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129 protocols using fenofibrate

1

Ethanol Drinking Experiments Protocol

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Drug or vehicle was administered prior to the drinking tests as described below. Drugs were administered either intraperitoneally (i.p.; 10mL/kg), subcutaneously (s.c.; 2mL/kg), or per os (p.o.; 5mL/kg; via FTP-20-30 20 gauge, 30 mm length plastic feeding tubes from Instech Laboratories, Inc., Plymouth Meeting, PA, USA). Table S1 specifies doses and routes of administration for each experiment.
Grain ethanol (200 proof, Decon Laboratories, Inc.) was used in all experiments. Drugs administered during ethanol drinking experiments were gabapentin (Sigma-Aldrich, Milwaukee, WI, USA), tesaglitazar (Tocris, Minneapolis, MN, USA), fenofibrate (Sigma-Aldrich, Milwaukee, WI, USA), caffeic acid phenethyl ester (CAPE; Tocris, Minneapolis, MN, USA), ibrutinib (Toronto Research Chemicals, Inc., Toronto, ON, Canda) and rolipram (Sigma-Aldrich, Milwaukee, WI, USA). The vehicle used for gabapentin and CAPE was saline (Baxter Healthcare Corporation, Deerfield, IL, USA), while for tesaglitazar, fenofibrate, and rolipram, the vehicle was saline and 1.5-2% Tween-80 (Sigma-Aldrich, Milwaukee, WI, USA). The vehicle for ibrutinib was saline, 1.75% Tween-80, and 5% DMSO in week 1, and 100% DMSO in week 2. Table S1 provides a list of drugs, doses, and mechanisms of action for each experiment.
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2

Pharmacological Modulation of Neuropathic Pain

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Minocycline (50–300 μg, i.t.), fluorocitrate (0.5–1.5 nmol, i.t.), propentofylline (25–75 μg, i.t.), TNP-ATP sodium salt (5.0 μg, i.t.), (2R)-amino-5-phosphonovaleric acid; (2R)-amino-5-phosphonopentanoate (APV; 0.5 μg, i.t.), and fenofibrate (200 μg, i.t.) were purchased from Sigma. The p38 inhibitor, 4-(4-fluorophenyl)-2-(4-methylsulfonylphenyl)-5-(4-pyridyl)-1H-imidazole (SB203580; 30 μg, i.t.) and Y1036 (5 μg, i.t.) were obtained from Calbiochem. Recombinant human TrkB-Fc (three i.t. injections of 0.5 μg, 24 h apart) was purchased from R&D Systems. pioglitazone potassium salt (300 μg, i.t.) was purchased from Cedarlane. GW 9662 (2 mg/kg, i.p.) was obtained from Tocris, and administered 90 min prior to pioglitazone. GW 6471 (10 mg/kg, i.p.) was obtained from Sigma, and administered immediately prior to fenofibrate. All drugs were dissolved in physiological saline or 10–20% dimethyl sulfoxide. Doses were determined in pilot experiments. In one experiment, Minocycline was injected systemically at a dose of 25 mg/kg, i.p.
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3

Effect of Fenofibrate on Cranial Irradiation

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Eighty 10–12-week-old young adult male Fischer 344 × Brown Norway (F344×BN) rats were obtained from Harlan Laboratories, Inc. (Indianapolis, IN) and housed in pairs on a 12:12 h light-dark schedule with free access to food and water. All animal handling and experiments were performed in strict accordance with the NIH Guide for Care and Use of Laboratory Animals as approved by the Wake Forest School of Medicine Institutional Animal Care and Use Committee. After an acclimation period of 2 weeks, rats were randomized to 4 experimental groups (n = 20 rats/group), Group 1: sham irradiated; Group 2: fWBI; Group 3: sham irradiated + 0.2% w/w of fenofibrate (Sigma-Aldrich, St. Louis, MO) in the diet; and Group 4: fWBI + 0.2% w/w of fenofibrate in the diet. Rats received fenofibrate beginning 3 days before the start of fWBI and continuously until the end of the experiment. All rats were weighed weekly to assess their overall health.
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4

