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Fgl400

Manufactured by Thorlabs

The FGL400 is a long-pass glass filter from Thorlabs. It has a cut-on wavelength of 400 nm and is designed to transmit wavelengths above this value while blocking shorter wavelengths.

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6 protocols using fgl400

1

Fabrication of Photopolymerized LC Networks

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The LCP networks utilized in this study are fabricated through the photopolymerization of liquid crystalline monomers, a diacrylate, (LC mesogen, RM82; Merck) and an azobenzene chromophore, (A1, A6A; SYNTHON Chemicals GmbH), initiated by a photoinitiator (Irgacure 819, 1 mol %: Ciba). Prior to polymerization, the monomers are dissolved in dichloromethane to obtain a homogeneous mixture, and subsequently the solvent is evaporated. Polymerization is done in a glass cell, made by gluing two glass slides coated with a polyimide alignment layer (Optimer AL1051; JSR Mircro) using UV-curable glue containing 20-µm glass bead spacers. Cell filling is done at 110 °C; at this temperature the LC mixture is isotropic. The filled cell is then cooled to 95 °C, at which temperature the LC mixture is nematic. Photopolymerization is done for 15 min, using an Exfo Omnicure S2000 lamp. A cutoff filter (λ ≥ 400 nm, FGL400S; Thorlabs is used during polymerization. A thermal treatment at 120 °C for 10 min releases thermal stresses that arise from polymer shrinkage during polymerization. After polymerization, the cell is opened, and the films are peeled from the glass with razor blades and cut into strips, in which the alignment direction of the planar side is parallel to the long side of the film. The cut strips are 2 cm long and 0.5 cm wide.
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2

Bacterial Fluorescence Imaging with CdS

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Following bacterial cell culture with or without CdS, bacterial cells are centrifuged and resuspended in a fresh M9 solution to maintain the same fluorescent background. A drop of bacterial suspension was then transferred to the microscope slide and sealed with a glass coverslip and microscope nail polish (Fisher Scientific) to prevent the evaporation of buffer. The fluorescent images of bacteria with CdS were taken with a Nikon eclipse Ti2 inverted microscope with the excitation light at 488 nm. Microspectrofluorometry of bacterial culture was performed on an inverted microscope (Olympus IX71) using an UPlanFL100x/1.30 (Olympus) oil lens. A fluorescent X-Cite lamp (120PC Q, Lumen Dynamics) was used as a light source for excitation. A U-MNUA2 filter cube with BP360-370 excitation filter and DM400 dichroic, but without emission filter, was used for spectrum recording. Residual scattering of excitation wavelength has been filtered out using GG400 colored glass filter (400 nm, long-pass; FGL400S, Thorlabs) before analysis in the spectrometer. Spectra were recorded using a Fergie spectrometer and LightField software (Princeton Instruments). The spectra were corrected after measurement for detector quantum efficiency and dichroic mirror and long-pass filter transmissions using data obtained from technical specifications.
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3

Liquid Crystal Photopolymerization Alignment

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The alignment cells
were filled with the LC mixtures at 115 °C through capillary
action. The cells were then slowly cooled such that the polymerization
temperature was Tpol = 92 °C and
left at that temperature for 15 min to ensure monodomain alignment.
For simultaneous photopolymerization, the samples were then exposed
to a flood UV exposure (5 mW/cm2 UVA, Oriel Instruments)
for 5 min. For sequential photopolymerization, a 400 nm longpass filter
(Thorlabs FGL400) was used in the first illumination step to exclusively
activate the free-radical initiator for 5 min. A subsequent flood
UV exposure for 5 min polymerized the oxetane LC monomers. A postcure
of 30 min at 130 °C in an oven ensured maximum conversion and
removed any polymerization-induced stresses. The cells were then opened,
and the freestanding films were removed from the glass substrates.
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4

Self-Made Microscope for STED and Scintillator Imaging

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For STED light spot reduction and scintillator image enlargement, a self-made microscope system was used, as shown in Fig. 6(a,b). The reflected STED light and the scintillator luminescence were separated from the sampled light using a dichroic mirror (DMSP 425, Thorlabs) and an optical filter (FGL 400, Thorlabs) inserted between an infinity-corrected objective (NA = 0.2; UV10X, Union Optical) and an imaging lens (UV Tube lens, Union Optical). The camera head (DS-Fi1, Nikon) for image detection has 2560 × 1920 pixels and deposited colour filters. The camera head colour filter operates in the blue (390–510 nm), green (480–600 nm), and red (580–680 nm) wavelength ranges when transmittance of 0.3 is the boundary condition. The camera head can separate the image colours and thus can separate the excitation light and the luminescence light if their colours are different. The intensities of the STED light and the scintillator luminescence were normalized using the measurement time and the number of pixels. The STED light beam diameter on entering the objective was 6 mm for 3.40 eV excitation and 4 mm for SX excitation. The effective NA of the objective was 0.067 under UV excitation and 0.044 under SX excitation.

Layout of optics used in (a) the microscope unit for UV excitation and (b) the microscope unit for SX excitation.

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5

Quantifying E. coli Growth Dynamics

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Colonies of E. coli (MG1655) were grown on solid Luria Bertani (LB, Sigma Aldrich)-agar media overnight at 37°C from freezer stocks (40% glycerol, −80°C) and stored at 4°C. For a microplate assay, three individual colonies were grown overnight in LB and diluted 1:100 when incorporated with the various QDs in fresh media. Separate 96-well flat-bottom plates were prepared for light and dark conditions, the OD of which was measured using a Tecan GENios at 562 nm. Plates were shaken at 225 rpm in a 37°C incubator between measurements. The dark plate was wrapped in aluminum foil while the edge of the light plate was sealed with parafilm to reduce evaporation. The light source was modulated before each experiment to provide the desired intensity and was equipped with a 400 nm longpass filter (ThorLabs FGL400) and a 350-700 nm bandpass filter (FGS900-A) to remove UV and IR light. The fits were done using Gompertz function, with growth rate (μ), stationary phase population (S) and λ is the lag time: (Zwietering et al., 1990 (link)).
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6

Imaging Neural Activity in Embedded Fish

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For the imaging of neural activity in embedded fish in experiments 2, 4, and 5, a 5-d-old larva was embedded at the bottom of the central glass compartment in 2% low-gelling-temperature agarose (Merck). The agarose was carefully removed around the eyes and mouth upon hardening and the arena was filled with 3 mL of water. Calcium fluorescence was recorded with a custom-made epifluorescence microscope equipped with a ×10 water-immersion objective (UMPLFLN, Olympus), a set of green fluorescent protein emission-excitation filters (FGL400, MD498, and MF525-9, Thorlabs) and a mounted blue light-emitting diode (LED) controlled by a driver (MWWHL4, LEDD1B, Thorlabs). Images were collected at 5 Hz via a custom-written Python script using the Pymba wrapper for interfacing with the camera (Mako G319B, Allied Vision).
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