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4 protocols using anti p akt

1

Western Blot Analysis of Hedgehog and BDNF Signaling

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Proteins were extracted from the ipsilateral T4-5 spinal cord dorsal horn (SDH), and the supernatant protein concentrations were detected with the BCA protein assay kit (Abcam). The equal number of sample proteins was separated on sodium dodecyl sulphate–polyacrylamide gels. Subsequently, they were transferred onto the polyvinylidene fluoride membrane, which was blocked with 5% non-fat milk and then incubated with primary antibodies overnight at 4°C. The primary antibodies included anti-Shh (1:2000, GeneTex, San Antonio, USA), anti-Ptch1 (1:1000, Sigma, St. Louis, USA), anti-Smo (1:2000, Abcam), anti-Gli1 (1:2000, Abcam), anti-BDNF (1:1000, GeneTex), anti-p-TrkB (1:1000, GeneTex), anti-TrkB (1:2000, GeneTex), anti-p-PI3K (1:1000, GeneTex), anti-p-Akt (1:1000, GeneTex), anti-Histone H3 (1:2000, GeneTex), and anti-GAPDH (1:10,000, GeneTex). Finally, the membranes were rinsed and the proteins were detected with the enhanced chemiluminescence method.
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2

Western Blot Protein Analysis

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Cells were harvested and lysed with modified RIPA buffer (50 mM Tris-HCl [pH 7.4], 150 mM sodium chloride, 1 mM ethylenediamine tetra-acetic acid, 1% NP40, 0.25% sodium deoxycholate, 1 mM dithiothreitol, 1 mM phenylmethylsulfonyl fluoride, 1 μg/ml aprotinin, and 1 μg/ml leupeptin). Whole-cell lysates were subjected to SDS-PAGE, transferred to a PVDF membrane (Immobilon®-P), and probed with primary antibodies for the target proteins at 4°C overnight. The primary antibodies used included anti-p84 (#GTX70220, GeneTex), anti-p-Akt (#GTX121937, GeneTex), anti-p-ERK [24 (link)] Cell Signaling, anti-p-p38 (#9211, Cell Signaling), anti-p-JNK (#4668, Cell Signaling), and anti-CEBPD (#GTX115047, GeneTex). The specific proteins were detected by incubation with a peroxidase-conjugated secondary antibody at room temperature for 1.5 h. Proteins were visualized using an ECL kit (PerkinElmer).
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3

Spheroid Proteome Analysis of BJ Extract

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The spheroids were formed by plating 1 × 106 cells per well in serum-free media with supplementation of growth factors and treated with various concentrations of aqueous extractions of BJ (0, 5, 10, and 15 mg/mL) for 12 h. The harvested cell pellets were lysed and the protein concentrations determined using a Bio-Rad protein assay kit for (Hercules, CA, USA) before being resolved by electrophoresis and transferred to nitrocellulose membrane. The blots were blocked with 5% non-fat milk and incubated with 1:2000 dilutions of primary antibodies, including anti-pAkt (GTX128414); anti-PARP (GTX112864); anti-EGFR (GTX121919); anti-pEGFR (GTX61507), anti-ABCG2 (GTX100437), anti-Nanog (GTX100863), anti-CD133 (GTX100567), anti-Sox2 (GTX627405), and anti-ALDH1A1 (GTX123973), from GeneTex. Membranes were then incubated with 0.3 µg/mL of peroxidase-conjugate anti-mouse or anti-rabbit IgG (Thermo Fisher Scientific) and detected with enhanced chemiluminescence substrate (Thermo Fisher Scientific). The loading control was incubated with anti-GAPDH antibody (GTX100118, GeneTex). The signals were visualized with enhanced LAS-4000 (FUJIFILM) apparatus and the band intensities of images analyzed using ImageJ software.
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4

Quantitative Western Blot Analysis of Cell Signaling Proteins

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Total protein (50 μg) was separated by 10 or 15% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electroblotted onto polyvinylidene fluoride membranes. Specific primary antibodies including rabbit monoclonal anti-PTEN, mouse monoclonal anti-Beclin-1 (1:500; Abcam), anti-Bcl-2, anti-Bax, anti-PDCD4, anti-p-AKT, anti-LC3B (rabbit polyclonal; 1:500, GeneTex), anti-caspase-3 (mouse polyclonal, 1:1000; Cell Signaling Technology), and horseradish peroxidase-conjugated anti-mouse or anti-rabbit secondary antibodies (1:4000) were used for western blotting. Protein bands were visualized using a Super-Signal West Pico Kit (Thermo Scientific, Rockford, IL, USA) and ChemiDoc MP Imaging System with Image Lab™ Touch Software (Bio-Rad Laboratories, Inc, Hercules, CA, USA). An anti-GAPDH antibody (mouse monoclonal, 1:1000; Santa Cruz Biotechnology) was used as a standard for quantitative protein analysis.
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