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Pbs phosphate buffered saline

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PBS (phosphate-buffered saline) is a common laboratory buffer solution used to maintain the pH and osmolarity of biological samples. It is a physiologically compatible buffer that helps preserve the integrity and functionality of cells, proteins, and other biomolecules. The core function of PBS is to provide a stable and standardized environment for various experimental procedures.

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12 protocols using pbs phosphate buffered saline

1

Curcumin Photodynamic Therapy for Cancer

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Curcumin (Biomol, Hamburg, Germany) was stored at −20 °C and diluted prior to use in cell culture medium to a final concentration of 0.2 µg/mL (0.54 µM). 4 µg/mL curcumin was used to provide high quality images for confocal microscopy and optimum fluorescence detection by FACS analysis. Cells were treated with curcumin for 1 h and then exposed to visible light for 5 min with 5500 lx (curcuminLight; 10 × 40 W lamps, distance 45 cm, emission spectrum: 400–550 nm) using a Waldmann UV 801AL system (Waldmann, Villingen-Schwenningen, Germany) [18 (link)]. To prevent bias effects by the phenol red containing RPMI 1640 based cell culture medium, tumor cells were transferred to phenol red free PBS (phosphate-buffered saline) (Sigma-Aldrich) during light exposure. Thereafter, PBS was replaced by RPMI 1640 and supplements. Control cell cultures received PBS for 5 min without light exposure. To evaluate the effects of low dosed curcumin and light alone, two respective additional controls were employed; tumor cells exposed to light but not to curcumin, and tumor cells exposed to curcumin but no light. Following light exposure (including all controls), tumor cells were allowed to recover in complete cell culture medium for 24 h before starting adhesion and migration experiments.
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2

Isolation of RTB Microbiota from Pine Trees

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We collected RTB gallery tissues from naturally infested P. tabuliformis trees at Tunlanchuan Forest Station (37° 48′ N, 111° 44′ E; average elevation 1400 m; P. tabuliformis 3278 ha) in Shanxi Province. Gallery samples (ca. 0.5 g in fresh weight) were first homogenized into fine pieces by sterile forceps and scissors and then macerated in 0.5 ml 10% PBS (phosphate-buffered saline) (Sigma) to obtain crude extracts containing microbial cells (gallery microbiota).
Second to third instar RTB larvae were randomly collected from beetle galleries of infested host pines at Tunlanchuan Forest Station. Beetles were surface-sterilized with bleach, ethanol, and distilled water [10:10:80 (vol:vol)], kept in a climate-controlled incubator (25 ± 1 °C, RH = 70%, darkness) and starved for 24 h before use.
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3

Efficient Milk DNA Extraction for Microbiome Analysis

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Milk samples were thawed by placing them at 4 °C the night prior to DNA extractions. The samples were homogenised by inverting the tubes and centrifuged at 4000× g for 30 min at 4 °C. The fatty/cream layer that accumulated at the top was discarded using sterile cotton swabs and the supernatant was discarded. DNA was extracted from the pellet according to the manufacturer’s instructions using the PowerFood microbial DNA Isolation Kit (MoBIO Laboratories Inc., Carlsbad, CA, USA) with modifications as follows: Briefly, the cell pellets were washed with PBS (phosphate-buffered saline) (Sigma Aldrich, St. Louis, MO, USA) and centrifuged at 13,000× g for one minute at 20 °C to discard the supernatants. This process was repeated until the supernatant was no longer cloudy. The pellet was then re-suspended in PBS and treated with 90 µL of 50 mg/mL lysozyme (Sigma Aldrich, lysozyme activity: ≥40,000 units/mg protein) and 50 µL of 5 KU/mL mutanolysin (Sigma Aldrich) followed by 15 min incubation at 55 °C with vortexing at intervals of 5 min. Further, samples were treated with Proteinase k (Qiagen, UK, 28 µL of 20 mg/mL, >600 mAU/mL), incubated at 55 °C for 15 min and then treated according to the manufacturer’s instructions using the PowerFood microbial DNA Isolation Kit protocol. The extracted DNA was stored at −30 °C until further use.
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4

Doxorubicin-Dendrimer Nanocarrier for Breast Cancer

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All chemical reagents were purchased from commercial suppliers. Solvents for the synthesis were purchased from Sigma-Aldrich. All cell culture reagents were purchased from Gibco® (Germany). Flasks and multiwell plates for in vitro studies were obtained from Nunc (Germany). Amine terminated PAMAM G4 dendrimer, doxorubicin hydrochloride, PBS (phosphate buffered saline), FBS (fetal bovine serum) and MTT (3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide) were purchased from Sigma-Aldrich. Trypan blue was purchased from Molecular Probes (USA). Caelyx® (PEGylated liposomal doxorubicin) was purchased from Janssen-Cilag International (USA). Rubusoside and kaempferol were purchased from Sigma-Aldrich. Human breast adenocarcinoma cell line MCF-7 (ATCC no. HTB-22) was purchased from ATCC (USA). AntiGLUT1-FITC antibody (FAB1418F) was purchased from R&D.
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5

Apoptosis Analysis of HCT 116 Cells

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The HCT 116 cells were seeded in 6-well plate (Nunc, ThermoFisher, Waltham, MA, USA) at a density of 5 × 104 cells/well and allowed to attach. After 24 h the medium was replaced with tested compounds. The cells were then incubated for 24 h at 37 °C. Next, both floating and adherent cells were harvested and centrifuged at 600× g. The cells were washed with PBS (phosphate buffered saline) (Sigma-Aldrich, Taufkirchen, Germany) and we followed instructions from the manufacturer of the Annexin V-FITC Apoptosis Detection Kit (Biotool, Jupiter, FL, USA). Fluorescence was measured using a Becton Dickinson FACS Aria III sorter (BD Company, San Diego, CA, USA). Experiments were repeated at least twice. Data were analyzed using FCE Express 7 Software (DeNovo Software, Pasadena, CA, USA).
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6

