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7 protocols using gtx100664

1

Immunohistochemical Profiling of Intestinal Stem Cells

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Paraffin sections were incubated overnight with primary antibodies in 1% horse serum albumin (PK-6200, Vector) at 4°C. The next day, the samples were washed with PBS and incubated with secondary antibodies at 25°C for 1 h. After washing with PBS, the sections were developed using ImmPACT® NovaRED® Substrate, Peroxidase (HRP) (SK-4805, Vector) for color reaction, and then observed under a microscope. The number of positive cells in 30 complete crypts was counted and expressed as the mean ± SD. Three mice were used in each group. The antibodies used were anti-BrdU (5292, CST), anti-Ki67 (9129, CST), anti-Cyclin D1 (2978, CST), anti-Lgr5/GPR49 (MAB8240, R&D Systems), anti-Sox9 (82630, CST), anti-Lysozyme (ab108508, Abcam), anti-Chromogranin A (GTX113165, GeneTex), and anti-Muc2 (GTX100664, GeneTex).
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2

Immunofluorescence Staining of MUC2 in Cells

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The cells were fixed with 4% paraformaldehyde and permeabilized by 0.1% Triton X-100 for 10 min. After being blocked with 10% normal donkey serum, the cells were incubated with a primary antibody against MUC2 (1:1,000, GTX100664, Genetex, Irvine, CA, USA) at 4 °C overnight. Goat anti-rabbit IgG (H + L), DyLight 488 (1:1,000, 35552, Thermo Scientific) was used as a secondary antibody, and DAPI (1:10,000) was applied to counterstain the nuclei for 10 min at room temperature. Samples were washed with PBS three times for 5 min, and the coverslips were placed onto slides and mounted using VECTASHIELD® (Vector Laboratories, Burlingame, CA, USA). Images were obtained using a Nikon C1 plus confocal laser scanning microscope (Nikon, Tokyo, Japan).
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3

Quantitative Analysis of MUC2 Expression

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The cells were fixed with 4% paraformaldehyde at 4 °C overnight. A permeabilization step with 0.1% Triton X-100 was performed for 10 min followed by blocking with 10% normal donkey serum (GTX73205, Genetex, Irvine, CA, USA). The cells were incubated with a primary antibody against MUC2 (1:1000 dilution; GTX100664, Genetex) at 4 °C overnight. Goat anti-rabbit immunoglobulin G (IgG) (H + L), DyLight 488 (1:1000 dilution; 35552, Thermo Scientific, Wilmington, DE, USA), was used as the secondary antibody for green fluorescence, and DAPI (1:10,000 dilution) was used to counterstain the nuclei for 5 min at room temperature. After washing samples with phosphate-buffered saline (PBS) three times for 5 min each, the slides were mounted using VECTASHIELD® (Vector Laboratories, Burlingame, CA, USA). Images were captured using a Nikon C1 plus confocal laser scanning microscope (Nikon, Tokyo, Japan), and the intensity of green fluorescence indicating MUC2 protein was quantified by Olympus fluoview FV1000 ver.2.1b (Olympus, Tokyo, Japan) followed by normalizing the detected area and expressed as (%) compared to the negative control (100%).
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4

Immunohistochemical Characterization of MUC2 and NLRP6

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MUC2 immunohistochemistry was performed by Leica BOND-III using sections (3-μm thick) of formalin-fixed and paraffin-embedded tissues. Antigen retrieval was performed in Bond Epitope Retrieval Solution 2 (Leica) at 100 °C for 10 min. Primary rabbit polyclonal antibody against MUC2 (GTX100664, GeneTex) was applied at 1:1,000 dilution. For NLRP6 immunohistochemistry, tissues embedded in paraffin were cut into 5-μm sections. Heat-induced antigen retrieval was performed with 10 mM sodium citrate buffer. Endogenous peroxidases were quenched with 3% hydrogen peroxide for 15 min. Primary anti-NLRP6 antibody (ABF29, Millipore) was diluted 1:1,000 in PBST containing 10% goat serum (Thermo Fisher Scientific) and incubated overnight at 4 °C. Bound antibody was detected using an anti-rabbit horseradish peroxidaselabelled polymer incubated for 30 min (EnVision+ System) and ImmPACT DAB (Vector Laboratories). Slides were then counterstained with haematoxylin, dehydrated and covered.
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5

Mucin 2 Immunofluorescence in Colon Sections

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Mucus immunofluorescence was performed on paraffin-embedded colon sections (4 μm). Slides were incubated with primary Mucin 2 antibody (GTX100664, GeneTex, 1:200) and then Alexa Fluor® 488-conjugated secondary antibody (Servicebio GB2530, Wuhan, China; 1:400), followed by DAPI staining. Images were acquired with an inverted microscope (NIKON ECLIPSE TI-SR, Japan). All morphometric analyses were performed by Image-Pro Plus 6.0 software (Media Cybernetics, Rockville, Md, USA). For quantification, 5 randomly selected 400× fields from each sample were measured.
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6

Colon Tissue Protein Analysis via Immunoblotting and Immunofluorescence

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Immunoblotting was conducted as described previously [24 (link)]. Colon tissues from mice were dissected the next day after completing the WAS procedure. The epithelial layers were gently scraped off, and proteins were extracted. In separate studies, human LS174T cells were collected and processed with the same method. Proteins were separated and blotted with the following primary antibodies: Piezo1 (1:500, 15939-1-AP, Proteintech), H3K9me3 (1:500, 13969, Cell Signaling Technology), T-H3 (1:500, GTX122148, GeneTex), SUV39h1 (1:500, PA5-29470, Thermo-Fisher), Histone Deacetylase 3 (Hdac3) (1:500, GTX1096679, GeneTex), and GAPDH (1:1000; Proteintech).
For immunofluorescence staining, paraffin sections were stained as described in previous research [25 (link)]. Primary antibodies used for incubation were as follows: Piezo1 (1:200, 15939-1-AP, Proteintech), H3K9me3 (1:500, 13969, Cell Signaling Technology), AGR2 (1:200, AF6068, R&D Systems), and Mucin2 (1:200, GTX100664, GeneTex). DAPI (D9542, Sigma, Millipore, St. Louis) was used for nucleic acid staining.
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7

Quantifying MUC2 Protein Expression in Cells

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For the measurement of MUC2 protein expression, cells were fixed in 4% paraformaldehyde and permeabilized with 0.01% Triton X-100 in PBS. The cells were blocked with 10% normal donkey serum (GTX73205, Genetex, Irvine, CA, USA) and incubated at 4 °C overnight with the primary antibody against MUC2 (1:1000 dilution; GTX100664, Genetex, Irvine, CA, USA). Goat anti-rabbit IgG, DyLight 488 (35553, Thermo Scientific) diluted 1:1000 in 2% normal donkey serum was used as the secondary antibody. 4′,6-Diamidino-2-phenylindole (DAPI) (1:10,000 dilution, Sigma, St. Louis, MO, USA) was employed to counterstain the nuclei for 5 min at room temperature. Coverslips were mounted using VECTASHIELD® (Vector Laboratories, Burlingame, CA, USA). Images were obtained, and the fluorescence intensity was quantified using a Nikon C1 plus confocal laser scanning microscope.
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