Pharmacological Induction of Fatty Acid Oxidation

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During the pharmacological intervention, aimed at increasing fatty acid oxidation in muscle or liver, mice were intraperitoneally injected with the PPARδ agonist GW501516 (AdipoGen Life Sciences) or the PPARα agonist fenofibrate (Sigma-Aldrich). GW501516 was dissolved in 2.5% dimethyl sulfoxide (DMSO) and saline and injected with a final concentration of 5 mg/kg body weight (injection volume was 5 μl/g body weight). fenofibrate was dissolved in corn oil (Sigma-Aldrich), and a final concentration of 50 mg/kg body weight in a total volume of 50 μl was injected. Ctrl mice received vehicle injections of either 2.5% DMSO in saline or 50 μl of corn oil.
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5

Fenofibrate Ameliorates Renal Injury

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Systemic Atf6a À/À mice published previously 15 were routinely maintained on the C57BL/6 background. The presence of targeted genes was routinely determined by polymerase chain reaction analysis of tail DNA. 15 Animal experiments were conducted following standards and procedures approved by the Ethics Committee for Animal Care and Use of the University of Tokyo, Tokyo, Japan. All procedures were carried out in accordance with institutional guidelines for animal experimentation.
In the uIRI model, after flank incision, the left renal pedicle was dissected and clamped using microvascular clamps for 27 minutes at 37 C. After ischemia, the clamps were released for reperfusion. The sham mice underwent the same procedure without clamping of the renal pedicle. On day 14 post-uIRI, mice were killed and the kidneys were removed for histologic, RNA, and protein analyses. For fenofibrate intervention, mice were i.p. injected with 150 mg/kg/d fenofibrate (Sigma-Aldrich) from day 0 to day 13 after uIRI operation.
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6

In Vitro Dissolution and Permeation Study

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Acetonitrile (≥ 99.9%), methanol (99.9%), fenofibrate, warfarin, porcine pancreatin (8 x USP specifications), bovine serum albumin, dimethyl sulfoxide (DMSO, ≥ 99.9%) D-α-Tocopherol polyethylene glycol succinate (TPGS), hexadecane (anhydrous, 95%), Tris-maleate, 4-bromophenol boronic acid, olive oil, Kolliphor EL (macrogolglycerol ricinoleate), Kolliphor RH40 (macrogolglycerol hydroxystearate), Tween 85, and Carbitol (diethylene glycol monoethyl ether) were purchased from Merck (Darmstadt, Germany). Felodipine was kindly donated by Lundbeck Pharma (Valby, Denmark). Captex 355 and Capmul MCM EP (Abitec, Janesville, WI, USA) were kindly donated by Barentz (Odense, Denmark). Miglyol 812 N was obtained from IOI Oleo (Wittenberge, Germany). FaSSIF/FeSSIF/FaSSGF powder were bought from Biorelevant.com (Croydon, UK). Lucifer Yellow CH dilithium salt was obtained from Biotium (Fremont, CA, USA). Lecithin 20% soy PC extract was obtained from Avanti Polar Lipids (Alabaster, AL, USA). GIT-0 lipid solution and Acceptor Sink Buffer were purchased from Pion (Billerica, MA, USA). N-dodecane (≥ 99%) was obtained from Alfa Aesar (Lancashire, UK). Ethanol (99.5%, denatured with 0.4% isopropyl alcohol) was obtained from Solveco (Rosersberg, Sweden). All water used was of grade I from a Milli-Q lab water purification system (Merck).
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7

Evaluating Solubility of Diverse Pharmaceutical Compounds

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Sodium taurocholate, cholesterol, sodium chloride (NaCl), sodium oleate, ammonium formate, potassium hydroxide (KOH), hydrochloric acid (HCl), naproxen, phenytoin, piroxicam, fenofibrate, probucol, griseofulvin, carvedilol, tadalafil, and indomethacin were purchased from Merck Chemicals Ltd. Aprepitant and felodipine were provided through OrBiTo by Dr. R. Holm, Head of Preformulation, Lundbeck, Denmark. Zafirlukast was purchased from Stratech Scientific Ltd. Phosphatidylcholine from soybean (lecithin) was purchased from Lipoid company. Chloroform from Rathburn Chemical Company. FaSSIF-v1 media was purchased from Biorelevant.com Ltd. Sodium phosphate monobasic monohydrate (NaH2PO4·H2O) and formic acid from Fisher Scientific. All acetonitrile (ACN) and methanol (MeOH) solvents were HPLC gradient (VWR). All water was ultrapure Milli-Q.
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8