Enzymatic Assay for HRV 3C Protease

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Salts Na2HPO4.2H2O, NaH2PO4.H2O, NaCl, and NaClO4.H2O and buffers citrate phosphate, MOPS (3-(N-morpholino)propanesulfonic acid), HEPES, glycine and PBS (phosphate buffered-saline) were purchased from Sigma Aldrich. NaBr was obtained from Scheme 1. General scheme of HRV 3C protease. The catalytic mechanism of the cysteine protease is analogous to that of the serine protease in which the nucleofilic serine is replaced by the cysteine [29] (link).
Penta, Na2SO4 from Merck. Substrate for the enzyme assay, pentapeptide Glu-Ala-Leu-Phe-Gln conjugated to the chromogenic p-nitroanilide (pNA) through the amide bond (EALFQ-pNA), has been obtained from ThermoFischer with purity higher than 95%.
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7

Scleral Cell Characterization Under Dexamethasone

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In general, scleral cells were seeded and grown to 70% confluence in 4-well chamber slides (ThermoFisher) under 3 treatment groups and treated daily for 7 days: DEX (100 nM dexamethasone dissolved in DMSO [Millipore Sigma, Burlington, MA]), DMSO (0.1% [Millipore Sigma]), and MED (media). After 7 days, cells were washed with 1X phosphate buffered saline (PBS; Millipore Sigma), fixed with 4% paraformaldehyde for 25 minutes at room temperature (RT), washed 3 times with PBS, and blocked/permeablized with 0.25% Triton X-100 in 5% bovine serum albumin (BSA; Rockland, Limerick, PA) for 30 minutes at RT. Fixed cells were incubated in α-smooth muscle actin primary antibody (α-SMA; ab5694; Abcam, Cambridge, MA; 1:100) with 1% BSA overnight at 4°C. Cells were then washed twice with PBS, incubated in Texas Red-X secondary antibody (T-6391; ThermoFisher) with 0.2% BSA for 1 hour at RT, stained/mounted with DAPI (Vector Laboratories, Burlingame, CA), and imaged under a BZ-X700 digital imaging microscope (Keyence, Itasca, IL).
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8

Hydrogel-based Biomaterial Characterization

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4-arm PEG-Acrylate (4-arm PEG-Ac; 10 kDa) and PEG-dithiol (PEG-diSH; 3.4 kDa) were acquired from Laysan Bio Inc. (Arab, Al). Laponite XLG particles (disc-shaped, ~30 nm × 1 nm) abbreviated here as NS for nanosilicates were purchased from BYK Additives (Wesel, Germany). Fluorescent dye removal columns and Atto 655 NHS ester were obtained from Thermo Scientific (Waltham, MA). CoverWell perfusion chamber gaskets and silicone spacers were purchased from Grace Bio-Labs (Bend, OR). Bradford protein assay reagent, bovine serum albumin (BSA), ribonuclease A (RNase), lysozyme (Lys), sodium pyrophosphate (SPP), phosphate-buffered saline (PBS), and triethanolamine (TEA) were procured from Millipore Sigma (Saint Louis, MO).
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9

Etoposide Cytotoxicity Assay Protocol

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Etoposide (Fisher Scientific) dilutions were initially prepared in DMSO (Thermo Fisher Scientific, Waltham, MA, USA) then diluted further in phenol red-free, serum-free DMEM/F12 (Fisher Scientific) media for a final DMSO concentration of 1% (v/v). When estimating the effects of Etoposide cells were cultured overnight in a phenol red-free medium without serum for 24 h. Cells were treated with Etoposide (0.01–100 µM) diluted into 50 µL of serum-free DMEM/F12 media and incubated for 1.5 h. Control wells were treated with 1% (v/v) DMSO/phenol red-free, serum-free DMEM/F12 media solution. The Etoposide treatments were carefully aspirated from the wells, and the cells were washed three times for 5 min each with 1 × phosphate-buffered saline (PBS) (Millipore Sigma, Burlington, MA, USA).
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10

Alcohol Biosensor for Skin Monitoring

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To convert alcohol that emanates from the skin into an electrical signal that can be digitized, we used the enzyme Alcohol Oxidase (AOD) (Pichia pastoris; Gwent) and a screen-printed Prussian Blue (PB) electrochemical sensor (DropSens) as the transducer. These key elements were contained within a custom-designed and manufactured disposable cartridge biosensor (Figure 1). Importantly, the disposable cartridge had a diffusion-limiting membrane (15 μm Polyethylene (PE) film; Goodfellow) that interfaced with the skin and had a surface area of 49 mm2, affixed to the cartridge by a closed-cell foam tape (TESA 75720) laser cut to shape. The cartridge reservoir (defined by a 1.59 mm thick die-cut low-density polyethylene piece) contained 1.3 units of AOD [25 (link)] in 25 μL of hydrogel consisting of 1× Phosphate-Buffered Saline (PBS) and agarose (MilliporeSigma) at pH 7.4. A 53 μL air-gap existed between the membrane and the hydrogel; ethanol traveled through the membrane, through the air-gap, and reacted with AOD to produce acetaldehyde with simultaneous formation of hydrogen peroxide. Hydrogen peroxide diffused to and was sensed by the electrode: a custom screen-printed PB [26 (link),27 (link),28 (link),29 (link)] working electrode (surface area 21 mm2 ) and a Ag/AgCl quasi-reference electrode (surface area 6.0 mm2 ).
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