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12 protocols using sample activation kit 1

1

Quantifying TGF-β and MMP Signaling

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The following materials were used: recombinant human TGF-β1 and TGF-β2 (Promokine, Heidelberg, Germany); recombinant human betaglycan, recombinant human TIMP3 (both from R&D Systems, Wiesbaden, Germany); recombinant human TIMP1 and TIMP2 (both from SinoBiological, Eschborn, Germany) Halt™ Protease Inhibitor Cocktail (100×) (ThermoFisher Scientific, Carlsbad, CA, USA); Cell lysis buffer (Cell signaling technology, Frankfurt, Germany); LY364947, GM6001 (both from Sigma Aldrich, St. Louis, Missouri, USA); Sample activation Kit 1 (R&D Systems); human TGF-beta RIII DuoSet ELISA kit (DY242, range 156–10,000 pg/mL); human TGF-beta 1 DuoSet ELISA kit (DY240, range 31.3–2000 pg/mL); human TGF-beta 2 DuoSet ELISA kit (DY302, range 31.3–2000 pg/mL); Human MMP-2 DuoSet ELISA kit (DY902, range 0.6–20 ng/mL); Human Total MMP-3 DuoSet ELISA kit (DY513, range 31.3–2000 pg/mL). All ELISA kits were purchased from R&D Systems.
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2

Cytokine production by stimulated DCs

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Immature DCs, harvested by gentle pipetting on day 6 and seeded in 24-well plates (1×106 cells/well), were stimulated with 50 ng/mL IFN-γ plus 50 ng/mL TNF-α, or treated with NP[OVA] or NP[OVA+Dex] (10 μg/mL as OVA) for 48 h, except in the experiments that induced TNF-α production from DCs. For TNF-α production, DCs were stimulated with 50 ng/mL IFN-γ and 100 ng/mL lipopolysaccharide (LPS) for 48 h. The amounts of TNF-α, IL-1β, IL-6, IL-12p40, and IL-10 in the culture supernatants were measured using commercial ELISA kits (BD Biosciences). The amount of TGF-β1 was measured using an ELISA kit from R&D systems (Minneapolis, MN, USA) after treating the culture supernatant with the Sample Activation Kit 1 (R&D systems), as previously described.27 (link)
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3

Cytokine production by DCs exposed to NPs

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Immature DCs were harvested by gentle pipetting on day 6 and seeded in 24-well plates (1×106 cells/well). Then, the immature DCs were treated with the indicated NPs (10 μg/ml as OVA) for 48 h. The amounts of TNF-α, IL-1β, IL-6, IL-12p40, and IL-10 in the culture supernatants were measured using commercial ELISA kits (BD Biosciences). TGF-β1 levels were measured using an ELISA kit from R&D systems (Minneapolis, MN, USA) after treating the culture supernatant with the Sample Activation Kit 1 (R&D systems) according to the manufacturer's protocols.
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4

Quantifying TGFβ-2 in A549 Cells

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A549 cells were treated with 5 mM MMA for indicated amounts of time and then the conditioned culture media were collected. The samples were centrifuged for 3 minutes at 300 g to remove any cells and debris and activated using the Sample Activation Kit 1 (R&D Systems) according to the manufacturer’s protocol. Human TGFβ−2 levels in these conditioned media were measured with the Human TGFB2 Quantikine ELISA Kit (R&D Systems) according to the manufacturer’s protocol.
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5

Cytokine Quantification in Serum Samples

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After peripheral blood drawing, each sample was centrifuged at 3500 rpm within 15 min from collection and stored at − 80 °C until analyzed. ELISA kits for the detection of human IL-6, IL-12p70, and TGFβ were obtained from Bio-Techne (UK). The IL-10 detection was assessed with High Sensitivity (HS) ELISA (Bio-Techne, UK). Serum cytokine’s levels were determined according to the manufacturer’s instructions. The IL-6 (sensitivity: 0.7 pg/ml), IL-10 HS (sensitivity: 0.17 pg/ml), IL-12p70 (sensitivity: 5 pg/ml), and TGF-β (sensitivity: 15.4 pg/ml) levels were calculated according to the specific standard curves. TGF-β measurement was performed after its activation (BioTechne, UK). Briefly, latent TGF-β1 serum was activated to its immunoreactive form, using solutions for acid activation and neutralization (Sample Activation Kit 1, R&D Systems®).
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6

