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2 4 amidinophenyl 6 indolecarbamidine dihydrochloride dapi

Manufactured by Solarbio
Sourced in China

2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) is a fluorescent dye used for staining and visualizing nucleic acids, particularly DNA, in biological samples. It binds selectively to adenine-thymine (A-T) base pairs in DNA, emitting a blue fluorescence when excited by ultraviolet (UV) or violet light. DAPI is commonly used in various applications, such as cell biology, molecular biology, and microscopy, to stain and identify cell nuclei.

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7 protocols using 2 4 amidinophenyl 6 indolecarbamidine dihydrochloride dapi

1

Quantifying PEDV Infection in Vero Cells

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Vero cells were fixed with 4% paraformaldehyde in phosphate-buffered saline (PBS) (Solarbio) followed by incubating with blocking buffer (0.2% skim milk, 2% FBS, 0.1 M glycine, 1% bovine albumin, and 0.01% triton-X 100 in PBS) for 30 min after incubating with PEDV N protein monoclonal antibody (1:500) for 1 h, followed by the incubation with fluorescence-conjugated goat anti-mouse IgG (1:1000) (Zhongshan, Beijing, China) and 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) (Solarbio) for 30 min. Fluorescence signals were captured with a Ti-S fluorescence microscope (Nikon, Tokyo, Japan). The percentage of viral infected cells was calculated by counting the cells with PEDV N-positive signal and dividing it by the number of DAPI-positive [10 (link)]. For each condition, we chose at least three views with more than 300 DAPI-positive cells and triplicated them to get the standard deviation.
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2

Synthesis of mPEG-DOX Conjugate

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The α-methoxy-ω-hydroxypoly(ethylene oxide) (mPEG, number average molecular weight (Mn) = 1900), DOX·HCl, CPADB, 4-(dimethylamino)pyridine, and dicyclohexylcarbodiimide were purchased from Aladdin and used as received. DIPEMA (97%) and GlyMA were purchased from Aladdin and purified by passing the compounds through a column of Al2O3 to remove inhibitors. KPS (United Initiators (Shanghai) Co., Ltd.), SBS (Damao Chemical Reagent Factory), and 2-(4-amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI, Solarbio) were purchased and used without further purification. Other chemicals were of analytical grade and used as received.
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3

Photodynamic Effect Evaluation Protocol

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The Cell Counting Kit-8 (CCK-8) assay kit was purchased from TargetMol (MA, USA), 5-ethynyl-2′-deoxyuridine (EdU) assay kit was from Beyotime (Shanghai, China), N-acetylcysteine (NAC) was from Selleck (Shanghai, China), and 2′,7′-dichlorodihydrofluorescein diacetate (DCFH-DA) was from KeyGen BioTECH (Nanjing, China). The Annexin V-FITC/PI Apoptosis detection kit was purchased from BD Bioscience (Franklin Lakes, NJ, USA), chloroquine (CQ) phosphate salt was from Sigma-Aldrich (Germany), and 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) was from Solarbio (Beijing, China). We obtained 3-methyladenine (3-MA), LY294002, and 740 Y-P from MedChemExpress (Monmouth Junction, NJ, USA). All the other reagents were analytical grade commercial products.
Semiconductor lasers (excitation wavelength: 450 nm and 630 nm, respectively; manufacturer: Blueray Medical Ltd., Xi’an, China) were carried out as the source for the evocation of the photodynamic effect.
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4

