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2 protocols using cd3 v450

1

Multiparametric Analysis of Lung Leukocytes

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TKO-BLT-L mice were bled at 8- and 12-weeks post-surgery. Blood leukocytes were purified using RBC Lysis buffer (BioLegend, San Diego, CA, USA). Lung organoids were collected and digested using 60 mg/mL collagenase D (Roche, Basil, Switzerland) and 10 U/mL DNAse I for 1 h before passage through 70 mm filters. Leukocytes were then isolated using a 40%/70% Percoll gradient. Cells were incubated with anti-human Fc blocker (Thermo Fisher Scientific, Waltham, MA, USA) before antibody staining. Anti-mouse specific CD45, was used to exclude mouse leukocytes. Antibodies used included: CD3 V450, CD4 APC, CD8 APC-eFluor 780, CD14 PC7, CD16 FITC, CD19 PerCP-Cy5.5, CD45 V500, Live/Dead-PE-Texas Red, CD123 PE (eBioscience, San Diego, CA, USA), CD33 PE (Miltenyi, Bergisch Gladbach, Germany), CD56-AF700, CD11c-APC, HLA-DR and Lin-1 (CD3, CD14, CD16, CD19, CD20, CD56)-FITC (Biolegend). Data were acquired on a BD CytoFlex (Beckman Coulter, Brea, CA, USA) and analyzed with FlowJo Version 10.6 (BD Biosciences, Franklin Lakes, NJ, USA).
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2

Purification and Extraction of Leukocyte Subtypes

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Fresh peripheral blood and bone marrow samples were processed via ammonium-chloride-potassium red cell lysis, washed, and prepared for fluorescence-activated cell sorting (FACS) for purification of promyelocytes (CD14−, CD15+, CD16low/−) (Elghetany et al., 2004 (link)), monocytes (CD14+), neutrophils (CD14−, CD15+, CD16+) (Elghetany et al., 2004 (link)), and CD34+ cells. The following antibodies were used for FACS: CD34-PE (PE-pool, Beckman Coulter, PN IM1459U), CD14-APC (BD, clone M5E2), CD15-FITC (BD, clone HI98), CD16-PE (BD, clone 3G8), CD33-APC (eBioscience, clone WM-53), CD3-V450 (eBioscience, clone OKT3), and CD19-PE (BD, clone HIB19). Purified cells were then immediately submitted for DNA or RNA extraction using Qiamp DNA mini and Zymo Micro RNA kits, respectively, and then used as input for the genomic analyses below.
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