The largest database of trusted experimental protocols

10 protocols using β actin mab1501

1

Protein Extraction and Immunodetection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein extraction, sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunodetection were performed as previously described.8 (link) For immunodetection, antibodies against SIRT1 and the pro-peptide and active forms of caspase-3 and PARP, as well as the total and phosphorylated forms of Akt (Ser473; no. 4685), extracellular signal–regulated kinase 1/2 (ERK1/2) (Thr202/Tyr204; no. 9101) and NF-κB p65 (Ser536; no. 3033), were purchased from Cell Signaling (Danvers, MA, USA). Antibodies against TrkA (ab76291) and p75NTR (ab52987) were acquired from Abcam. Anti-proNGF was purchased from Alomone Labs (ANT-005). Anti-NGF (AB1528SP) and β-Actin (MAB1501) was acquired from Millipore (Temecula, CA, USA). For semiquantitative analyses, relative protein levels were expressed as fold induction compared with the negative control by normalizing the density of the protein of interest to an internal control.
+ Open protocol
+ Expand
2

Immunoblot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Analysis of protein levels was carried out by immunoblot analysis of whole cell lysates using polyclonal antibodies against PARP1 (H-300, Santa Cruz), cyclin A (C-19, Santa Cruz), p53 (CM5, Novocastra, Newcastle, UK), p-p53 ser15 (9284, Cell Signaling), p38 (C-20, Santa Cruz), p-p38 (Thr180/Tyr182) (sc-17852, Santa Cruz), p16 (M-156, Santa Cruz), p-H2AX Ser139 (07-164 Upstate), p21 (M-19, Santa Cruz), PPM1D/WIP1 (H-300, Santa Cruz), and E2F1 (C-20, Santa Cruz), as well as monoclonal antibodies against pan-Ras-V12 (Ab-1, Calbiochem, Sigma-Aldrich, St. Louis, MO, USA), cyclin D1 (DCS6, Cell Signaling Technology, Inc., Danvers, MA, USA), α-tubulin (T5168, Sigma-Aldrich, St. Louis, MO, USA), β-actin (MAB1501, Millipore, Burlington, MA, USA), and Rb (554136, BD).
+ Open protocol
+ Expand
3

Antibody Sources for Protein Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
PrPC-specific antibodies 3F4 and 8H4 were from Signet laboratories (Dedham, MA) and Sigma Aldrich respectively. Other antibodies were obtained from the following sources: ferritin specific for heavy and light chain (F5012) from Sigma Aldrich, USA, GLUT-1 (NB110-39113) from Novus Biologicals, GLUT-2 (ab54460), and GLUT-3 (ab41525) from Abcam, USA, TfR (13-6800) from Invitrogen, USA, insulin from Santa Cruz Biotechnology Inc. (sc-9168) and Novus Biologicals (NBP2-34260), USA (recognize insulin and a 51-amino acid polypeptide composed of A and B chains connected through the C-peptide), glucagon (sc-13091) from Santa Cruz Biotechnology Inc, USA, and β-actin (MAB1501) from Millipore, USA. HRP-conjugated secondary antibodies (anti-mouse, NA931V, anti-rabbit, NA934V) were from GE Healthcare, UK.
+ Open protocol
+ Expand
4

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues and cells were homogenized and lysed in lysis buffer as previously described [19 (link)]. The protein concentration was determined by Bradford  protein assay (Bio-Rad). Equal amounts of proteins were loaded and immunoblot analysis was carried out according to standard protocol. The blots were visualized using the ECL chemiluminescence system by Amersham Imager 600 (GE healthcare) and quantified by densitometric analysis using ImageQuantTL (GE healthcare). The following antibodies were used: rabbit polyclonal antibodies against FAM13A (HPA038109; Sigma Life Science); PPARγ (2435), β-Catenin (8480), IRS1 (2382), GSK3β (12456), pGSK3βS9 (9336), SIRT1 (9475) from Cell Signaling Technology; GAPDH (60004-1-IG, Proteintech); PLIN1 (GP29; Progen Biotechnik GmbH); ATGL (10006409; Cayman Chemical); C/EBPα (sc-61, Santa Cruz); β-ACTIN (MAB1501) from Millipore.
+ Open protocol
+ Expand
5

