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43 protocols using human astrocyte

1

Establishing and Authenticating Glioma Stem Cells

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Previously established and authenticated GSCs—GSC20, GSC28, GSC262, GSC268, and GSC6-27 were obtained from Dr. Bhat’s Laboratory, MD Anderson Cancer Center, Houston, Texas. GSC33 was obtained from Dr. John Kuo’s laboratory, University of Wisconsin, Wisconsin. These GSC were grown in DMEM/F12 supplemented with B27 (Life Technologies, Carlsbad, CA), EGF (20 ng/ml) (Millipore, Sigma, St. Louis, MO), bFGF (20 ng/ml) (Millipore, Sigma), 1% penicillin/streptomycin (Life Technologies). Human astrocytes (#1800) were obtained from ScienCell Research Laboratories (Carlsbad, CA). Gal-1 and CA-IX antibodies were obtained from both Santa Cruz (Santa Cruz, CA) and Novus Biologicals (Centennial, CO). GAPDH antibodies were obtained from Santa Cruz and HIF-1α antibodies were purchased from Novus Biologicals. Antibodies, LDHA-A, LDHA-B, PDH, p38 MAPK, Caspase-9, BAD, and NF-κB were purchased from Cell Signaling Technology (Danvers, MA). Neural progenitor cells (NPC) (PT-2599) were obtained from Lonza (Basel, Switzerland) and Human astrocytes (#1800) were obtained from the Sciencell laboratories, Carlsbad, CA).
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2

Assessing Astrocyte Viability with CNTs

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Example 2

To confirm that CNTs could be safely used in the brain, Human Astrocytes (HA) isolated from the cerebral cortex were obtained from ScienCell Research Laboratories (Carlsbad, Calif. 92011) and cultured per ATCC protocols. The HA's were treated with both raw and chemically-functionalized metallic-type CNTs (CNT-M) of 90 (left bars), 95 (center bars), and 99 (right bars) percentage purity. Cell viability was measured after 72 hours via an alamar blue assay. Upon performing a two-tailed student's t-test (α=0.05), the HA viability testing determined that 90% pure raw metallic-type CNTs reduced HA viability relative to 99% pure metallic-type CNTs at 25 ng/mL. No statistically significant difference in HA viabilities was observed once the CNTs were functionalized.

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3

GBM Cell Line Culture Protocol

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The GBM cell lines, T98G and U251, were obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). Human astrocytes (HA) and growth medium were obtained from Scien Cell Research Laboratories (Carlsbad, CA, USA). DMEM medium (Cat.no. SH30022.01, Hyclone Laboratories, Inc. Logan, UT, USA) and 10% fetal bovine serum (Cat.no. 10099141C, Gibco, Carlsbad, CA, USA) were used for culturing the T98G and U251 cells. All cell lines were cultured in a humidified atmosphere at 37 °C in 5% CO2.
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4

Glioblastoma and Microvascular Cell Lines

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SVG P12 (human, non-cancerous foetal glial cell line), U87MG (human glioblastomas, grade IV cell line) and RAW 264.7 (macrophages) from the European Collection of Cell Cultures (ECACC, UK). BTNW911, a short-term culture derived from primary cells obtained from a 60-year-old male grade IV glioblastoma, with written ethical consent from the Brain Tumour North West (BTNW) tissue bank (Supplementary data). Human microvascular endothelial cells (HMBEC), human brain vascular pericytes (HBVP), and human astrocytes (HA) were purchased from (Sciencell, Buckingham, UK). Cells were incubated in a humidified incubator under 5% CO2 at 37°C for culturing.
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5

Culturing Human Glioblastoma and Astrocyte Cell Lines

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The human glioblastoma cell lines (LN229, U87, A172, U118, and U251) were purchased from the American Type Culture Collection (ATCC, Manassas, USA). All of these cells were cultured in DMEM/F12 medium (Invitrogen, Waltham, USA) supplemented with 2 nM L-Glutamine, 10% fetal bovine serum (Gibco, Waltham, USA), 100 U/mL penicillin and 0.1 mg/mL streptomycin. 293FT cell line was purchased from Thermo Fisher Scientific (New York, USA), was cultured in DMEM(Invitrogen, Waltham, USA) supplemented with 10% fetal bovine serum, 1% P/S, 0.1 nM Non-Essential Amino Acids, 0.5 mg/mL G418, 4mL L-Glutamine, and 1 mM MEM sodium pyruvate. Human astrocytes (HA) and growth medium were from ScienCell Research Laboratories (Carlsbad, CA). All of these cells were maintained in 5% CO2 at 37 °C.
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6

Propagation and Culture of Human Astrocytes and Brain Endothelial Cells

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All cell lines were propagated in Nunclon™ Delta surface treated T175 flasks (ThermoFisher Scientific, USA) and stored in a standard tissue culture incubator set to 37°C, 95% humidity, and 5% CO2. Human astrocytes purchased from ScienCell Research Laboratories (USA) were cultured in Astrocyte Medium (ScienCell) containing 98% basal medium, 2% fetal bovine serum (FBS), 1% astrocyte growth supplement (AGS), and 1% penicillin/streptomycin solution. Human Brain Microvascular Endothelial Cells (HBMECs) were purchased from Cell Systems (USA) and cultured in complete classic medium with 10% serum (Cell Systems). All HMBECs were maintained in T175 flasks that were pre-treated with attachment factor (Cell Systems), as instructed by the supplier. Human astrocytes and HBMECs were used for experiments at passage numbers 4-10 and 4-7, respectively.
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7

