The largest database of trusted experimental protocols

8 protocols using h 1800

1

Immunostaining of Drosophila Wing Discs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Third instar larvae were dissected to collect their wing imaginal discs. Tissues were fixed with 4% formaldehyde and then washed with PBST (PBS + Triton, 1,000:3) for 5 min for 3 times at room temperature (RT). Block in PBST with Goat Serum (Solarbio SL038, 1:10) at RT for 30 min, then treat with 1st antibody at 4°C overnight. The following antibodies were used: rabbit anti-Yki (gist from Duojia Pan, 1:500); mouse anti-β-Gal (Promega, 1:500); mouse anti-wingless (DSHB 4D4, 1:100); rabbit anti-cleaved Dcp-1 (CST 9578, 1:100); Rat anti-Ci (DSHB 2A1 1:50); rabbit anti-Phospho-Histone H3 (Ser10) (CST 9701, 1:200). Next, wash the tissue with PBST for 10 min for 3 times at RT, then treat with the second antibody at RT for 2 h. Wash with PBST for 5 min for 3 times. For experiments involving nuclear localization of Yki and for Figure 4, additional DAPI staining was conducted by treating the tissue with DAPI (Beyotime C1,002) in PBST (1:1,000) at RT for 10 min. Finally, move the tissue onto a slide glass and mount with mounting media with DAPI (VECTASHIELD H-1,800) and then covered by cover glass.
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of VGAT-GCaMP6f Neurons

Check if the same lab product or an alternative is used in the 5 most similar protocols
3 VGATxGCamP6f mice at P18 and 1 each at P30, P46 and P52 were anesthetized with a terminal dose of sodium pentobarbital (100 mg.kg-,1 (link) I.P, Euthatal, Merial Animal Health) and transcardially perfused, initially with phosphate buffer (PB, 0.1M) to remove blood, and then with paraformaldehyde (PFA, 4% in 0.1M PB, 250 mL). Brains and spinal cords were removed and post-fixed overnight in PFA. Spinal cords were serially sectioned at 40 μm with a vibrating microtome (VT1200, Leica Microsystems) and stored in PBS at 4⁰C. Sections were incubated with anti-PKD2L1 (1:500, rabbit, Proteintech) and anti-GFP (1:1000, chicken, Abcam) dissolved in PBS with 0.2% Triton X-100 with 5% donkey serum as a non-specific binding blocker. Sections were washed (x3, PBS 10 min) before addition of the Alexa Fluor conjugated secondary antibody (1:1000 in PBS, Thermofisher) at room temperature for 2h. Sections were washed (x2 PBS, 10 min) before being mounted on microscope slides and allowed to air dry. Sections were covered using vectashield with DAPI (VectorLabs, cat no. H-1800) and a coverslip was added and sealed using nail varnish.
+ Open protocol
+ Expand
3

Immunofluorescence Staining of Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Srrm2+/− and E14tg2a.4 WT cells were seeded (1×105 cells/cm2) on ethanol-washed and autoclaved glass 0.1% gelatin-coated coverslips and grown under regular conditions for 1 day. Cells were rinsed and fixed in 4% EM-grade PFA (Alfa Aesar, 43368) in 125 mM HEPES-NaOH pH 7.6, for 30 min at room temperature. Aldehydes were quenched (10 min) with 20 mM glycine in PBS. Cells were permeabilised (10 min) in 0.5% Triton X-100 in PBS (w/v). Cells were washed and incubated (three times over 1 h) in blocking solution (1% BSA, 0.2% fish skin gelatin, 0.1% casein, in PBS, pH 7.8). Primary antibodies were diluted in blocking solution and incubated overnight at 4°C in a humid chamber. Cells were washed (three times over 1 h) in blocking solution, before incubation with secondary antibody diluted in blocking solution for 1 h at RT. After incubation, cells were washed in PBS three times for 1 h. DNA was stained with 0.5 µg/ml DAPI (Sigma-Aldrich, D9542) in PBS for 2 min. Cells were washed three times in PBS and mounted in Vectashield (Vector Laboratories, H-1800) before imaging. The antibodies used are listed in Table S16.
+ Open protocol
+ Expand
4

Immunofluorescence Imaging of HL-1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The HL-1 cells were fixed in 4% formaldehyde for 20 min and were washed with PBS three times. The cells were permeabilized with 0.2% Triton for 10 min. The cells were blocked with 10% goat serum for 1 h following permeabilization. The following primary antibodies were added and incubated overnight: acetylated tubulin (Millipore Sigma); HDAC6 (Cell Signaling, Danvers, MA, USA); 4-Hydroxynonenal (Abcam, Cambridge, MA, USA); LC3 (Cell Signaling); ϒ-tubulin (Abcam); and ubiquitin (Abcam). AlexaFluor 488 goat anti-mouse (ThermoFisher), AlexaFluor 488 goat anti-rabbit (ThermoFisher), or AlexaFluor 594 goat anti-rabbit (ThermoFisher) secondary antibodies were added for 1 h at room temperature. The cell nuclei were stained with DAPI in a VECTASHIELD Mounting Medium (H-1800, Vector Laboratories) and imaged using fluorescence microscopy.
+ Open protocol
+ Expand
5

