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Taqman specific assay probes

Manufactured by Thermo Fisher Scientific
Sourced in United States

TaqMan specific assay probes are oligonucleotide sequences designed to hybridize to a specific target sequence within a DNA molecule. These probes are labeled with a fluorescent reporter dye and a quencher dye, which allows for the detection and quantification of the target sequence during real-time PCR amplification.

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2 protocols using taqman specific assay probes

1

Quantitative miRNA Expression Analysis

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Reactions were performed in triplicate on cDNA samples in 96-well optical plates on an ABI Prism StepOne System (ThermoFisher, U.K.). It consisted of 2 μL of cDNA, 7 μL of PCR-grade water, 10 μL of 2 × TaqMan Universal PCR Master Mix (Applied Biosystems, Foster City, CA, USA), 1 μL of Taqman specific assay probes (Applied Biosystems). Data were recorded using SDS software (v 2.3; PE Applied Biosystems). Advanced miRNA Taqman probes (ThermoFisher) were used for all miR qPCR assays.
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2

qPCR Assay for Gene Expression

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Reactions were performed in triplicate on cDNA samples in 96-well optical plates on an ABI Prism StepOne System (ThermoFisher). Reactions consisted of 2 μL cDNA, 7 μL PCR-grade water, 10 μL 2× TaqMan Universal PCR Master Mix (Applied Biosystems), 1 μL TaqMan-specific assay probes (Applied Biosystems) for PSA, and RPL19 or SYBR green primers for AR, AR-UTR (variants), β-actin (ACTB) and GAPDH (for primer details, see Supplementary Table 2, see section on supplementary materials given at the end of this article). Parameters were 50°C for 2 min, 95°C for 10 min, 40 cycles of 95°C for 15 s and 60°C for 1 min. Data were recorded using Sequence Detector Software (SDS version 2.3; PE Applied Biosystems). Levels were normalised to GAPDH, β-actin and RPL19.
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