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7 protocols using anti hsp60

1

Antibody Reagents for Western Blot Analysis

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Antibodies: anti-HA tag (clone 3F10) (Roche Applied Science), anti-β-actin and anti-alpha-tubulin (Sigma-Aldrich), anti-Smac (Upstate Cell Signaling Solutions, Lake Placid, NY), anti-Hsp60 (Enzo Life Sciences, Plymouth Meeting, PA), anti-VDAC1 (Calbiochem, Darmstadt, Germany), anti-GAPDH, anti-PDK4 and anti-Vinculin (Santa Cruz), anti-PGC-1α (a gift from Dr. Daniel P. Kelly, Sanford-Burnham Medical Research Institute, FL), anti-pAMPK, anti-pCREB and anti-CREB (Cell Signaling Technologies, Boston, MA), anti-CHCHD4 (Protein-Tech Group, IL), anti-Tim23 (BD Biosciences, San Diego, CA). The peroxidase-conjugated goat anti-rat, goat anti-rabbit, goat anti-mouse and horse anti-goat antibodies were from Vector Laboratories (Burlingame, CA). Rabbit polyclonal antibodies specific for human CHTM1 were generated in our laboratory through ProSci Inc. (Poway, CA) using full-length recombinant human CHTM1 protein purified from Escherichia coli. For cell transfections, Mirus (Madison, WI) and Lipofectamine 2000 (Invitrogen, Carlsbad, CA) were used. Restriction endonucleases were from New England BioLabs (Ipswich, MA). PKA inhibitor-H89, p38 inhibitor-SB203580, PI3K inhibitor-LY294002 and PKC inhibitor-GO6983 were from Sigma-Aldrich (St. Louis, MO). Other chemical reagents were from Thermo Fisher Scientific and Sigma-Aldrich.
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2

Antibody Reagents for Western Blot Analysis

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Antibodies: anti-HA tag (clone 3F10) (Roche Applied Science), anti-β-actin and anti-alpha-tubulin (Sigma-Aldrich), anti-Smac (Upstate Cell Signaling Solutions, Lake Placid, NY), anti-Hsp60 (Enzo Life Sciences, Plymouth Meeting, PA), anti-VDAC1 (Calbiochem, Darmstadt, Germany), anti-GAPDH, anti-PDK4 and anti-Vinculin (Santa Cruz), anti-PGC-1α (a gift from Dr. Daniel P. Kelly, Sanford-Burnham Medical Research Institute, FL), anti-pAMPK, anti-pCREB and anti-CREB (Cell Signaling Technologies, Boston, MA), anti-CHCHD4 (Protein-Tech Group, IL), anti-Tim23 (BD Biosciences, San Diego, CA). The peroxidase-conjugated goat anti-rat, goat anti-rabbit, goat anti-mouse and horse anti-goat antibodies were from Vector Laboratories (Burlingame, CA). Rabbit polyclonal antibodies specific for human CHTM1 were generated in our laboratory through ProSci Inc. (Poway, CA) using full-length recombinant human CHTM1 protein purified from Escherichia coli. For cell transfections, Mirus (Madison, WI) and Lipofectamine 2000 (Invitrogen, Carlsbad, CA) were used. Restriction endonucleases were from New England BioLabs (Ipswich, MA). PKA inhibitor-H89, p38 inhibitor-SB203580, PI3K inhibitor-LY294002 and PKC inhibitor-GO6983 were from Sigma-Aldrich (St. Louis, MO). Other chemical reagents were from Thermo Fisher Scientific and Sigma-Aldrich.
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3

Mitochondrial Isolation and Characterization

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Mitochondria from HEK293 cells were prepared according to previously established protocols [16 (link)]. Water-soluble digitonin (Sigma–Aldrich, St. Louis, MO, USA) was used for permeabilization. Following 5 μg/mL proteinase K treatment, 100 μM PMSF was added to stop the enzyme activity. Anti-mitofusin 2 (Abcam, Cambridge, MA, USA), anti-Smac (Cell Signaling Technology, Danvers, MA, USA), and anti-HSP60 (Enzo Life Sciences, Plymouth Meeting, PA, USA) primary antibodies were used as markers of the outer membrane, the mitochondrial intermembrane space, and matrix, respectively.
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4