Immunofluorescence and Immunohistochemistry Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor cells were seeded on coverslips embedded with glycine, fixed with 4% formaldehyde and stained. Tumor tissues were fixed in 4% formaldehyde, embedded in paraffin, and sectioned into 4-μm-thick slides. The antigen was retrieved, and endogenous peroxidase activity was quenched through a 30-min treatment in methanol with 3% hydrogen peroxide. Non-specific antigen was blocked for 1 h. The slides were incubated with primary antibodies overnight at 4 °C. After rinsing, HRP (Vector Laboratories, #PK4001 and #PK-6102) or fluorescent second antibody (Thermo Fisher Scientific, #RMG101 and #A24538) was added onto the slides and incubated for 1 h. For IF, the slides were mounted with DAPI (Vector Laboratories, #H-1800) and observed under the fluorescence microscope. For IHC, the slides were incubated with peroxidase-label for 30 min, developed with DAB Kit (SK-4100, Vector Laboratories) and counterstained with hematoxylin. For quantitation, 5 microscopic fields were randomly selected at 400× magnification. Images were analyzed by NIH ImageJ software (https://imagej.nih.gov/ij/).
+ Open protocol
+ Expand
6

Immunostaining for Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue sections were prepared and subjected to antigen retrieval as described above, then blocked in 0.4% v/v Triton X-100, 1% BSA, and 5% NDS for 60 min followed by overnight incubation in primary antibody prepared in 0.4% Triton X-100/PBS at 4°C. Sections were washed in PBS and incubated with secondary antibodies diluted in 0.4% Triton X-100/PBS for 90 min. Finally, slides were washed 3 times in PBS and coverslipped in DAPI-containing mounting medium (H-1400 or H-1800, Vector Laboratories).
+ Open protocol
+ Expand
7

Immunohistochemical Analysis of Mouse Testes

Check if the same lab product or an alternative is used in the 5 most similar protocols
After mice euthanization, the testes were washed in PBS and incubated in 4% paraformaldehyde overnight, followed by five 1-h washes in PBS with shaking at 4°C. Testes were then incubated in 30% w/v sucrose prepared in PBS at 4°C until it sank. Testes are embedded in Tissue-Tek O.C.T. Compound (4583, Sakura), and frozen at −80°C for at least 2 h. Tissue blocks were then sectioned on a cryotome (Leica) to 5 μm thickness and stored at −20°C or −80°C until ready for staining. Sections were briefly hydrated in PBS for 5 min, followed by permeabilization in 0.1% v/v Triton X-100/PBS for 5 min. Sections were then blocked in 3% w/v BSA in PBS with 0.1% v/v Triton X-100 for 1 h at RT, followed by incubation with primary antibody (prepared in blocking buffer) for 1 h at RT. After three washes in PBS, the sections were incubated with secondary antibodies in blocking buffer for 1 h at RT. After three final PBS washes, the slides were mounted in DAPI containing mounting medium (H-1400 or H-1800, Vector Laboratories).
+ Open protocol
+ Expand
8

TUNEL Assay for Testicular Cell Death

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell death was assessed in the control and Wnk1f/f; Wnt7a-Cre testes using the In situ Cell Death Detection Kit (#11684795910, Roche) according to the manufacturer’s instructions. Briefly, formalin fixed paraffin embedded tissues were first sectioned to 5 μm, then deparaffinized in Citrisolv and hydrated through decreased ethanol % (100% X 3, followed by 95%, then 70%, then water). Sections were treated with 20 μg/mL proteinase K (25530-049, Invitrogen) prepared in 10 mM Tris-HCl for 30 min at 37°C. After a brief PBS wash, the sections were incubated with TUNEL reaction mixture (50 μL of enzyme solution mixed into 450 μL Label solution just prior to use) for 60 min at 37°C. Sections were washed 3 X in PBS, followed by coverlipping in DAPI containing mounting medium (H-1800, Vector Laboratories). Note that for each experiment, a negative and positive control were included. For the positive control, the tissue section was incubated with 0.05 U/μL DNase I (18068-015, Invitrogen) for 10 min at RT to artificially induce DNA damage prior to labeling with the TUNEL reaction mixture. For the negative control, the section was incubated with only the Label solution (without the enzyme).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!