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Medcalc v 20

Manufactured by MedCalc
Sourced in Belgium, United States

MedCalc v.20 is a comprehensive software application designed for statistical analysis and data management. It provides a wide range of statistical tools and functions for medical and scientific research. The software is capable of performing various statistical tests, analyzing data, and generating graphical representations of the results.

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34 protocols using medcalc v 20

1

Statistical Analysis of Continuous Variables

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Continuous variables were provided as mean ± standard deviation unless otherwise specified. Missing follow-up visit values were imputed using the last observation carried forward method for statistical analyses as needed. The generalized liner-mixed model was performed in the statistical analyses of changes among different time points using a graphical user interface for R software (The R Foundation for Statistical Computing, Vienna, Austria) and EZR (Saitama Medical Center, Jichi Medical University, Saitama, Japan). For other statistical analyses, MedCalc v.20.027 software (MedCalc Software, West-Vlaanderen, Belgium) was used. p-values of <0.05 were considered significant.
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2

Analyzing Surgical Outcomes in Glaucoma

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In statistical analyses, the data of IOP and GDS after additional glaucoma surgery were handled as missing data, and the missing data were imputed using the last observation carried forward method. A liner-mixed model was used for comparison of variables at two different time points (pre-operatively/post-operative 6 weeks or preoperatively/post-operative 12 months). Kaplan–Meier analysis was performed to evaluate success rate of surgery. Statistical analyses were performed using MedCalc v.20.027 software (MedCalc Software, Ostend, Belgium) or EZR (Saitama Medical Center, Jichi Medical University, Saitama, Japan), which is a graphical user interface for R software (The R Foundation for Statistical Computing, Vienna, Austria). A p-value less than 0.05 was considered significant.
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3

Statistical Analysis of Clinical Outcomes

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Categorical variables were compared using the chi-squared or Fisher test depending on the number of observations in each 2-by-2 table. Continued variables were compared using the t-Student test if they followed normal distribution or the Wilcoxon test if they did not follow normal distribution. The distribution of the variables was checked by plotting histograms. Survival function with 95% confidence intervals (95% CI) was estimated using the Kaplan–Meyer method. To estimate hazard ratios (HR) and 95% CI, the proportional hazard Cox model was used. All tests were two-sided and were performed at a 0.05 significance level. All analyzes were performed using software: Statistica v. 13.1 (StatSoft Polska, Kraków, Polska) and MedCalc v. 20.027 (MedCalc Software, Ostend, Belgium). The images were plotted in GraphPad Prism v. 9.3 (GraphPad Software, San Diego, California, USA) and in SmartArt Graphics (Microsoft Word v. 16.60; Microsoft Corporation, Redmond, WA, USA).
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4

Evaluating Post-STTA Trabecular Attenuation

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Values were described as medians with interquartile ranges (IQRs) unless otherwise indicated. The Wilcoxon test was used to compare the time of each variable. To compare the differences in variables between two groups (i.e., patients with and without increased TAR after STTA), the Mann–Whitney U test or Chi–square test was used as appropriate. Statistical analyses were performed using MedCalc v.20.027 software (MedCalc Software, Ostend, Belgium). P-values < 0.05 were considered significant.
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5

Postoperative Outcomes After Robotic Versus Manual Pancreatic Surgery

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Patient characteristics were retrieved retrospectively from our prospective database: Age, body mass index (BMI), use of neoadjuvant treatment and ECOG performance score. Patients of the powered group were propensity score matched 1:1 to patients in the manual group using nearest neighbor matching for the covariates listed above.
Univariate and multivariate linear regression models (continuous variables) and logistic regression models (binary variables) were used to determine differences in the incidence of postoperative leakage, Clavien–Dindo complications, length of stay and 90-day mortality after propensity score matching. A P-value of <0.05 was set as the threshold for statistical significance. Statistical analyses were performed in MEDCALC (v.20.027).
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6

Statistical Analysis of Clinical Characteristics

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All statistical analyses were performed using a combination of functions and packages within the R v4.1.0, in addition to Prism v9 (GraphPad Software, La Jolla, CA) and MedCalc v20.027 (MedCalc Software Ltd, Ostend, Belgium). Clinical characteristics among the study groups were evaluated using ANOVA or Kruskal–Wallis testing (for continuous variables) and Chi-squared tests (for categorical variables) and for these comparisons, a p-value <0.05 was considered statistically significant. Adjustments for multiple comparisons were performed using the Benjamini-Hochberg procedure with FDR<0.1 considered significant. Additional details are provided in the figure legends and Supplemental Material.
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7

