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5 protocols using alexa fluor 647 goat anti rat igg

1

Multimarker Immunofluorescence for COVID-19 Analysis

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We used the following antibodies:anti-CD11b(1:500, ab8878, Abcam), anti-CD68(1:500, GB14043, Servicebio), anti-cleaved caspase-3 (Asp175) (5A1E) (1:400, #9664, Cell Signaling Technology, USA), anti-SARS-CoV-2 spike glycoprotein antibody-Coronavirus(1:500, ab272504, Abcam), anti-phospho Akt(1:800, 13038T, Cell Signaling Technology), anti-SQSTM1/p62(1:250, 23214S, Cell Signaling Technology), anti-BCL-2(1:200, sc-492, Santa Cruz Biotechnology), Alexa Fluor 647 goat anti-rat IgG(1:500, ab150159, Abcam), Alexa Fluor 488 goat anti-rabbit (1:500, ab150077, Abcam), Alexa Fluor 647 Goat anti-mouse (1:500, ab150115, Abcam), DAPI (Beyotime Institute of Biotechnology, China).
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2

Immunofluorescent Labeling of Amyloid-Beta

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Briefly, free-floating brain sections were treated with blocking buffer containing 5% bovine serum albumin (BSA, Beyotime, China) in PBS with 0.3% Triton X-100 (PBST) for one hour at 23 °C. Then brain sections were incubated with primary rabbit monoclonal antibodies for mouse anti-β amyloid (D54D2) XP® (1:1,000; 8243S; Cell Signaling Technology, US) diluted with 1% BSA in PBST overnight at 4 °C. After washing three times with PBS, sections were further incubated with secondary antibody (Alexa Fluor® 647 Goat Anti-Rat IgG, 1:1200; ab150167; Abcam, US) at 23 °C. The sections were then washed three times with PBS and counterstained with DAPI (5 μM in PBS; ab228549; Abcam, US), before being mounted with Prolong Gold antifade reagent (ThermoFisher; US).
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Immunofluorescent Colon Tissue Staining

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Colon samples were embedded in O.C.T. (Sakura Finetek), cut in 4 μm sections, and adhered to microscope slides (Thermo Fisher Scientific). All slices were blocked with 100 μL of blocking solution for 30 min at room temperature in a humidified chamber. Then, the primary and secondary antibodies were incubated in a humidified chamber each at room temperature for 60 min. Phosphate-buffered saline (pH 7.4) was used to wash the slices following the primary and secondary antibody incubations three times for 5 min. And sections were counterstained with DAPI. The primary antibodies used were monoclonal rabbit anti-IL17A (Abcam) and monoclonal rat anti-CD3 (Abcam), respectively, and both were diluted to 1 : 200 in antibody dilution buffer (Solarbio). The primary antibodies were fluorescently labelled separately with Alexa Fluor 488 goat anti-rabbit IgG (Abcam) and Alexa Fluor 647 goat anti-rat IgG (Abcam) secondary antibodies, that were diluted to 1 : 1000 in antibody dilution buffer (Solarbio).
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Quantifying Macrophage Phenotypes via Immunofluorescence

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RAW264.7 macrophages seeded on glass-bottom dishes were fixed in 4% paraformaldehyde (KeyGen Biotech, China) and then permeabilized with ice-cold 0.5% TritonX-100. The cells were blocked in PBS containing 10% bovine serum albumin (KeyGen Biotech, China) for 30 min and then were incubated with rabbit monoclonal antibody inducible nitric oxide synthase (iNOS) (Bioss Antibodies, China) and rat monoclonal antibody F4/80 (Abcam, USA) overnight at 4°C. After washing with PBS, cells were incubated with Alexa Fluor 488 goat anti-rabbit IgG (Abcam, USA) and Alexa Fluor 647 goat anti-rat IgG (Abcam, USA) for 1 h at 37°C. Finally, cells were counterstained with 50 mg/ml 4′,6-diamidino-2-phenylindole (DAPI) (KeyGen Biotech, China) before capturing images with a confocal microscope (Zeiss, Germany).
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5

Immunofluorescence Staining of Mouse Tissues

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Immunofluorescence staining was performed as described previously.32 (link) Briefly, paraffin-embedded tissues of mice samples were cut into 3 µm sections and they were dewaxed in xylene and rehydrated in graded ethanol solutions. Antigen retrieval was performed with citrate buffer (6 pH) for 10 minutes at 95°C. Sections rinsed in PBS for 5 min. Non-specific labeling was blocked by incubation with 1% BSA at room temperature for 30 min. Sections were then incubated with anti-CD11c (1:200; Cell signaling Technology) and anti-F4/80 (1:200; Abcam) primary antibodies at 4°C overnight. Subsequently, Alexa Fluor 488 goat anti-rabbit IgG (1:200; Abcam) and Alexa Fluor 647 goat anti-rat IgG (1:200; Abcam) were used as secondary antibodies for 2 hours in the dark at room temperature. The nucleus was stained using SlowFade Diamond Antifade Mountant with DAPI (Life Technologies, Waltham, Massachusetts, USA). The samples were visualized by Keyence BZ-9000. All images were analyzed by Keyence BZ-X Analyzer software.
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