SARS-CoV-2 Infection and Drug Screening in NHBE Cells

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Approximately 5×105 NHBE or PPARα CRISPR-KO NHBE cells were infected with SARS-CoV-2. After 24 hr, the medium was collected and changed to bronchial epithelial growth media supplemented with 0.1% DMSO (vehicle control), 10 μM Cloperastine (Merck; C2040), 5 μM Empagliflozin (AG-CR1-3619), 1 mM Metformin (Merck; 317240), 20 μM Fenofibrate (Merck; F6020), 20 μM Rosiglitazone (Merck; R2408), 50 μM Bezafibrate (Merck; B7273), 2 μM Wy-14643 (Cayman Chemical; 70730), 50 μM Conjugated (9Z,11E)-Linoleic acid (Merck; 16413) in 50 μM Oleic Acid-Albumin (Merck; O3008), or 20 μM Fenofibrate and 4 μM Etomoxir (Cayman Chemical; 11969). Then, every 48 hr medium was collected and replenished. The medium was stored at –80 °C immediately after removal. Culture viability was assessed at the end of the experiment using Hoechst staining, compared with mock-infected cells.
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9

Quantification of Lipid-Lowering Drugs

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Acetone, acetonitrile, propylene glycol, methanol, water, and HPLC-grade acetic acid were purchased from Fisher Scientific (Waltham, MA, USA). Pravastatin-d3, pitavastatin-d5, rosuvastatin-d3, fluvastatin-d6, and 4-OH-atorvastatin-d5 were purchased from BOC Sciences (Shirley, NY, USA). Lovastatin, fenofibrate, fenofibric acid, atorvastatin, simvastatin, simvastatin acid (tenivastatin), rosuvastatin, clofibrate, clofibric acid, and gemfibrozil were purchased from Millipore Sigma (St. Louis, MO, USA). N-desmethyl rosuvastatin was purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Pravastatin, Lovastatin acid, 4-OH-atorvastatin, 2-OH-atorvastatin, pitavastatin, fluvastatin, simvastatin-d6, and atorvastatin-d5 were purchased from Cayman Chemicals (Ann Arbor, MI, USA). 2-OH-atorvastatin-d5 and N-desmethyl-rosuvastatin-d3 were purchased from TRC Canada (Toronto, ON, Canada). Clofibrate-d4, clofibric acid-d4, fenofibrate-d6, fenofibric acid-d6, and gemfibrozil-d6 were purchased from CDN Isotopes (Pointe-Claire, Quebec, QC, Canada).
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10

Primary Hepatocyte Isolation and PPARα Agonist Treatment

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Primary hepatocytes were isolated from mice using a modified two-step perfusion method (65 (link)) using liver perfusion media (Thermo Fisher Scientific, Cat# 17701038) and liver digest buffer (Thermo Fisher Scientific, Cat# 17703034). Cells were seeded on plates (precoated [1 h] rat tail collagen I; Thermo Fisher Scientific, Cat# A1048301) in Dulbecco’s Modified Eagle’s Medium plus 10% fetal bovine serum, 2 mM sodium pyruvate, 1 µM dexamethasone, and 100 nM insulin plus 2% penicillin/streptomycin. After attachment (2 h), the medium was removed and the hepatocytes were incubated (22 h) in maintenance medium (DMEM [4.5 g/L glucose] supplemented with 10% FBS, 0.2% bovine serum albumin, 2 mM sodium pyruvate, 2% penicillin/streptomycin, 0.1 µM dexamethasone, and 1 nM insulin). The hepatocytes were incubated (16 h) with the PPARα agonist (100 μM) fenofibrate (MilliporeSigma, Cat# 6020) or solvent control (dimethyl sulfoxide).
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