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18 protocols using mouse igg1 isotype control

1

Feline PBMC Isolation and Functional Analysis

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PBMCs from specific pathogen-free cats (one 3 year olds, four 4 year old and two 6 year old), which are kept in our veterinary teaching hospital or NIPPON ZENYAKU KOGYO Co., Ltd. as a blood donor, were separated by density gradient centrifugation using Lymphoprep (Axis-shield, Oslo, Norway). For PD-1 and PD-L1 expression analysis, the isolated PBMCs were cultured in R10 for 1.5 h to attach monocytes onto the culture dish, and only the lymphocytes in the supernatant were collected. The collected PBLs were cultured in R10 medium in the absence (unstimulated control) or presence of 10 µg/mL of Con A at 37 °C for 48 h. The cells were stained with antibodies for flow cytometric analysis.
For the IFN-γ production assay, PBLs are collected by incubating PBMCs and attaching monocytes as in the flow cytometry analysis, 2 × 105 PBLs of were cultured in R10 medium in the presence of 10 µg/mL of Con A with 10 µg/mL of mouse IgG1 isotype control (Biolegend) or anti-PD-1 antibody (1A1-2), or rat IgG2a isotype control (Biolegend) or anti-PD-L1 antibody (G11-6), or cat IgG isotype control (Jackson ImmunoResearch Laboratories) or anti-PD-1 chimeric antibody (ch-1A1-2) at 37 °C for 48 h. The cell supernatants were collected, and the amount of IFN-γ was measured with DuoSet ELISA Development System feline IFN-γ (R&D systems, Inc.).
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2

Evaluating CD40 Expression in PBMC from MS Patients

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PBMC separated from healthy donors and MS patients were stained with PE-labeled anti-human CD19 mAb (Biolegend), and FITC-labeled anti-CD80 mAb, anti-CD86 mAb, anti-CD40 mAb or mouse IgG1 isotype control (Biolegend) followed by a two-color flow cytometry analysis on FC500 flow cytometer (Beckman Coulter). Results were analyzed with CXP software (Beckman Coulter). To analyze the effect of silencing Dicer on CD80 and CD86 expressions, Ramos cells were stained with FITC-labeled anti-CD80 mAb or anti-CD86 mAb (Biolegend). Mean fluorescence intensity (MFI) of CD80 (or CD86) was calculated as a difference between MFI of cell samples stained with anti-CD80 mAb minus MFI of cell samples stained with isotype control Ab. CD80 and CD86 expression change on transfected cells was evaluated by the fold change of MFI, calculated as the ratio of MFI of cells transfected with Dicer siRNA/MFI of cells transfected with negative control siRNA.
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3

Chicken Immune Cell Characterization

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Monoclonal antibodies against chicken monocyte/macrophages (mouse anti-chicken monocyte/macrophages-PE), CD4 (mouse anti-chicken CD4-PE) and CD8 (mouse anti-chicken CD8α-FITC) were purchased from Southern Biotechnology (Birmingham, Ala, USA). Mouse anti-chicken CD40 and mouse anti-chicken CD86 monoclonal antibodies were used as primary antibodies (purchased from Bio-Rad, Raleigh, NC, USA). Anti-mouse-FITC IgG antibody was used as secondary antibody. Goat anti-mouse IgG, Streptavidin-PerCP/Cy5.5 and Mouse IgG1 isotype control were purchased from Bio Legend (San Diego, CA, USA).
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4

ACE2 and TMPRSS2 Expression in 293FT Cells

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293FT/ACE2/TMPRSS2/DSP1-7 cells in 24-well plates were treated with the indicated concentrations of the compounds for 2 days. Cells were harvested using Cellstripper (Corning) and fixed with 4% formaldehyde before incubation with either anti-ACE2 antibody (Proteintech) or mouse IgG1 isotype control (BioLegend) antibody at 4°C. Cells were stained with PE-conjugated secondary antibody (Thermo Fisher Scientific) and analyzed using the FACSCanto II instrument (BD Biosciences, San Jose, CA, USA). Data were analyzed using the FlowJo software (Tree Star Inc., San Carlos, CA, USA).
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5

Neutrophil Adhesion and Phagocytosis Assays

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Neutrophils were incubated with 80 nM (10 μg/ml) of wildtype (WT) or mutated SAP, and their binding to human plasma fibronectin (Trevigen, Gaithersburg, MD) was assessed as previously described (12 (link)). To determine the effect of Fcγ receptor ligation on neutrophil adhesion, neutrophils were incubated with 5 μg/ml of either anti-FcγRI antibody clone 10.1 (mouse IgG1, eBiosciences), anti-FcγRII antibody clone Clkm-5 (mouse IgG1, Millipore, Billerica, MA), anti-FcγRII antibody clone FUN-2 (mouse IgG1, Biolegend), anti-FcγRII antibody clone AT10 (mouse IgG1, Abcam, Cambridge, MA), anti-FcγRIII antibody clone 3G8 (mouse IgG1, Biolegend), or a mouse IgG1 isotype control (Biolegend). Phagocytosis of FITC-conjugated Zymosan A bio-particles (Life Technologies) by macrophages was assayed as described previously (24 (link)). To measure the binding of SAP to Zymosan A bio-particles, we first quenched the fluorescence of FITC-conjugated Zymosan A with 2% Trypan blue in PBS for 20 minutes and then incubated the quenched Zymosan A bio-particles with 240 nM (30 μg/ml) of WT SAP or mutant SAP in 20 mM Tris, 140 mM NaCl, 2 mM CaCl2 for 1 hour. The bio-particles were then washed, and bound SAP was detected by staining with anti-SAP antibody clone 5.4A (Millipore) and goat anti-mouse Alexa Fluor-647 (Life Technologies) on an Accuri C6 flow cytometer (BD Bioscience).
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6

