhoA and total RhoA were detected by western blotting with a RhoA-specific antibody.
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8

RhoA Activation Assay in Cell Lines

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HN12 cells and Cal27 cells were cultured to 50% confluency, and then serum starved overnight. To induce RhoA activation, cells were treated with 5 μM LPA, 1 μM Ang II, or 10 μM CP-55940 for 5 min. Active RhoA levels were measured using the RhoA Pull-Down Activation Assay Biochem Kit (bead pull-down format; Cytoskeleton) following the manufacturer instruction using a modified lysis buffer (50 mM Tris-HCl (pH 7.2), 500 mM NaCl, 10 mM MgCl2, 0.1% SDS, 1% NP-40). Briefly, after stimulation, samples were lysed and protein concentrations were quantified using DC Protein Assay (BioRad). Samples were adjusted to the same concentration with lysis buffer and 500 μg of each protein lysate was added to 15 μL GST-tagged Rhotekin-RBD bound to Sepharose beads. Samples were incubated while rocking at 4°C for 1.5 h. Beads were then washed, eluted in Laemmli sample buffer, and analyzed by western blot using a mouse monoclonal anti-RhoA antibody (Cytoskeleton).
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9

RhoA Activation Assessment in Fibroblasts

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WPMY-1 fibroblasts were grown to 80% confluency. Cells were starved in 1% FBS DMEM 24 hours prior to treatment with the indicated concentrations of luteolin or EGCG for 30 minutes prior to the addition of 5 ng/ml TGF-β for an additional 15 minutes. RhoA activation was assessed using the RhoA Pull-down Activation Assay Biochem Kit according to manufacturer instructions (Cytoskeleton, Inc.). Briefly, following treatment cells were washed with ice-cold PBS and scraped off the plates in cell lysis buffer on ice at 4°C. Lysates were centrifuged for 5 minutes at 5,000 g at 4°C. Cleared lysates (1 mg/ml) were incubated with 50 µg Rhotekin-RBD protein beads on a rotisserie rotator for 1 hour at 4°C. Bead pellets were washed twice with wash buffer before the addition of boiling laemmli. Protein concentration was assessed using Pierce 660 nm reagent (Thermo Scientific) and equal amounts of protein were analyzed by western blot.
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10

RhoA GTPase Activation Assay

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Active RhoA levels were measured using the RhoA Pull-down Activation Assay Biochem Kit (BK036-S, Cytoskeleton Inc.) using GST Rhotekin beads. The levels of the GTP-RhoA associated with GST-Rhotekin-RBD were quantified by western blot analysis. Briefly, A293 cells were plated in a 6-well plate at a density of 3.5 x 105 cells per well and transfected with 1 μg Gαi1, 100 ng c-myc-PRG and, 250 ng RhoA-HA per well using 1:3 DNA: Lipofectamine 2000 ratio. 20 hr after transfection, cells were cultured in serum-free media for 4 hr. Cells in each well were then lysed with 300 μL of RhoA lysis buffer with 1×PI (included with the kit), and lysates were equalized for total protein amount. Samples from two wells were pooled for each experimental group (total 600 μL, ~600 μg protein per experimental group). The lysates were incubated with 50 μg of GST-Rhotekin bound beads in an end-over-end rotator for 1 hr at 4 °C. Beads were washed twice with wash buffer (included with the kit), eluted in 40 μL 1× Laemmli sample buffer, and analyzed by western blot using an anti-HA (1:2000), anti-c-myc antibody (1:2000), and anti-Gαi1/2 antisera (1:3000). Band intensities were quantified using Image Studio Lite (version 5.2)
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