The largest database of trusted experimental protocols

Anti vimentin antibody

Manufactured by Merck Group
Sourced in United States

The Anti-vimentin antibody is a laboratory reagent used in scientific research. It is a protein that binds specifically to the vimentin protein, which is found in the cytoskeleton of various cell types. The antibody can be used to detect and quantify the presence of vimentin in cell samples, which is important for studies on cell structure and function.

Automatically generated - may contain errors

8 protocols using anti vimentin antibody

1

Isolation of Kidney Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Three kidney cancer tissues and corresponding histologically proven non-malignant tissues adjacent to the tumor were obtained after surgery. All the tumors were of Grade 3. Portions of the tissue were immediately sent to the histopathology laboratory for histological diagnosis. Other portions were placed into a transport medium and disaggregated immediately as described previously by Valente et al. [18 (link)]. The cultured cells exhibited the characteristic features of epithelial cells (i.e., positive immunocytochemical staining for cytokeratin 19). Contamination from fibroblasts was quantified using an anti-vimentin antibody (Sigma, St. Louis, MO, USA). Their expression was lower than 10%. In all experiments, to obtain enough cells to perform a basic growth assay and ERK1/2 activation, and to avoid variations in the characteristic features of the cells, normal and corresponding tumor kidney epithelial cells were exclusively used in the primary culture at passage 2.
+ Open protocol
+ Expand
2

Western Blot Analysis of EMT Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cytosolic and nuclear extracts were obtained using an Active Motif nuclear extraction kit (Active Motif) according to the manufacturer’s instructions.
Cytosolic and nuclear extracts were separated by sodium dodecyl sulfate–​polyacrylamide gel electrophoresis (SDS-PAGE), transferred to polyvinylidene difluoride (PVDF) membrane sheets (Immobilon-P, Millipore) and probed with the required antibody diluted in 0.1% PBS-Tween with 5% nonfat dry milk. After 1 hr of incubation, the membranes were washed with 0.1% PBS-Tween and then were incubated for 1 hr with peroxidase-conjugated sheep anti-mouse or sheep anti-rabbit IgG antibody (Amersham International) diluted 1:3,000 in 0.1% PBS-Tween with 5% nonfat dry milk. The membranes were washed again with 0.1% PBS-Tween, and proteins were detected by enhanced chemiluminescence (Perkin Elmer).
Anti-E-cadherin, β-catenin, tubulin, SNAIL-1, and TATA-binding protein (TBP) antibodies were all provided by Santa Cruz Biotechnology, Inc. Tubulin and TBP were used as loading controls for the cytosol and the nucleus, respectively. The anti-vimentin antibody was provided by Sigma Chemical Co. The anti-α-SMA antibody was from GeneTex. The anti-Smad2 and p-Smad2 antibodies were from Abcam.
+ Open protocol
+ Expand
3

Lentiviral Vector Production and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Plasmids for lentiviral vector construction were obtained from Addgene (Cambridge, MA). PCR primers were synthesized by Integrated DNA Technologies (Coralville, Iowa). The qPCR lentivirus titration kit was purchased from Applied Biological Material (Atlanta, GA). The PBS, TritonTMX-100, voltage-sensitive fluorescent dye RH-237, and Alexa Fluor 633 secondary antibody were purchased from Life Technologies (Carlsbad, CA). The anti-vimentin antibody, the anti-sarcomeric-α-actinin antibody, and all other reagents were from Sigma-Aldrich (St. Louis, MO).
Data were analyzed using OriginLab software. Comparisons between groups were performed using unpaired 2-tailed Student’s t-test (Figs 1, S3 and S7 and Table 1) or One-Way or Two-Way ANOVA test (Figs 2, S2 and S4). Data were considered significantly different at p < 0.05. Results are presented as bar (mean ± SEM) or box chart.
+ Open protocol
+ Expand
4

Identifying Primary Atrial Mechanocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Identification of primary atrial mechanocytes was performed by vimentin immunostaining. First, mechanocytes were washed 2 to 3 times with PBS, fixed with 4% polyformaldehyde for 20 minutes, rinsed with PBS three times, treated with 0.5% Triton-100 X at room temperature for 20 min, and rinsed with PBS three times for 2 min each time. Cells were blocked with 1% bovine serum albumin overnight and then they were incubated with the antibody (anti-Vimentin antibody; Sigma, USA) at a 1:100 dilution at 4°C overnight. They were then rinsed with PBS three times for 2 min each time, and the next antibody was added at a 1:100 dilution (sheep anti-rabbit labelled with fluorescent dye Alexa Flour 488 and the antirat IgG antibody; Sigma). The cells were incubated with the fluorescent antibodies for 30 min at 37°C, and PBS was used to rinse the cells three times, 2 min each time; then, the cells were incubated with 1:1,000 Drap5 for 15 min to dye the nuclei, and laser scanning confocal microscopy was used to observe and photograph the cells.
+ Open protocol
+ Expand
5