Modeling Neuroinflammation and Mitochondrial Stress

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Primary human CNS cells or cell lines: human neurons (ScienCell,
Carlsbad, CA), human astrocytes (ScienCell), human brain endothelial cell line
(HCMEC/D3; provided by Pierre-Olivier Couraud (Weksler et al., 2005 (link))) and human microglia cell line (CHME5;
provided by Nazira El-Hage, Florida International University, Miami, FL) were
plated (105 cells/ml) according to
manufacturer’s/provider’s instructions. These cells were treated
with respective culture medium (Control) or inflammatory stimuli (supernatant
from LPS- and CD3/CD28 beads-stimulated PBMCs, 50% volume/volume) or
mitochondrial-stress stimulus (rotenone, 100 nM). Cell-culture supernatants were
collected at 0 and 24 hours after respective treatments and stored at
−80°C until further use. Oligodendrocytes were differentiated from
human pluripotent stem cells as described (Douvaras and Fossati, 2015 (link)); differentiated cultures had 70% of
O4+oligodendrocytes.
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8

Establishing Glioblastoma Cell Heterogeneity

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Four GBM cell lines were employed in several combinations in order to simulate cell population heterogeneity as one might encounter in GBM tumors. GBM cell lines U-373 MG (ATCC® HTB-16TM) U-87 MG (ATCC® HTB-14TM), U-87 EGFRvIII cell line (gifted by Dr. Webster Cavenee from Ludwig Cancer Research Institute, San Diego) and A172 (ATCC® CRL-1620TM) (obtained from ATCC, Manassas, VA) were employed. All the cancer cell lines were cultured in Dulbecco’s Modified Eagle Medium (DMEM) - high glucose with 10% fetal bovine serum (FBS), 1% L-glutamine, and 1% penicillin/streptomycin in a tissue culture incubator at 37°C with 5% CO2. In addition, human astrocytes (Sciencell Research Laboratories, Inc., Carlsbad, CA) were cultured in Astrocyte Medium containing 2% FBS, 1% astrocyte growth supplement, and 1% penicillin/streptomycin at 37°C with 5% CO2. Cells were recovered from tissue culture plastic for subsequent studies using Trypsin/EDTA (Thermo Fisher, Waltham, MA).
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9

Cell Lines and Culture Conditions

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Human cervical carcinoma cell (HeLa, catalog no. CRM-CCL-2TM) and mouse mononuclear macrophages (J774A.1, catalog no. TIB-67TM) were obtained from the American Type Culture Collection (ATCC). The human brain endothelial cell (hCMEC/D3, catalog no. 337728) was purchased from BeNa Culture Collection. The luciferase-transfected glioblastoma cell lines (U251-luc, catalog no. CBP30207L and GL261-luc, catalog no. iCell-0059a) were maintained in our laboratory (Shenzhen Second People’s Hospital, Shenzhen, China). Human astrocytes (catalog no. 1800) and brain vascular pericytes (catalog no. 1200) were purchased from Sciencell. The cells have been confirmed without mycoplasma contamination by mycoplasma detection kit (Beijing Solarbio Science & Technology Co., Ltd., CA1080). All types of cells were cultured in DMEM and supplemented with 10% FBS and 1% (v/v) penicillin-streptomycin. The normoxic cells were incubated in a humidified atmosphere with 5% CO2 and the hypoxia cells were maintained in an incubator with 1% O2, 5% CO2, and 94% N2. Red blood cells (RBC) were obtained from the peripheral blood of mice.
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10

Culturing Glioblastoma Cell Lines

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The GBM cell lines U87, A172, and H4 were obtained from American Type Culture Collection (ATCC). Cell lines SF295, SF268, SF539, SNB75, SNB19, and U251 were provided by National Cancer Institute Division of Cancer Treatment and Diagnosis (NCI, DCTD). Cell lines were cultured and maintained in Dulbecco’s Modified Eagle’s medium (DMEM, Corning Inc., Corning, NY, USA) supplemented with 10% heat-inactivated fetal bovine serum (Hyclone FBS, Thermo Fisher Scientific, Waltham, MA, USA), 1% Penicillin-Streptomycin (Thermo Fisher Scientific), and 0.1% Plasmocin Prophylactic (InvivoGen, San Diego, CA, USA). All cells were grown at 37 °C in a humidified incubator with 5% CO2. Human astrocytes were purchased from ScienCell Research Laboratories (Carlsbad, CA, USA) and cultivated in accordance with the manufacturer’s protocol, using Astrocyte Medium (ScienCell) on poly-L-lysine-coated cell culture flasks and dishes. Cells were used for only two subcultures to prevent the analysis of senescent cells.
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