Diagnostic Potential of MRI Metrics in Rectal Adenocarcinoma

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SPSS 22.0 software (IBM, Armonk, NY) and MedCalc v. 20.0 (MedCalc Software, Ostend, Belgium) were used for the statistical analysis. Measurement data were represented as mean ± standard deviation. The t-test for independent samples (normally distributed and homoscedastic data) and the Mann–Whitney U test (skewed or heteroscedastic data) were used to compare each parameter between the pathologic types, WHO grades (G1-2 vs G3), pT stages (early vs late), and pN stages (N0 vs N1-2). Differences with a p < 0.05 were considered statistically significant. The receiver operating characteristic (ROC) curve of each parameter was plotted, the area under the ROC curve (AUC) was calculated; the best diagnostic threshold for each parameter was determined based on the maximum Youden’s index (Youden’s index = sensitivity + specificity—1), and the diagnostic power of T1 and ADC values in identifying MC and AC, and the grade and stage of rectal adenocarcinoma were evaluated.
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8

Prognostic Role of Immune Checkpoints in Cancer

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Continuous variables were presented as means (standard deviation) or medians
(interquartile ranges, IQRs). Categorical variables were presented as
frequencies with percentages. Differences in the distribution of variables among
groups were evaluated using the chi-square test, Fisher exact test, and
linear-by-linear association for categorical variables. The Student t-test was
used for continuous variables. Cancer specific survival according to the
expression status of immune markers was estimated using the Kaplan–Meier method
and compared using the log-rank test. Univariate and multivariate Cox
proportional-hazard models adjusted by LAG-3 and PD-L1 expression status were
utilized to identify any clinicopathological factors that might have affected
CSS. The risk was expressed as the hazard ratio (HR), and the 95% confidence
interval (CI) was determined using the reference groups. Statistical analysis
was performed with SPSS v25.0 (IBM Corp., Armonk, NY, USA) and MedCalc v20.0
(MedCalc Software, Ostend, Belgium). In all tests, a two-sided
p-value < 0.05 was considered statistically
significant.
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9

Evaluating MRI-based Biomarkers in Glioma

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SPSS 22.0 software (IBM, Armonk, NY) was used for statistical analysis. The Kolmogorov-Smirnov test was performed for analyzing normality. Data conforming to the normal distribution were expressed as mean ± standard deviation (SD). The intraclass correlation coefficient (ICC) was used to evaluate the interobserver consistency of the measured parameters. ICC values of less than 0.40, 0.41–0.75, and greater than 0.75 were considered to indicate poor, fair, and good agreement, respectively. The t-test for independent samples was used to compare APT SI, D, D*, f and ADC parameters between pathological types (MC vs. AC), WHO grades (low- vs. high-grade), pT stages (pT1-2 vs. pT3-4), pN stages (pN1-2 vs. pN0), perineural invasion (positive vs. negative), lymphovascular invasion (positive vs. negative), and EMVI statuses (positive vs. negative). For parameters with significant differences between groups, the receiver operating characteristic (ROC) curve was used to analyze their diagnostic efficacy using the software of MedCalc v. 20.0 (MedCalc Software, Ostend, Belgium). DeLong test was used to compare the differences of area under ROC curves (AUCs). The forward model of binary logistic regression was applied for parameter fusion. Differences with P<0.05 were considered statistically significant.
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10

External Validation of Delirium Risk Models

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Continuous baseline characteristics are presented as mean and SD in the case of normally distributed data, whereas skewed data are presented as median and IQR.
We used multiple performance measures to evaluate model performance based on previously published recommendations for reporting on external validation studies.10 (link) These included: calibration plot (calibration-in-the-large) and model intercept, calibration slope, discrimination with concordance statistic and clinical usefulness with decision curve analysis.
As recommended by Steyerberg et al,12 (link) we used the scaled Brier score as a combined measure of model discrimination and calibration instead of the goodness-of-fit (Hosmer-Lemeshow) test.17 18
Sensitivity and specificity rates were calculated for all models. Negative and positive predictive values strongly depend on delirium incidence and were therefore not reported.
Calculations were performed semi-automatically using R-based validation software V.2.18 (available at https://www.evidencio.org).19 (link) Differences in discriminative power between CPMs were assessed by comparing area under the curves using MedCalc V.20.015.
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