Comprehensive Immunoblotting Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following primary antibodies were used for this study: ferritin-H (sc-25617) and β-globin (sc-21757) from Santa Cruz Biotechnology Inc, USA, TfR from Invitrogen, USA (13–6800), α-syn from BD transduction, USA (#610786), ZIP8 (SAB3500598), ZIP14 (HPA016508), and ferritin (F5012) from Sigma, USA, β-actin (MAB1501) and RPE65 (MAB5428) from Millipore, USA, and LAMP1 (ab24170) and α-globin (ab102758) from Abcam, USA. HRP-conjugated secondary antibodies were purchased from GE healthcare, (NA 931V, NA 934V) UK, FITC (4010-02, 1010-02) and Alexa fluor 546 (A11071, A11018) tagged secondary antibodies were from Southern Biotech, USA and Molecular Probes, Invitrogen, USA respectively, and rhodamine tagged transferrin (T-2872) was from Thermo scientific, USA. Ferric ammonium citrate (FAC) (F5879), ferrous ascorbate (A0207) and desferrioxamine (D9533) and all other general chemicals were purchased from Sigma Aldrich, USA.
+ Open protocol
+ Expand
6

Immunoblot analysis of adipogenic proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues and cells were homogenized and lysed in lysis buffer as previously described19 (link). The protein concentration was determined by BCA protein assay (Bio-rad). Equal amounts of proteins were loaded and immunoblot analysis was carried out according to standard protocol. The blots were visualized using the ECL chemiluminescence system by Amersham Imager 600 (GE healthcare) and quantified by densitometric analysis using ImageQuantTL (GE healthcare). The following antibodies were used: rabbit polyclonal antibodies against FAM13A (HPA038109; Sigma Life Science); PPARγ (2435), β-Catenin (8480), IRS1 (2382), GSK3β (12456), pGSK3βS9 (9336), SIRT1 (9475) from Cell Signaling Technology; GAPDH (60004–1-IG, Proteintech); PLIN1 (GP29; Progen Biotechnik GmbH); ATGL (10006409; Caymen Chemicals); C/EBPα (sc-61, Santa Cruz); β-ACTIN (MAB1501) from Millipore.
+ Open protocol
+ Expand
7

Analyzing Protein Localization and Function

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following primary antibodies were used for this study: Ferritin-H (sc-25617) (lot #J2610 and lot #K0713) from Santa Cruz Biotechnology Inc, USA, α-syn from BD transduction, USA (#610786), β-actin (MAB1501) and RPE65 (MAB5428) from Millipore, USA, LAMP1 (ab24170) and NCOA4 (ab56356) from Abcam, USA, LC3B (#2775), Rab1A (#13075) from Cell Signaling Technology, USA. HRP-conjugated secondary antibodies were purchased from GE healthcare, (NA 931 V, NA 934 V) UK, Alexa 488 and Alexa fluor 546 (A11071, A11018) tagged secondary antibodies used for immunostaining were from Molecular Probes, Invitrogen, USA. cathepsin B assay kit was from immunochemistry, USA and PFD-FDGlu and dextran blue were from Thermo Fisher, USA. Ferric ammonium citrate (FAC) (F5879) and DFO (D9533), bafilomycin A1 (B1793), and other chemicals were from Sigma Aldrich, USA.
+ Open protocol
+ Expand
8