Quantification of TGFβ Secretion in Murine Pancreatic Tumors

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The amount of TGFβ secreted by mouse pancreatic tumor cells was quantified using the Mouse TGFβ1 DuoSet ELISA (#DY1679–05, R&D systems), complemented with Sample Activation Kit 1 (#DY010, R&D systems) and DuoSet ELISA Ancillary Reagent Kit 1 (#DY007, R&D systems) according to the manufacturer’s instructions. Conditioned media for TGFβ secretion quantification was collected from KPC and KPCN tumor cells growing in DMEM supplemented with 1% v/v FBS and 2mM L-glutamine with 100μg/ml Penicillin/Streptomycin for 48 hours. Protein concentration of lysates, prepared from remaining cell pellets, was used for data normalization. Human TGFβ1 in serum samples from patients was measured by human DuoSet ELISA kit (#DY240, R&D systems).
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7

Quantifying Proteins in Cartilage Tissues

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For some proteins, the amounts released from cartilage tissues were quantified by bead-based suspension array technology on a Luminex 100/200 analyzer (Luminex, Austin, TX, USA) using commercially available kits (Magnetic Luminex Performance Assay and Human Luminex Discovery Assay, R&D Systems, and C3a Human ProcartaPlex Simplex kit, ThermoFisher Scientific), according to the manufacturers’ instructions. Briefly, 50 µl of PBS containing the released proteins was incubated with a suspension of capture antibody-conjugated magnetic microspheres. The microspheres were then incubated with a biotinylated detection antibody and streptavidin–phycoerythrin conjugate, and fluorescence intensity was measured. For the measurement of TGF-β1, β2 and β3, samples were acid-activated prior to measurement using Sample Activation Kit 1 (R&D Systems).
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8

Quantifying TGF-β2 and IL-6 in Cell Culture

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The expression level of TGFβ2 released in the cell culture medium was detected by ELISA using the Human TGF-beta 2 DuoSet ELISA (R&D System, cat no. DY302, Minneapolis, MN, USA), DuoSet Ancillary Reagent Kit 2 (5 plates, R&D Systems, cat no. DY008, Minneapolis, MN, USA) and Sample Activation Kit 1 (R&D Systems, cat no. DY010, Minneapolis, MN, USA). For IL6 quantification from cell culture, ELISA was performed using the IL6 DuoSet ELISA Kit (R&D System, cat no. DY206-05, Minneapolis, MN, USA) along with the DuoSet Ancillary Reagent Kit 2 (5 plates, R&D Systems, cat no. DY008, Minneapolis, MN, USA).
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9

Quantification of Cytokine Levels

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The amounts of TNF-α, IL-1β, IL-6, IL-12 p40, and IL-10 in the culture supernatants were measured using commercial ELISA kits (BD Biosciences, San Jose, CA, USA). The amount of TGF-β was measured using an ELISA kit of R&D systems (Abingdon, UK) after treating the culture supernatant with Sample Activation Kit 1 (R&D systems) as suggested by the supplier.
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10

Quantifying TGFβ-2 in A549 Cells

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A549 cells were treated with 5 mM MMA for indicated amounts of time and then the conditioned culture media were collected. The samples were centrifuged for 3 minutes at 300 g to remove any cells and debris and activated using the Sample Activation Kit 1 (R&D Systems) according to the manufacturer’s protocol. Human TGFβ−2 levels in these conditioned media were measured with the Human TGFB2 Quantikine ELISA Kit (R&D Systems) according to the manufacturer’s protocol.
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