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19 protocols using enhanced chemiluminescence kit

1

Oxidative Stress and Cytoprotective Effects

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The MIN6 cells were plated in 6-well plates at a density of 4 × 105 cells per well. Cells were treated with 125 μM H2O2 for 2 h, then replaced with fresh medium containing various concentrations of SFG and incubated for 24 h. The MIN6 cells were lysed with cell lysis buffer containing a protease inhibitor cocktail. Protein concentrations were determined by a bicinchoninic acid protein assay kit (FdBio Science, Hangzhou, China). Total protein extracts were denatured and separated by 10% or 12.5% sodium dodecyl sulfate–polyacrylamide gel electrophoresis. The membranes were incubated with primary antibodies for detection at 4°C overnight. Subsequently, the membranes were incubated with horseradish peroxidase-conjugated anti-rabbit or anti-mouse secondary antibody. The proteins were visualized using an enhanced chemiluminescence kit (FdBio Science, Hangzhou, China).
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2

Quantitative Analysis of Recombinant Proteins

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Proteins were analyzed by 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). Protein samples were supplemented with loading buffer (TransGen Biotech, Beijing, China), followed by boiling at 100 °C for 10 min. After electrophoresis, gels were stained with Commassie Brilliant Blue R-250. Photos were taken with a digital camera (Nikon, Nikon, Japan). For protein quantification, different concentrations of bovine serum albumin (BSA) were used as standards. A standard curve was drawn using corresponding signal intensities of protein bands as quantified by ImageJ software (NIH, Bethesda, USA). Western blot analysis was performed with nitrocellulose membranes temporarily stained with Ponceau S dye to visualize transferred proteins. The membranes were incubated with an anti-His antibody (1:10 000 dilution; TransGen Biotech, Beijing, China). A goat-anti-mouse IgG antibody coupled to horseradish peroxidase (1:10 000 dilution; TransGen Biotech, Beijing, China) served as second antibody. The membranes were developed with an enhanced chemiluminescence kit (FDbio Science, Hangzhou, China).
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3

Western Blot Protein Quantification

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Total proteins were isolated from cells using RIPA buffer (Beyotime). The collected supernatant was subjected to quantification with the aid of Bicinchoninic Acid Protein Assay Kit (Thermo Fisher Scientific). Proteins were segregated with 4%–20% SDS‐PAGE (GenScript) and transferred into.22 µm PVDF membranes (Millipore), followed by the incubation in 5% non‐fat milk for 1 h. The membranes were then incubated in primary antibodies at 4°C overnight. The next day, after being washed at least three times, the membranes were incubated in secondary antibodies at room temperature for 1 h. The imaging system (Clinx) was applied to detect the immunoblots using enhanced chemiluminescence kit (FDbio science). The antibodies are shown in Table S3.
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4

Quantitative Protein Analysis Protocol

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Total proteins were isolated from cells by using a total protein extraction kit (Vazyme, Nanjing, China), and they were quantified by using a BCA protein assay kit (Vazyme). The proteins were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to a polyvinylidene fluoride membrane (BD). The membrane was blocked with 5% skim milk for 3 h and incubated with specific primary antibodies, including anti-SMP-30 (1:200; Abcam, Cambridge, England) and anti-β-actin (1:5000; Fdbio, Hangzhou, China) overnight at 4°C. Then, the membrane was incubated with horseradish peroxidase-conjugated secondary antibody (1:5000; Fdbio) for 2 h at 25°C. The protein bands were visualized by using an enhanced chemiluminescence kit (Fdbio) and quantified by using a gel imaging analysis system (Olympus, Tokyo, Japan).
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5

Western Blot Analysis of Protein Expression

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All prepared cells were homogenized in protein lysate buffer for 30 min at 4 ℃, and debris was removed by centrifugation at 12,000 g for 15 min at 4 ℃. The protein concentration was ascertained by a BCA protein assay kit (KeyGEN BioTECH, Jiangsu, China). Following the loading buffer addition, 30 µg of each protein sample was electrophoresed, transferred to PVDF membranes (0.2 μm; Millipore, Bedford, MA), and blocked for 2 h in silk milk. Subsequently, the anti-human primary antibody was applied to the membranes for immunoblotting overnight at 4 ℃. Following three times TBST washing, the membranes were incubated for 1 h at room temperature with horseradish peroxidase (HRP)-conjugated secondary antibodies. The HRP signal was then detected by an enhanced chemiluminescence kit (Fdbio Science, Zhejiang, China). Antibodies for GAPDH (10494-1-AP), Tubulin (66031-1-Ig), LILRB3 (18260-1-AP), BAX (50599-2-Ig), BCL2 (12789-1-AP), Caspase 3/p17/p19 (19677-1-AP), P21 (10355-1-AP), Cyclin D1 (60186-1-Ig), and CDK4 (11026-1-AP) were obtained from Proteintech (Wuhan, China). Antibodies for NRF2 (R1312-8), HO-1 (ET1604-45), SOD2 (ET1701-54), and NQO1 (JF440-1) were provided by HUABIO (Hangzhou, China).
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6