Immunofluorescent Detection of Cg-LC3 in Hemocytes

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The hemocytes were collected and resuspended in an L15 medium. The suspension was deposited on clean slides (a drop on each) in the wet chamber. After the monolayer was sedimented on the side, the hemocytes were fixed with 4% paraformaldehyde (PFA) for 10 min. After being washed with L15 medium for 5 min, the hemocytes were blocked by incubating in 3% BSA at 37°C for 30 min. The supernatant was then removed, and the dishes were incubated with 500 µl of anti-LC3 (diluted 1:200 in 3% BSA) at 4°C for 2 h. After washing three times with L15 medium, the hemocytes were incubated with Alexa Fluor 488-labeled goat anti-Rabbit secondary antibody (diluted 1:200 in 3% BSA) at 37°C for 1 h. After washing another three times with an L15 medium, the hemocytes were incubated with 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) (Solarbio Life Sciences, China, diluted 1:1,000 in 3% BSA) to stain the nucleus. The slides were mounted on buffered glycerin (50%) and observed using a fluorescence microscope (ZEISS, Germany) after the final three times of washing with the L15 medium. ImageJ was used to calculate the fluorescence signals of CgLC3 in the hemocytes.
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5

Immunohistochemical Characterization of Cell Types

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Cell type and distribution were determined by H&E staining and immunohistochemical staining. The specific experimental steps refer to the previous literature of our team (28 (link)). Primary and secondary antibodies are listed in Table S2. For antigen retrieval, the paraffin tissue sections were immersed in citrate buffer (pH 6.0), and placed in a pressure cooker until steam was generated for 3 min. To block non-specific peroxidase, a 3% hydrogen peroxide and methanol solution was applied to tissue sections for 10 min, following incubation in goat serum (Solarbio Life Science, Beijing, China, S9070) for 30 min. Tissue sections were then incubated with diluted primary antibody (Table S2) at 4°C overnight and washed twice with PBS. Fluorescent dye-labeled or HRP-labeled secondary antibodies were applied to the tissue sections for 30 min, followed by three PBS washes. The nuclei were counterstained with 2-(4-amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) (Solarbio Life Science, Beijing, China, C0065) or DAB (Dako, Glostrup, Denmark, 20052898) and hematoxylin (Scientific Phygene, Fuzhou, China, PH1464). Images of all sections were captured using a Leica DM2500 microscope.
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6

Immunofluorescent Analysis of M1/M2 Macrophage Markers

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RAW 264.7 cells were inoculated to 6 well cell culture plates, and the next day the medium was replaced with material leach liquors containing LPS (1 µg mL−1) for 24 h. The cells were fixed with 4% paraformaldehyde for 15 min and then permeabilized by 0.5% Triton X‐100 for 15 min. After three washes with PBS, cells were blocked using 10% normal goat serum. Subsequently, cells were incubated with anti‐CD206 (host: rabbit) and anti‐iNOS (host: mouse) primary antibodies (1:500; Abcam, Cambridge, UK) at 4 °C overnight, washed with PBS and incubated with Alexa Fluor 594‐conjugated goat anti‐rabbit IgG secondary antibody and Alexa Fluor 488‐conjugated goat anti‐mouse IgG secondary antibody (1:500; Proteintech, Wuhan, China) in the dark for 1 h at 37 °C. Nuclei were redyed using 2‐(4‐Amidinophenyl)−6‐indolecarba midine dihydrochloride (DAPI; Solarbio). Images were observed under a fluorescence microscope (Leica DMi8, Wetzlar, Germany) in the darkroom.
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7

Cytotoxicity Assessment of Pyrrole Compounds

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Pyrrole (99%), methylene blue (MB), and copper chloride (CuCl2) were purchased from Aladdin. Hetastarch (HES) and doxorubicin hydrochloride (DOX) were obtained from Shanghai Yuanye Bio-Technology Co., Ltd. 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (DAPI) was purchased from Solarbio. 2′,7′-Dichlorofluorescin diacetateb (DCFH-DA), 3-(4,5-dimethylthiazol-2-yl)-2,5-dipheny-ltetrazolium bromide (MTT), and JC-1 probe were obtained from Beyotime Biotechnology. Dulbecco's modified eagle's medium (DMEM), phosphate buffer (PBS), fetal bovine serum, and trypsin–EDTA were obtained from Gibco-BRL. All chemicals and reagents were of the highest quality commercially available and used without further purification.
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