Quantifying SRC-1 and Vimentin Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Details of immunohistochemistry were described above. Briefly, the sections were incubated with anti-SRC-1 antibody (mouse monoclonal, 1:250, Thermo Scientific, Rockford, IL) at 4°C for 24 hr and then with anti-vimentin antibody (goat polyclonal, 1:1,000, Millipore). After 4 days in primary antibodies, sections were washed and placed in Alexa Fluor 488 anti-goat IgG and Alexa Fluor 568 anti-mouse IgG. Cell nuclei were visualized using DAPI. The number of SRC-1+vimentin-ir or vimentin-ir cells was counted in the three sections containing 3V and LV and in the two sections containing the cerebral aqueduct or 4V. The total number of the cells in the brain sections was thus obtained.
+ Open protocol
+ Expand
6

Molecular Mechanisms of Hepatic Stellate Cell Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human hepatic stellate cell line (LX-2) and the human embryonic kidney cell line cells (HEK 293T) were obtained from American Type Culture Collection (ATCC). Dulbecco's modified Eagle's medium (DMEM) was purchased from Invitrogen Life Technologies, Inc. (Carlsbad, CA, USA). Fetal bovine serum (FBS) and Opti-MEM were obtained from GIBCO (Los Angeles, CA, USA). Anti-Akt, anti-phospho-Akt, anti-GAPDH antibodies, and LY 294002 (PI3K inhibitor) were obtained from Cell Signaling Technology Inc. (Danvers, MA, USA). Anti-FOG2 and anti-α-smooth muscle actin (SMA) antibodies were purchased from Abcam (New Territories, Hong Kong). Anti-vimentin antibody was obtained from Millipore (Schwalbach am Taunus, Germany). Lipofectamine 2000 and Trizol were obtained from Invitrogen. Cell Counting Kit-8 (CCK-8) was from Dojindo (Kumamoto, Japan). miExpress™ Precursor miRNA Expression (pEZX-MR03) clone was ordered from GeneCopoeia (Rockville, MD, USA). Universal-RT-microRNA-PCR kits were from EXIQON (Vedbaek, Denmark). SYBR Green qPCR superMix was from Transgen Biotech (Beijing, China).
+ Open protocol
+ Expand
7

Immunofluorescence Analysis of EMT Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were placed on coverslips and exposed to TGF-β1 (5 ng/mL) after transfection with miR-29b mimic, miR-29b inhibitor, or siHSP47. Subsequently, The cells were permeated with 0.2% Triton X-100 in 1% bovine serum albumin for 10 min, blocked by 5% bovine serum albumin for 1 h at room temperature, incubated overnight at 4 °C with monoclonal anti-HSP47, anti-E-cadherin, and anti-vimentin antibodies (Sigma-Aldrich), then fixed with 4% paraformaldehyde. Goat anti-mouse Alexa 488 (Invitrogen) and goat anti-rabbit Alexa 555 (Invitrogen) secondary antibodies were added to the cells for incubation. Finally, the nucleus was counterstained with 4′,6-diamidino-2-phenylindole (Invitrogen) and the stained cells were visualized using a confocal laser scanning microscope (LSM700, Zeiss, Oberkochen, Germany).
+ Open protocol
+ Expand
8

Isolation and Culture of Primary Mouse Cardiac Fibroblasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary cultures of mouse CFs were prepared as previously described 20 (link). Briefly, the ventricles from mice were cut into pieces of approximately 1-mm3 using ophthalmic scissors and digested with 0.125% trypsin (Invitrogen). Dispersed cells were incubated in a 25-cm2 culture bottle for 30 min in a 5% CO2 incubator. CFs attached to the bottom of the dishes were subsequently incubated in DMEM supplemented with 10% fetal calf serum for an additional 2 to 4 days. Confluent cells were treated with pancreatic enzymes (containing 0.25% trypsin and 0.02% EDTA) and subcultured. Confluent CFs grown in culture dishes from passages 2 to 4 were > 99% positive for vimentin, as assessed by labeling with anti-vimentin antibodies (Sigma). Serum-containing medium from the cultured cells was replaced with serum-free medium for 24 h to synchronize the cell cycle for subsequent experiments.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!