Molecular Signaling Pathways Modulation

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After treatment with siRNA negative control (si-NC), si-Spry3, agomiR-NC, agomiR-18a, agomiR-BART10-5p, agomiR-18a combined agomiR-BART10-5p, antagomiR-NC, antagomiR-18a, antagomiR-BART10-5p, and antagomiR-18a combined antagomiR-BART10-5p, HONE1 and HONE1-EBV cells were harvested and lysed in lysis buffer supplemented with protease inhibitors. MicroRNA mimics, agomiRs, inhibitors, and antagomiRs were transfected at 50 nmol/L with Lipofectamine 2000 reagent (Invitrogen, USA). Protein lysate was resolved on 10% SDS-PAGE followed by blot transfer onto a polyvinylidene fluoride (PVDF) membrane (Millipore, USA) using the semidry NovaBlot system (Amersham Pharmacia, UK) for western blot analysis. After that, the membranes were first incubated with antibodies against GAPDH (Proteintech, USA), Spry3, Ras, c-Raf, MEK1/2, Erk1/2, mTOR, eIF4E1, VEGF, mmp2, and HIF1-α (Abcam, UK) overnight at 4°C, followed by a 1- to 2-h incubation with horseradish peroxidase-conjugated secondary antibody. The protein signals were detected using an enhanced chemiluminescence kit (Fdbio Science, China) and analyzed using the Bio-Rad (USA) imaging system and the associated software according to the manufacturer’s instructions. Antibodies concentrations are listed in Table S1.
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7

Protein Expression Analysis in HONE1 Cells

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Following incubation with si‐NC (Negative Control), si‐Spry2, agomiR‐NC (Negative Control), agomiR‐BART1‐5p, antagomiR‐NC (Negative Control) and antagomiR‐BART1‐5p, HONE1 and HONE1‐EBV cells underwent lysis in lysis buffer containing protease inhibitors. Equal amounts of total protein were separated by 10% SDS‐PAGE, and protein bands were transferred onto PVDF membranes (Millipore). After membrane blocking, successive incubations were carried out with primary antibodies targeting GAPDH, Spry2, HIF1‐α, et al. (Abcam) overnight at 4°C, and horseradish peroxidase‐conjugated secondary antibodies at ambient for 1–2 h. An enhanced chemiluminescence kit (Fdbio science) was used for detection, and data analysis utilized the Bio‐Rad imaging system and the associated software as directed by the manufacturer.
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8

Protein Expression Analysis by Western Blot

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Cells were harvested and lysed, and protein concentrations were determined by BCA protein assay kit. Equal amounts of purified proteins were separated by 10% SDS-PAGE and transferred onto PVDF membranes. Western signals were detected using Enhanced Chemiluminescence kit (FDbio science). Primary antibodies were used as follows: CDK15 (1:300, GeneTex), PA28α (1:1,000, Cell signaling), PA28β (1:700, Cell signaling), GAPDH (1:1,000, Proteintech), β-Actin (1:1,000, Transkgen). Anti–rabbit or anti-mouse secondary antibody (Earthox) was used at 1:5,000 dilution.
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9

Protein Extraction and Western Blotting

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A protein extraction reagent (Thermo, USA) was used, followed by centrifugation at 12,000 rpm for 15 min to isolate the protein from cells or exosomes. The protein concentration was determined using a bicinchoninic acid assay kit (Thermo, USA) before Western blotting. In the second step, the proteins were transferred onto 0.2 μm polyvinylidene difluoride membranes (Bio-Rad, USA) for 90 min at 300 mA. After blocking with 5% skim milk Tris-buffered saline with 0.1% Tween® 20 Detergent (FDbio, China) for 1 h, we probed the target protein by incubating the membranes overnight at 4°C with primary antibodies. Following this, a secondary antibody was incubated for an hour at room temperature on the membranes. The bands were visualised using an enhanced chemiluminescence kit (Fdbio, China), and the band densities were analysed using ImageJ. Matrix metallopeptidase 9 (MMP-9) (Abcam, USA), NFATc1 (Abcam, USA), Runx2 (Huabio, China), STAT3 (Huabio, China), phosphorylated (p)-STAT3 (Huabio, China), JAK2 (Huabio, China), p-JAK2 (CST, USA), CD9 (Abcam, USA), Alix (Huabio, China), CD63 (Abcam, USA), CD81 (Abcam, USA), and GAPDH (Proteintech, USA) were prepared using primary antibody dilution buffer (1:1000, Beyotime, China). Secondary antibodies (Yeason, China) were prepared using 5% skim milk (1:5000).
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10

Western Blot Analysis of Protein Markers

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Total proteins from cells were homogenized using RIPA buffer. Protein concentrations were determined using the BCA Protein Assay Kit (Thermo Pierce, United States). Proteins were separated with 10% SDS-PAGE, transferred onto a PVDF membrane (Bio-Rad, Hercules, CA, USA) and blocked in 5% nonfat milk. The membrane was incubated with primary antibodies: anti-β-Actin (Proteintech, 66009-1-Ig, 1:4000), anti-Pax7 (Bioss, bs-2413R, 1:1000), anti-SRF (CST, 5147S, 1:1000), anti-MEF2A (Bioss, bs-5485R, 1:1000), and anti-GAPDH (Proteintech, HRP-60004, 1:4000) overnight at 4℃. The membranes were immunoblotted with goat anti-rabbit (Solarbio, SE13 1:5000) or goat anti-mouse (Solarbio, SE131 1:5000) at room temperature for 1h, and an enhanced chemiluminescence kit (Fdbio) was used to visualize specific protein bands as previously described.
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