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8 protocols using phytohemagglutinin l pha

1

EBV-Derived Peptide Stimulation Assay

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The following stimulatory agents were used in this study: Overlapping peptide pools of EBV-derived proteins BZLF1 (59 peptides) and EBNA3A (234 peptides) (JPT Peptide Technologies, Berlin, Germany), consisting of 15mers overlapping 11 amino acids in a concentration of 1 µg/ml. The optimal assay concentration of both peptide pools was identified in previous titration experiments. Phytohemagglutinin (PHA-L) (Sigma-Aldrich Chemie, Schnelldorf, Germany) was used as a mitogen for stimulation in a concentration of 2 µg/ml. All experiments were performed in triplicates when cells were stimulated with antigen (BZLF1, EBNA3A) or in six replicates for the PHA-L-stimulated cells. RPMI-10 was added as a negative control in triplicates and anti-CD3 (in a dilution of 1:1000, mAb CD3-2, Mabtech AB, Nacka Strand, Sweden) was used as a positive control in a single well for each donor.
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2

Lentiviral Transduction of T Cells

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Here, we used PMIRH000-PA-1 from System Bioscience as a lentiviral vector in which an mRNA processor was cloned downstream of a CMV promoter and contained copGFP as a reporter gene. The lentivirus vector was produced by GIGA Firme Liège, Belgium. CD3, CD4 and CD8 T cells were extracted from HDs and patients with AML and plated at a density of 2.106 cells/well in 6-well tissue culture plates in 500 µl of RPMI 1640 with 10% heat-inactivated fetal bovine serum, 2 mM L-glutamine, 50 units/ml penicillin, and 50 μg/ml streptomycin (Lonza) in the presence of 5 μg/ml phytohemagglutinin (PHA-L; Sigma) and 20 units/ml IL-2. Forty-eight hours after activation of CD3 T cells, we exposed the cells to the lentiviral vector preparation at a multiplicity of infection of 10 in 500 µl in the presence of 8 µg/ml polybrene (Sigma). EGFP-positive cells were evaluated by flow cytometry at day 6 after transduction.
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3

Lentiviral Transduction of Human Tregs

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Tregs were plated at a density of 106 cells/well in 12-well tissue culture plates in 1 ml of RPMI 1640 supplemented with 10% heat-inactivated fetal bovine serum, 2 mM L-glutamine, 50 units/ml penicillin, 50 μg/ml streptomycin (Lonza), in the presence of 5 μg/ml phytohemagglutinin (PHA-L, Sigma) and 20 units/ml IL-2.
24 h after Treg isolation, cells were exposed to lentiviral vector preparation at a multiplicity of infection of 5 in a volume of 500 μl in the presence of 8 μg/ml polybrene (Sigma). GFP-positive cells were sorted by flow cytometry at day 7 after transduction.
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4

IFN-γ ELISpot Protocol for Virus-Derived Peptides

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Our IFN-γ ELISpot protocol is described in detail elsewhere [2 (link),22 (link)]. The ELISpot was performed in technical duplicates. Here, 50,000 cells/well were seeded for the virus-derived peptide stimulation and 300,000 cells/well for the background assessment (10% DMSO, negative control). Phytohemagglutinin-L (PHA, 10 µg/mL, Sigma-Aldrich) was used as a positive control. Spots were counted with the ImmunoSpot series 6 ultra-V analyzer (CTL Europe GmbH) according to the laboratory standard protocol. No cut-off was set for the spot count.
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5

IFN-γ ELISPOT Assay for HPV E6/E7

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1 × 105 MNCs were seeded into 96-well U bottom plates (Greiner bio-one, Frickenhausen, Germany) in RPMI medium supplemented as above with or without 6 nmol/mL each of Peptivator HPV16 E6 & E7 (Miltenyi Biotec, Bergisch–Gladbach, Germany) for 24 h. The assay was then transferred to IFN-γ-coated MultiScreen-HTS-IP (Merck Millipore, Darmstadt, Germany) for another 48 h. IFN-γ capture (clone 1-D1K) and biotinylated detection (clone 7-B6-1) antibodies were purchased from Mabtech AB (Cologne, Germany); ExtrAvidin®–Alkaline Phosphatase and BCIP/NBT solution was purchased from Sigma-Aldrich (Taufkirchen, Germany). Spots were counted by an AID iSpot FluoroSpot Reader System with the EliSpot 6.0 iSpot software (AID Diagnostika, Straßberg, Germany). Phytohemagglutinin-L (PHA, Sigma-Aldrich, Taufkirchen, Germany) was utilized as a positive control.
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6