Cardiac Troponin T Expression Analysis

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On the day of analysis, cells were washed with Dulbecco’s phosphate buffered saline no calcium, no magnesium (DPBS-/-) (Thermo Fisher Scientific) and dissociated with Trypsin-EDTA (0.05%) (Thermo Fisher Scientific) at 37°C for 5–15 min (1ml/well). Cells were then neutralized with an equal volume of RPMI medium (Thermo Fisher Scientific) supplemented with 10% fetal bovine serum (FBS) (HyClone) and centrifuged at 300 × g for 4 min at 4°C. Samples were prepared as previously described (Burridge et al., 2014 (link)). An antibody against cardiac troponin T (TNNT2) (Abcam) (Waas et al., 2019 (link)) or mouse IgG1 isotype control (BioLegend) were applied for 1 h at 4°C. Cells were washed once with wash buffer (0.5% BSA and 0.1% Triton X-100 in DPBS-/-). Goat anti-Mouse IgG1 secondary antibody (Thermo Fisher Scientific) was then applied, then washed once with wash buffer. Cells were analyzed using the CytoFLEX Flow Cytometer (Beckman Coulter) or Attune NxT Flow Cytometer (Thermo Fisher Scientific). The results were analyzed with the software FlowJo 10.6.2. Populations were gated against <2% of the isotype control.
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7

Immune Checkpoint Antibody Staining

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All fluorescence-conjugated mAbs, including anti-human CD8+ (HIT8a), were purchased from BioLegend (San Diego, CA, USA). Anti-human CD119 (IFNγ receptor α chain, GIR-208) mAb, anti-human IFNγ (NIB42) mAb, and mouse IgG1 isotype control were purchased from BioLegend. Anti-human CD3 (OKT3) mAb was purchased from BD Biosciences (San Jose, CA, USA). Anti-mouse PD-1 (RMP1–14), anti-mouse CTLA-4 (9D9) and anti-mouse GITR (DTA-1) mAbs were produced from hybridomas and were purified by protein G columns.
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8

Antibody-mediated Protection Against Pneumonia

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Groups of 7 unanesthetized mice were injected intraperitoneally (i.p.) with 20 μg of antibodies or a mouse IgG1 isotype control (BioLegend). An hour later, mice were injected i.p. with 1 × 104 CFU of mid-log-phase WU2 strain bacteria. Animals were monitored every 12 h and the ones displaying morbidity criteria according to our IACUC-approved animal protocol were euthanized at a humane endpoint.
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9

Therapeutic Antibody Characterization in Mice

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Therapeutic antibodies were as follows: Anti-Tim-3 mAb (Clone RMT3-23; Catalog#: BE0115; BioXcell, West Lebanon, NH, USA), Rat IgG2a isotype control (Clone 2A3; Catalog#: BE0089; BioXcell), anti-CEACAM1 mAb (Clone MAb-CC1; Catalog#: 134504; Biolegend, Santa Cruz, CA, USA), and Mouse IgG1 isotype control (Clone MOPC-21; Catalog#: 400153; Biolegend). Antibodies for flow cytometry were as follows: anti-mouse CD3e (Catalog#: 15-0031-82; eBioscience, San Diego, CA, USA), anti-mouse CD4 (Catalog#: 12-0041-82; eBioscience), anti-mouse CD8a (Clone 53-6.7; Catalog#: 11-0081-82; eBioscience), anti-mouse CD25 (Catalog#: 25-0251-82; eBioscience), and anti-mouse Foxp3 (Catalog#: 11-5773-82; eBioscience). Antibodies for depletion were as follows: anti-CD4 (Clone GK1.5; Catalog#: BE0003-1; BioXcell) and anti-CD8 (Clone 2.43; Catalog#: BE0061; BioXcell).
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10

ACE2 Expression Quantification by Flow Cytometry

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The details of this procedure have been described previously. 6) (link) Cells were fixed with 4% formaldehyde before incubation with either anti-ACE2 antibody (ProteinTech) or mouse IgG1 isotype control (BioLegend) antibody at 4 °C. Cells were stained with PE-conjugated secondary antibody (Thermo Fisher Scientific) and analyzed using the FACSCanto II instrument (BD Biosciences). Data were analyzed using the FlowJo software (Tree Star Inc., San Carlos, CA, U.S.A.).
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