Western Blot Analysis of Hepatitis C Virus Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed twice with phosphate‐buffered saline and harvested in whole‐cell extract lysis buffer (10 mm Tris/HCl pH 7.05, 50 mm NaCl, 1% (w/v) Triton X‐100, 0.5 mΜ PMSF and protease/phospho‐protease inhibitor cocktails by Roche). Protein concentrations were measured with the MicroBCA assay (Thermo Scientific). 40 μg of cell lysates were resolved in 10% (v/v) SDS/PAGE gels and transferred onto nitrocellulose membranes. After blocking, membranes were incubated overnight with primary antibodies. Membranes were then washed and incubated with the appropriate secondary antibody for 90 min at room temperature. Chemiluminescence was detected using Pierce ECL western blotting substrate (Thermo Scientific).
The following antibodies were used in this study: SMAD4 (#9515) by Cell Signaling (Danvers, Massachusetts, USA); TMPRSS6 (ab56180), by Abcam (Cambridge, UK); β‐actin (MAB1501) by Millipore (Burlington, Massachusetts, USA); ferroportin 1 (MTP11) by Alpha Diagnostics (San Antonio, Texas, USA); and STAT3 (sc‐483) and HepC Cag (C7‐50) by Santa Cruz Biotechnology (Dallas, Texas, USA). The polyclonal HCV NS5A and HCV‐1a core antibodies used in this study have been described before [43, 47].
Hepatitis C virus NS5A expression following induction of the cell clones was examined by immunofluorescence with the HCV NS5A polyclonal antibody, as previously described [41].
+ Open protocol
+ Expand
9

Western Blot for Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total cellular proteins were prepared according to our lab’s protocol [51 (link)]. Tested samples were resolved by SDS-PAGE (10% or 12%) and then underwent immunoblotting. Primary antibodies against cdc2 p34 (sc-54, 1:1000), p-cdc2 p34 (sc-12341, 1:1000), cyclin B1 (sc-594, 1:1000), Cdc25C (sc-327, 1:1000), caspase 3 (sc-56053, 1:500), PARP (sc-7150, 1:2000), Mcl-1 (sc-819, 1:500), and DRP1 (sc-101270, 1:500) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA), Vimentin (10336-1-AP, 1:2000), MMP-2 (10373-2-AP, 1:1000), N-cadherin (22018-1-AP, 1:2000), E-cadherin (20874-1-AP, 1:1000), α-SMA (55135-1-AP, 1:1000), and integrin alpha-4 (19676-1-AP, 1:1000) were purchased from Proteintech (Taipei, Taiwan), and β-actin (MAB1501, 1:10,000) was from Merck Millipore (Burlington, MA, USA).
+ Open protocol
+ Expand
10

Comprehensive Antibody Panel for Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
MET Tyr1234&1235 (#3077), NUMA1 Ser395 (#3429), phospho‐Ser/Thr‐Gln‐Gly (#6966), phospho‐Ser‐Gln (#9607), phospho‐Thr(Asp/Glu)X(Asp/Glu) (#BL4176), phospho‐Thr‐X‐Arg (#2351), CHEK1 Ser345 (#2341), CHEK1 (2G1D5; #2360S), p90RSK Ser380 (#9335), PathScan® (Cell Signaling Technology) Multiplex Western Cocktail I [phospho‐p90RSK, phospho‐Akt, phospho‐p44/42 MAPK (Erk1/2), phospho‐S6; #5301], cleaved caspase‐8 (Asp391; #9496), cleaved caspase‐3 (Asp175; #9661), 53BP1 (#4937), ACIN1 (#4934), cdc2 (#9116T), cell cycle‐dependent kinase 2 (CDK2; #2546T), H2AX (#7631S), 11 (#8967), SMC3 (#5696), and MET (#8198S and #4560) antibodies were all obtained from Cell Signaling Technology (Danvers, MA, USA). Histone H2AX Ser139 (#05‐636), ATM Ser1981 (#05‐740), histone H3 Ser10 (#06‐570), and β‐actin (#MAB1501) antibodies were obtained from Merck Millipore Corporation (Darmstadt, Germany). TIF1B (KAP1) Ser824 (#A300‐767A) antibody was purchased from Bethyl Laboratories, Inc. (Montgomery, TX, USA). SMC3 Ser1083 (#NB100‐653) and ATM (#NB100‐309) antibodies were obtained from Novus Biologicals (Littleton, CO, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!