Antibody Sources for Protein Detection

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Anti‐MITOL rabbit polyclonal antibody was produced as described previously. Anti‐β‐actin and anti‐FLAG‐M2 antibodies were purchased from Sigma. Anti‐Parkin and anti‐VDAC were purchased from Cell Signaling Technology. Anti‐Parkin (phospho‐Ser65) was purchased from UBIQUIGENT. Anti‐Tom20 and anti‐calnexin were purchased from Santa Cruz Biotechnology. Anti‐ubiquitin and anti‐GFP were purchased from MBL. Anti‐myc was obtained from Recenttec. Anti‐HA was obtained from Proteintech. Anti‐GST and BAPTA‐AM were purchased from Wako. Anti‐HSP60 was purchased from Enzo Life Sciences. Anti‐FKBP38 and anti‐K63‐chain were purchased from Abcam. Anti‐K48‐chain was purchased from Millipore. Carbonyl cyanide m‐chlorophenylhydrazone (CCCP) and chloroquine diphosphate were obtained from Wako. MG132, lactacystin, Z‐VAD‐FMK, and bafilomycin A1 were obtained from Peptide Institute. Cycloheximide (CHX) was purchased from Sigma.
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5

Immunohistochemical and Immunofluorescent Analysis of Adipose Tissue

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Formalin-fixed, paraffin-embedded SAT sections were used for IHC and IF investigations as described previously (12 (link), 28 (link)). Anti-HSP60 (Enzo LifeSciences, Inc., Lausen, Switzerland), anti-TNF-α (Abcam, Inc., Cambridge, MA, USA), and anti-IL-6 antibodies (Novus Biologicals, LLC, Littleton, CO, USA) were used for IHC. Quantification of the IHC data was performed using ImageScope software version 11.1 (Aperio, Vista, CA, USA) as previously reported (12 (link)). For IF staining, tissue sections were incubated with an Alexa Fluor® 488-conjugated Anti-HSP60 antibody (Bioss Inc., Woburn, MA, USA). DAPI was used at 0.05% for nuclear staining. The sections were analyzed using a Zeiss LSM 710 confocal laser-scanning microscope, and fluorescent images of the representative areas of the adipose tissue were photographed using a × 40 objective.
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Immunoblotting for Mitochondrial Dynamics

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Anti α-tubulin was purchased from Sigma. Anti-LC3, anti-cleaved caspase-3, and anti-VDAC were from Cell Signaling Technology. Anti-p62 was from MBL. Anti-HSP60 was from Enzo Life Sciences. Anti-Drp1 was from Abcam. Anti-Tom20, anti-MID49, anti-mitofusin1, anti-Fis1, and anti-MFF were from Proteintech. Anti-OPA1 was from BD Bioscience. Anti-mitofusin2 was from Santa Cruz Biotechnology. BafilomycinA1 was from LC Laboratories.
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7

Detecting Oligomeric Dynamin-Related Protein 1

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For detecting oligomeric Drp1, cultured cortical neurons were collected in lysis buffer (100 mM NaCl, 5 mM EDTA, 0.5% Triton X-100, 50 mM Tris-Cl, protease and phosphatase inhibitor cocktails, pH 7.4). Then, non-reducing SDS-PAGE was performed using samples that were either left untreated or treated with DTT (1 μM). For mitochondrial fractionation, cultured cortical neurons were rinsed with PBS and collected in pre-chilled mitochondria buffer (250 mM sucrose, 10 mM KCl, 5 mM MgCl2, 1 mM EDTA, 1 mM EGTA, 20 mM HEPES, protease and phosphatase inhibitor cocktails, pH 7.5, 4 °C). Supernatant was obtained by centrifugation at 500 × g for 5 min and 10 000 × g for 15 min at 4 °C. The pellet and supernatant represented the mitochondrial and cytosolic fractions, respectively. Immunoblotting was performed using the following antibodies: anti-Drp1 (1:2000), anti-pDrp1S616 (1:500), anti-CDK5 (1:1000), anti-p35 (1:1000), anti-β-Actin (Sigma-Aldrich, #A5441; 1:2000), anti-HSP60 (Enzo Life Sciences, Farmingdale, NY, USA, #ADI-SPA-806; 1:1000), anti-GAPDH (Santa Cruz Biotechnology, #6C5; 1:1000), anti-Mfn2 (Abcam, Cambridge, MA, USA, #ab56889; 1:1000), anti-Opa1 (BD Biosciences, #612606; 1:1000), anti-Mff (Sigma-Aldrich, #HPA010968; 1:1000) and anti-Fis1 (Abcam, #ab96764; 1:1000).
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