Isolation and Activation of Human Immune Cells

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Histopaque-1077, Dulbecco’s phosphate buffered saline (DPBS), Roswell Park Memorial Institute medium (RPMI 1640), Fetal calf serum (FCS), Dimethylsulfoxide (DMSO), Penicillin/Streptomycin, 2-mercaptoethanol and Trypan blue 0.4% were all purchased from ThermoFisher (France). Phorbol 12-myristate 13-acetate (PMA) ionomycin calcium salt, Phytohemagglutinin-L (PHA) and Concanavalin A (ConA) were purchased from Sigma-Aldrich (France). Toxoplasma serological test (TOXOPLASMA ICT IgG-IgM) was purchased from LD Bio Diagnostic (France). ELISPOT plates were purchased from Mabtech (Sweden). MicroBCA kit was purchased from Pierce (France). Vero cells were obtained from ATCC (CCL-81), as well as T.gondii tachyzoites (RH strain, ATCC 50174), and stored in liquid nitrogen until use.
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7

PBMC Proliferation Assay with Bacterial Supernatants

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Human PBMC were isolated from healthy donors using Lymphoprep density centrifugation. The cells were cultured in RPMI-1640 medium supplemented with 10% FCS, 10 mM of L-glutamine, Penicillin (100 U/ml)/Streptomycin (100µg/ml) and 25 mmol/L HEPES (all from Thermo Scientific HyClone, USA). PBMC were seeded at 2×105 cells/well and stimulated at 37°C with serial dilutions of bacterial supernatants. After 72 hours, the cells were pulsed for 6 hours with 1 µCi/well of 3H-thymidine (Perkin-Elmer) after which 3H-uptake was measured in a beta-scintillation counter. Phytohemagglutinin-L (PHA) (1 µg/ml) (Sigma-Aldrich, St. Louis, USA) was used as a positive control for polyclonal T cell activation. The cytotoxic/inhibitory effect was tested by the addition of bacterial supernatants in combination with PHA in the proliferation assay. The bacterial culture medium CCY was included as a negative control, and was found to have negligible effect on proliferation (mean CPM 3088, 1785, 1719 for 1∶50; 1∶100 and 1∶1000 dilution, resp.) and no inhibitory effect on PHA-induced proliferation. PBMC were also stimulated with bacterial supernatants or PHA in combination with purified α-toxin (Sigma-Aldrich, St. Louis, USA), recombinant PVL, recombinant δ-toxin and purified PSM-α3 (all from IBT Bioservices, Gaithersburg, USA) and proliferation assessed.
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8

Endothelial Cell Signaling Pathway Analysis

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RPMI 1640 media, Ham's F12 media, and fetal bovine serum albumin were purchased from Gibco® Life Technologies (Grand Island, NY, USA). MCDB131 media, endothelium cell growth supplement, phytohemagglutinin-L (PHA) and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were obtained from Sigma-Aldrich (St. Louis, MO, USA). Goat polyclonal antibody against β-actin and anti-VCAM-1 were obtained from Santa Cruz Biotechnology (Dallas, TX, USA). The antibodies: anti-phospho-AMPKα (Thr 172 ), anti p-mTOR (Ser 2448 ), anti-phospho NF-κB p65, were purchased from Cell Signaling (Danvers, MA, USA). Monocyte chemoattractant protein 1 (MCP-1) was purchased from ProSpec-Tany TechnoGene Ltd. (Hamada, Israel). Human IL-2, IL-4, TNF-α and IFN-γ ELISA kits were purchased form Invitrogen™ Thermo Fisher Scientific (Vienna, Austria).
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